RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 Cox6b2Q80ZN9 88 aa12.28□□□□□ -0.44
Ssbp4-205ENSMUST00000210369 Sec61gP60060 68 aa12.09□□□□□ -0.47
Ssbp4-205ENSMUST00000210369 Sec61bQ9CQS8 96 aaKnown RBP12.09□□□□□ -0.47
Ssbp4-205ENSMUST00000210369 Hmcn2A2AJ76 5100 aa12.07□□□□□ -0.48
Ssbp4-205ENSMUST00000210369 4932415D10RikA0A1W2P6U8 4986 aa12.03□□□□□ -0.48
Ssbp4-205ENSMUST00000210369 Gm17606F6ZL36 78 aa12□□□□□ -0.49
Ssbp4-205ENSMUST00000210369 Ubr4A2AN08 5180 aa11.98□□□□□ -0.49
Ssbp4-205ENSMUST00000210369 2210017I01RikA0A0A6YVV1 95 aa11.97□□□□□ -0.49
Ssbp4-205ENSMUST00000210369 2310057N15RikQ9D6T8 200 aa11.86□□□□□ -0.51
Ssbp4-205ENSMUST00000210369 Krtap3-1A2A591 98 aa11.81□□□□□ -0.52
Ssbp4-205ENSMUST00000210369 Gm3646F6S692 53 aa11.81□□□□□ -0.52
Ssbp4-205ENSMUST00000210369 Gm10382Q3V0T5 144 aa11.75□□□□□ -0.53
Ssbp4-205ENSMUST00000210369 Gm9955Q8CEJ8 102 aa11.71□□□□□ -0.54
Ssbp4-205ENSMUST00000210369 Krtap1-3A2A588 173 aa11.68□□□□□ -0.54
Ssbp4-205ENSMUST00000210369 Ndufs5Q99LY9 106 aa11.67□□□□□ -0.54
Ssbp4-205ENSMUST00000210369 Krtap13-1Q8K198 168 aa11.65□□□□□ -0.55
Ssbp4-205ENSMUST00000210369 Fam229aB2KGE5 128 aa11.58□□□□□ -0.56
Ssbp4-205ENSMUST00000210369 Crct1Q6PAI5 102 aa11.58□□□□□ -0.56
Ssbp4-205ENSMUST00000210369 Gm20537G3UYK7 97 aa11.56□□□□□ -0.56
Ssbp4-205ENSMUST00000210369 Krtap1-5A2A590 122 aa11.52□□□□□ -0.57
Ssbp4-205ENSMUST00000210369 Krtap16-3Q8C1I6 86 aa11.49□□□□□ -0.57
Ssbp4-205ENSMUST00000210369 ZanO88799 5376 aa11.48□□□□□ -0.57
Ssbp4-205ENSMUST00000210369 BC029722A0A0N4SW31 51 aa11.45□□□□□ -0.58
Ssbp4-205ENSMUST00000210369 Pla2g10Q9QXX3 151 aa11.41□□□□□ -0.58
Ssbp4-205ENSMUST00000210369 Krtap19-1Q925H2 87 aa11.4□□□□□ -0.58
Ssbp4-205ENSMUST00000210369 LorP18165 486 aa11.37□□□□□ -0.59
Ssbp4-205ENSMUST00000210369 Krtap19-3Q925H6 87 aa11.35□□□□□ -0.59
Ssbp4-205ENSMUST00000210369 Gm10318A0A1W2P728 225 aa11.32□□□□□ -0.6
Ssbp4-205ENSMUST00000210369 Fat4Q2PZL6 4981 aa11.32□□□□□ -0.6
Ssbp4-205ENSMUST00000210369 1700042G07RikB1AUF7 90 aa11.25□□□□□ -0.61
Ssbp4-205ENSMUST00000210369 Gm3880A0A1B0GSB3 72 aa11.22□□□□□ -0.61
Ssbp4-205ENSMUST00000210369 Rnf213E9Q555 5152 aaKnown RBP11.14□□□□□ -0.63
Ssbp4-205ENSMUST00000210369 Gm17402F6Z0L5 76 aa11.11□□□□□ -0.63
Ssbp4-205ENSMUST00000210369 Gm19402J3QJV4 266 aa11.09□□□□□ -0.63
Ssbp4-205ENSMUST00000210369 Gm19426M0QWC7 77 aa11.08□□□□□ -0.64
Ssbp4-205ENSMUST00000210369 Krtap1-4Q3V2D6 188 aa11.01□□□□□ -0.65
Ssbp4-205ENSMUST00000210369 B930094E09RikQ8C4T2 136 aa10.98□□□□□ -0.65
Ssbp4-205ENSMUST00000210369 Gm10061D3Z714 54 aa10.95□□□□□ -0.66
Ssbp4-205ENSMUST00000210369 Gm12216A0A1W2P827 62 aa10.91□□□□□ -0.66
Ssbp4-205ENSMUST00000210369 CriptO70333 101 aa10.9□□□□□ -0.66
Ssbp4-205ENSMUST00000210369 Spink7Q6IE32 76 aa10.82□□□□□ -0.68
Ssbp4-205ENSMUST00000210369 Romo1P60603 79 aa10.81□□□□□ -0.68
Ssbp4-205ENSMUST00000210369 Sprr2a3Q4KL71 83 aa10.75□□□□□ -0.69
Ssbp4-205ENSMUST00000210369 Sprr2a1Q9CQK8 83 aa10.75□□□□□ -0.69
Ssbp4-205ENSMUST00000210369 SspoQ8CG65 4998 aa10.68□□□□□ -0.7
Ssbp4-205ENSMUST00000210369 Gm11569B1AQB1 180 aa10.67□□□□□ -0.7
Ssbp4-205ENSMUST00000210369 Gm11562A0PK51 136 aa10.49□□□□□ -0.73
Ssbp4-205ENSMUST00000210369 Gm21887J3QQ04 176 aa10.44□□□□□ -0.74
Ssbp4-205ENSMUST00000210369 Krtap12-1Q9Z287 130 aa10.43□□□□□ -0.74
Ssbp4-205ENSMUST00000210369 Lce1jD3YUU5 139 aa10.42□□□□□ -0.74
Ssbp4-205ENSMUST00000210369 Krtap19-9aF8WH65 55 aa10.38□□□□□ -0.75
Ssbp4-205ENSMUST00000210369 Krtap4-2B1AQ85 167 aa10.35□□□□□ -0.75
Ssbp4-205ENSMUST00000210369 Lce1gQ9D195 139 aa10.23□□□□□ -0.77
Ssbp4-205ENSMUST00000210369 Gm19668J3QMD1 248 aa10.17□□□□□ -0.78
Ssbp4-205ENSMUST00000210369 Krtap17-1A2A5X6 109 aa10.16□□□□□ -0.78
Ssbp4-205ENSMUST00000210369 Camk2n1Q6QWF9 78 aa10.16□□□□□ -0.78
Ssbp4-205ENSMUST00000210369 Krtap9-5A2A5X3 358 aa10.13□□□□□ -0.79
Ssbp4-205ENSMUST00000210369 Krtap19-2Q925I0 141 aa10.12□□□□□ -0.79
Ssbp4-205ENSMUST00000210369 Prm2P07978 107 aa10.07□□□□□ -0.8
Ssbp4-205ENSMUST00000210369 Gm11555B1AQ89 175 aa9.96□□□□□ -0.81
Ssbp4-205ENSMUST00000210369 Syne2Q6ZWQ0 6874 aaKnown RBP9.94□□□□□ -0.82
Ssbp4-205ENSMUST00000210369 Gm40193A0A1B0GT39 78 aa9.91□□□□□ -0.82
Ssbp4-205ENSMUST00000210369 Muc5bE9Q5I3 4800 aa9.9□□□□□ -0.82
Ssbp4-205ENSMUST00000210369 Gm11596B1AQB0 205 aa9.84□□□□□ -0.83
Ssbp4-205ENSMUST00000210369 Krtap7-1Q9D3I6 87 aa9.82□□□□□ -0.84
Ssbp4-205ENSMUST00000210369 Krtap4-6Q3V4B7 195 aa9.79□□□□□ -0.84
Ssbp4-205ENSMUST00000210369 Lce1iQ9D6P5 149 aa9.77□□□□□ -0.84
Ssbp4-205ENSMUST00000210369 Mp68P56379 58 aa9.68□□□□□ -0.86
Ssbp4-205ENSMUST00000210369 Gm6358A0A087WPH4 74 aa9.67□□□□□ -0.86
Ssbp4-205ENSMUST00000210369 Lce1a2Q9D1K4 149 aa9.66□□□□□ -0.86
Ssbp4-205ENSMUST00000210369 Krtap8-1O08633 61 aa9.63□□□□□ -0.87
Ssbp4-205ENSMUST00000210369 Krtap4-1Q3UUY3 169 aa9.61□□□□□ -0.87
Ssbp4-205ENSMUST00000210369 Mdn1A2ANY6 5589 aaKnown RBP9.6□□□□□ -0.87
Ssbp4-205ENSMUST00000210369 Krtap19-9bQ99NG9 58 aa9.53□□□□□ -0.88
Ssbp4-205ENSMUST00000210369 Gm11564A2A4L9 201 aa9.39□□□□□ -0.91
Ssbp4-205ENSMUST00000210369 Gm11563B1AQ90 168 aa9.39□□□□□ -0.91
Ssbp4-205ENSMUST00000210369 Gm11595B1AQA7 289 aa9.39□□□□□ -0.91
Ssbp4-205ENSMUST00000210369 Krtap4-8B1AQA8 209 aa9.39□□□□□ -0.91
Ssbp4-205ENSMUST00000210369 Tnp1P10856 55 aa9.37□□□□□ -0.91
Ssbp4-205ENSMUST00000210369 Mt2P02798 61 aa9.31□□□□□ -0.92
Ssbp4-205ENSMUST00000210369 Krtap4-9B1AQA9 244 aa9.11□□□□□ -0.95
Ssbp4-205ENSMUST00000210369 Gm20538F6Z9R1 75 aa9.01□□□□□ -0.97
Ssbp4-205ENSMUST00000210369 Mt4P47945 62 aa9.01□□□□□ -0.97
Ssbp4-205ENSMUST00000210369 Krtap9-3Q3V2C1 136 aa8.97□□□□□ -0.97
Ssbp4-205ENSMUST00000210369 2310046K23RikA0A0A6YVW6 87 aa8.89□□□□□ -0.99
Ssbp4-205ENSMUST00000210369 Fsip2A2ARZ3 6995 aa8.87□□□□□ -0.99
Ssbp4-205ENSMUST00000210369 Krtap22-2J3QNX6 67 aa8.82□□□□□ -1
Ssbp4-205ENSMUST00000210369 Krtap4-13Q9D7P3 165 aa8.77□□□□□ -1.01
Ssbp4-205ENSMUST00000210369 Lce1hQ9D6R3 140 aa8.76□□□□□ -1.01
Ssbp4-205ENSMUST00000210369 Lce1bQ9D149 137 aa8.71□□□□□ -1.01
Ssbp4-205ENSMUST00000210369 Krtap6-3A0A087WQL6 57 aa8.64□□□□□ -1.03
Ssbp4-205ENSMUST00000210369 Sprr2kO70562 68 aa8.64□□□□□ -1.03
Ssbp4-205ENSMUST00000210369 Ndufaf8A2AMZ4 74 aa8.62□□□□□ -1.03
Ssbp4-205ENSMUST00000210369 Gm38119A0A0A6YX29 146 aa8.56□□□□□ -1.04
Ssbp4-205ENSMUST00000210369 2300003K06RikA2A4M0 262 aa8.5□□□□□ -1.05
Ssbp4-205ENSMUST00000210369 Lce1lQ9D1G7 135 aa8.38□□□□□ -1.07
Ssbp4-205ENSMUST00000210369 Krtap4-7Q9D732 168 aa8.36□□□□□ -1.07
Ssbp4-205ENSMUST00000210369 Gm10272F7CZ33 110 aa8.18□□□□□ -1.1
Ssbp4-205ENSMUST00000210369 Sprr2gO70558 76 aa8.08□□□□□ -1.12
Ssbp4-205ENSMUST00000210369 Gm11938Q9D3H4 131 aa7.98□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms