RNA–Protein interactions for RNA: ENSMUST00000214204.1

Chrna3-202, Transcript of Neuronal acetylcholine receptor subunit alpha-3, mousemouse

TSL 1 (best) BASIC

Gene Chrna3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3-202ENSMUST00000214204 Krtap3-1A2A591 98 aa7.26□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Ndufb1P0DN34 57 aa7.26□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Krtap19-1Q925H2 87 aa7.25□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Prm1P02319 51 aa7.25□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Limd2Q8BGB5 128 aa7.25□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Gm7735D3YX18 52 aa7.24□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Krtap1-3A2A588 173 aa7.23□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Krtap19-3Q925H6 87 aa7.23□□□□□ -1.25
Chrna3-202ENSMUST00000214204 ZanO88799 5376 aa7.21□□□□□ -1.25
Chrna3-202ENSMUST00000214204 Gm10382Q3V0T5 144 aa7.21□□□□□ -1.25
Chrna3-202ENSMUST00000214204 4932415D10RikA0A1W2P6U8 4986 aa7.21□□□□□ -1.26
Chrna3-202ENSMUST00000214204 Gm17606F6ZL36 78 aa7.2□□□□□ -1.26
Chrna3-202ENSMUST00000214204 Fam229aB2KGE5 128 aa7.16□□□□□ -1.26
Chrna3-202ENSMUST00000214204 Krtap1-5A2A590 122 aa7.11□□□□□ -1.27
Chrna3-202ENSMUST00000214204 4933415A04RikQ9D443 101 aa7.11□□□□□ -1.27
Chrna3-202ENSMUST00000214204 LorP18165 486 aa7.09□□□□□ -1.27
Chrna3-202ENSMUST00000214204 Sec61gP60060 68 aa7.08□□□□□ -1.28
Chrna3-202ENSMUST00000214204 Gm19402J3QJV4 266 aa7.06□□□□□ -1.28
Chrna3-202ENSMUST00000214204 Gm10337F7DEP7 55 aa7.01□□□□□ -1.29
Chrna3-202ENSMUST00000214204 Sox16Q62247 57 aa6.98□□□□□ -1.29
Chrna3-202ENSMUST00000214204 Fat4Q2PZL6 4981 aa6.98□□□□□ -1.29
Chrna3-202ENSMUST00000214204 H2al1kJ3QP08 105 aa6.96□□□□□ -1.3
Chrna3-202ENSMUST00000214204 H2al1mQ9DAD9 105 aa6.96□□□□□ -1.3
Chrna3-202ENSMUST00000214204 Gm20537G3UYK7 97 aa6.93□□□□□ -1.3
Chrna3-202ENSMUST00000214204 BC029722A0A0N4SW31 51 aa6.92□□□□□ -1.3
Chrna3-202ENSMUST00000214204 1700042G07RikB1AUF7 90 aa6.92□□□□□ -1.3
Chrna3-202ENSMUST00000214204 Gm9955Q8CEJ8 102 aa6.89□□□□□ -1.31
Chrna3-202ENSMUST00000214204 Rnf213E9Q555 5152 aaKnown RBP6.88□□□□□ -1.31
Chrna3-202ENSMUST00000214204 SvipQ3UZP4 77 aa6.86□□□□□ -1.31
Chrna3-202ENSMUST00000214204 Krtap1-4Q3V2D6 188 aa6.85□□□□□ -1.31
Chrna3-202ENSMUST00000214204 Ndufs5Q99LY9 106 aa6.85□□□□□ -1.31
Chrna3-202ENSMUST00000214204 Gm3646F6S692 53 aa6.85□□□□□ -1.31
Chrna3-202ENSMUST00000214204 Gm19426M0QWC7 77 aa6.83□□□□□ -1.32
Chrna3-202ENSMUST00000214204 Gm3880A0A1B0GSB3 72 aa6.75□□□□□ -1.33
Chrna3-202ENSMUST00000214204 Spink7Q6IE32 76 aa6.7□□□□□ -1.34
Chrna3-202ENSMUST00000214204 Lce1jD3YUU5 139 aa6.69□□□□□ -1.34
Chrna3-202ENSMUST00000214204 SspoQ8CG65 4998 aa6.61□□□□□ -1.35
Chrna3-202ENSMUST00000214204 Krtap17-1A2A5X6 109 aa6.61□□□□□ -1.35
Chrna3-202ENSMUST00000214204 B930094E09RikQ8C4T2 136 aa6.59□□□□□ -1.35
Chrna3-202ENSMUST00000214204 Krtap12-1Q9Z287 130 aa6.58□□□□□ -1.36
Chrna3-202ENSMUST00000214204 Gm10061D3Z714 54 aa6.56□□□□□ -1.36
Chrna3-202ENSMUST00000214204 Sprr2a3Q4KL71 83 aa6.52□□□□□ -1.37
Chrna3-202ENSMUST00000214204 Sprr2a1Q9CQK8 83 aa6.52□□□□□ -1.37
Chrna3-202ENSMUST00000214204 Gm17402F6Z0L5 76 aa6.49□□□□□ -1.37
Chrna3-202ENSMUST00000214204 CriptO70333 101 aa6.49□□□□□ -1.37
Chrna3-202ENSMUST00000214204 Pla2g10Q9QXX3 151 aa6.47□□□□□ -1.37
Chrna3-202ENSMUST00000214204 Krtap19-9aF8WH65 55 aa6.46□□□□□ -1.38
Chrna3-202ENSMUST00000214204 Krtap19-2Q925I0 141 aa6.44□□□□□ -1.38
Chrna3-202ENSMUST00000214204 Krtap9-5A2A5X3 358 aa6.44□□□□□ -1.38
Chrna3-202ENSMUST00000214204 Prm2P07978 107 aa6.42□□□□□ -1.38
Chrna3-202ENSMUST00000214204 Gm21887J3QQ04 176 aa6.37□□□□□ -1.39
Chrna3-202ENSMUST00000214204 Gm12216A0A1W2P827 62 aa6.36□□□□□ -1.39
Chrna3-202ENSMUST00000214204 Romo1P60603 79 aa6.3□□□□□ -1.4
Chrna3-202ENSMUST00000214204 Gm11569B1AQB1 180 aa6.28□□□□□ -1.4
Chrna3-202ENSMUST00000214204 Lce1iQ9D6P5 149 aa6.27□□□□□ -1.41
Chrna3-202ENSMUST00000214204 Gm19668J3QMD1 248 aa6.2□□□□□ -1.42
Chrna3-202ENSMUST00000214204 Lce1a2Q9D1K4 149 aa6.2□□□□□ -1.42
Chrna3-202ENSMUST00000214204 Muc5bE9Q5I3 4800 aa6.17□□□□□ -1.42
Chrna3-202ENSMUST00000214204 Camk2n1Q6QWF9 78 aa6.11□□□□□ -1.43
Chrna3-202ENSMUST00000214204 Gm6358A0A087WPH4 74 aa6.1□□□□□ -1.43
Chrna3-202ENSMUST00000214204 Mt2P02798 61 aa5.94□□□□□ -1.46
Chrna3-202ENSMUST00000214204 Mdn1A2ANY6 5589 aaKnown RBP5.88□□□□□ -1.47
Chrna3-202ENSMUST00000214204 Krtap8-1O08633 61 aa5.85□□□□□ -1.47
Chrna3-202ENSMUST00000214204 Krtap19-9bQ99NG9 58 aa5.82□□□□□ -1.48
Chrna3-202ENSMUST00000214204 Krtap4-2B1AQ85 167 aa5.79□□□□□ -1.48
Chrna3-202ENSMUST00000214204 Krtap7-1Q9D3I6 87 aa5.79□□□□□ -1.48
Chrna3-202ENSMUST00000214204 Lce1gQ9D195 139 aa5.78□□□□□ -1.48
Chrna3-202ENSMUST00000214204 Krtap4-6Q3V4B7 195 aa5.77□□□□□ -1.49
Chrna3-202ENSMUST00000214204 Gm11555B1AQ89 175 aa5.73□□□□□ -1.49
Chrna3-202ENSMUST00000214204 Krtap9-3Q3V2C1 136 aa5.66□□□□□ -1.5
Chrna3-202ENSMUST00000214204 Krtap4-1Q3UUY3 169 aa5.65□□□□□ -1.51
Chrna3-202ENSMUST00000214204 Syne2Q6ZWQ0 6874 aaKnown RBP5.64□□□□□ -1.51
Chrna3-202ENSMUST00000214204 Gm11596B1AQB0 205 aa5.63□□□□□ -1.51
Chrna3-202ENSMUST00000214204 Gm40193A0A1B0GT39 78 aa5.59□□□□□ -1.51
Chrna3-202ENSMUST00000214204 Krtap22-2J3QNX6 67 aa5.59□□□□□ -1.51
Chrna3-202ENSMUST00000214204 Lce1hQ9D6R3 140 aa5.57□□□□□ -1.52
Chrna3-202ENSMUST00000214204 Gm11562A0PK51 136 aa5.53□□□□□ -1.52
Chrna3-202ENSMUST00000214204 Mp68P56379 58 aa5.52□□□□□ -1.53
Chrna3-202ENSMUST00000214204 Tnp1P10856 55 aa5.48□□□□□ -1.53
Chrna3-202ENSMUST00000214204 Gm11564A2A4L9 201 aa5.47□□□□□ -1.53
Chrna3-202ENSMUST00000214204 Gm11563B1AQ90 168 aa5.47□□□□□ -1.53
Chrna3-202ENSMUST00000214204 Gm11595B1AQA7 289 aa5.47□□□□□ -1.53
Chrna3-202ENSMUST00000214204 Krtap4-8B1AQA8 209 aa5.47□□□□□ -1.53
Chrna3-202ENSMUST00000214204 Mt4P47945 62 aa5.36□□□□□ -1.55
Chrna3-202ENSMUST00000214204 Fsip2A2ARZ3 6995 aa5.35□□□□□ -1.55
Chrna3-202ENSMUST00000214204 Krtap4-9B1AQA9 244 aa5.34□□□□□ -1.55
Chrna3-202ENSMUST00000214204 Gm38119A0A0A6YX29 146 aa5.21□□□□□ -1.58
Chrna3-202ENSMUST00000214204 Gm10272F7CZ33 110 aa5.19□□□□□ -1.58
Chrna3-202ENSMUST00000214204 2310046K23RikA0A0A6YVW6 87 aa5.18□□□□□ -1.58
Chrna3-202ENSMUST00000214204 Lce1bQ9D149 137 aa5.17□□□□□ -1.58
Chrna3-202ENSMUST00000214204 Krtap4-13Q9D7P3 165 aa5.17□□□□□ -1.58
Chrna3-202ENSMUST00000214204 2300003K06RikA2A4M0 262 aa5.06□□□□□ -1.6
Chrna3-202ENSMUST00000214204 Krtap4-7Q9D732 168 aa5.05□□□□□ -1.6
Chrna3-202ENSMUST00000214204 Sprr2kO70562 68 aa5.03□□□□□ -1.6
Chrna3-202ENSMUST00000214204 Syne1Q6ZWR6 8799 aa5.02□□□□□ -1.61
Chrna3-202ENSMUST00000214204 Ndufaf8A2AMZ4 74 aa4.88□□□□□ -1.63
Chrna3-202ENSMUST00000214204 Lce3bQ9CQM7 98 aa4.87□□□□□ -1.63
Chrna3-202ENSMUST00000214204 Lce1dQ9D731 133 aa4.87□□□□□ -1.63
Chrna3-202ENSMUST00000214204 Lce1lQ9D1G7 135 aa4.85□□□□□ -1.63
Chrna3-202ENSMUST00000214204 Gm20538F6Z9R1 75 aa4.84□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms