RNA–Protein interactions for RNA: ENSMUST00000170957.2

Ggps1-201, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ggps1, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-201ENSMUST00000170957 Lrp2A2ARV4 4660 aa4.81□□□□□ -1.64
Ggps1-201ENSMUST00000170957 Camk2n1Q6QWF9 78 aa4.8□□□□□ -1.64
Ggps1-201ENSMUST00000170957 SacsQ9JLC8 4582 aa4.79□□□□□ -1.64
Ggps1-201ENSMUST00000170957 Hectd4E9Q2E4 4418 aa4.78□□□□□ -1.64
Ggps1-201ENSMUST00000170957 Pla2g10Q9QXX3 151 aa4.77□□□□□ -1.65
Ggps1-201ENSMUST00000170957 Krtap3-2Q9D638 99 aa4.77□□□□□ -1.65
Ggps1-201ENSMUST00000170957 Krtap3-3Q9D7P0 99 aa4.77□□□□□ -1.65
Ggps1-201ENSMUST00000170957 2210017I01RikA0A0A6YVV1 95 aa4.77□□□□□ -1.65
Ggps1-201ENSMUST00000170957 Romo1P60603 79 aa4.76□□□□□ -1.65
Ggps1-201ENSMUST00000170957 Pkd1O08852 4293 aa4.74□□□□□ -1.65
Ggps1-201ENSMUST00000170957 Abca13Q5SSE9 5034 aa4.72□□□□□ -1.65
Ggps1-201ENSMUST00000170957 Gm18596A0A1W2P860 280 aa4.7□□□□□ -1.66
Ggps1-201ENSMUST00000170957 Dnah8Q91XQ0 4731 aa4.66□□□□□ -1.66
Ggps1-201ENSMUST00000170957 1700042G07RikB1AUF7 90 aa4.65□□□□□ -1.66
Ggps1-201ENSMUST00000170957 Krtap28-13A0A087WQP5 138 aa4.64□□□□□ -1.67
Ggps1-201ENSMUST00000170957 Gm20537G3UYK7 97 aa4.63□□□□□ -1.67
Ggps1-201ENSMUST00000170957 Krtap13-1Q8K198 168 aa4.63□□□□□ -1.67
Ggps1-201ENSMUST00000170957 Vps13bQ80TY5 3993 aa4.62□□□□□ -1.67
Ggps1-201ENSMUST00000170957 Fat2Q5F226 4351 aa4.59□□□□□ -1.67
Ggps1-201ENSMUST00000170957 Dnhd1D3Z2X2 4750 aa4.59□□□□□ -1.67
Ggps1-201ENSMUST00000170957 Lce1mQ9CR91 182 aa4.58□□□□□ -1.68
Ggps1-201ENSMUST00000170957 Kmt2cQ8BRH4 4903 aa4.57□□□□□ -1.68
Ggps1-201ENSMUST00000170957 Gm21887J3QQ04 176 aa4.56□□□□□ -1.68
Ggps1-201ENSMUST00000170957 Gm20538F6Z9R1 75 aa4.56□□□□□ -1.68
Ggps1-201ENSMUST00000170957 B930094E09RikQ8C4T2 136 aa4.55□□□□□ -1.68
Ggps1-201ENSMUST00000170957 PcloQ9QYX7 5068 aa4.55□□□□□ -1.68
Ggps1-201ENSMUST00000170957 Gm6217A0A1Y7VJK9 128 aa4.52□□□□□ -1.69
Ggps1-201ENSMUST00000170957 LorP18165 486 aa4.51□□□□□ -1.69
Ggps1-201ENSMUST00000170957 Birc6O88738 4882 aa4.51□□□□□ -1.69
Ggps1-201ENSMUST00000170957 A030005L19RikA0A1Y7VIU2 113 aa4.51□□□□□ -1.69
Ggps1-201ENSMUST00000170957 Gm17402F6Z0L5 76 aa4.51□□□□□ -1.69
Ggps1-201ENSMUST00000170957 Krtap3-1A2A591 98 aa4.5□□□□□ -1.69
Ggps1-201ENSMUST00000170957 Herc1E9PZP8 4859 aa4.49□□□□□ -1.69
Ggps1-201ENSMUST00000170957 A030005K14RikA0A1Y7VNY1 122 aa4.47□□□□□ -1.69
Ggps1-201ENSMUST00000170957 Pkhd1l1Q80ZA4 4249 aa4.46□□□□□ -1.7
Ggps1-201ENSMUST00000170957 Gm7544A0A1Y7VJ58 118 aa4.42□□□□□ -1.7
Ggps1-201ENSMUST00000170957 A0A1Y7VJ07 166 aa4.4□□□□□ -1.71
Ggps1-201ENSMUST00000170957 Pkhd1E9PZ36 4059 aa4.39□□□□□ -1.71
Ggps1-201ENSMUST00000170957 Ubr4A2AN08 5180 aa4.38□□□□□ -1.71
Ggps1-201ENSMUST00000170957 Krtap1-5A2A590 122 aa4.36□□□□□ -1.71
Ggps1-201ENSMUST00000170957 Gm40193A0A1B0GT39 78 aa4.33□□□□□ -1.72
Ggps1-201ENSMUST00000170957 Krtap16-3Q8C1I6 86 aa4.31□□□□□ -1.72
Ggps1-201ENSMUST00000170957 Tnp1P10856 55 aa4.3□□□□□ -1.72
Ggps1-201ENSMUST00000170957 Gm19402J3QJV4 266 aa4.29□□□□□ -1.72
Ggps1-201ENSMUST00000170957 Krtap19-3Q925H6 87 aa4.28□□□□□ -1.72
Ggps1-201ENSMUST00000170957 Gm19668J3QMD1 248 aa4.26□□□□□ -1.73
Ggps1-201ENSMUST00000170957 Krtap19-1Q925H2 87 aa4.22□□□□□ -1.73
Ggps1-201ENSMUST00000170957 Ush2AQ2QI47 5193 aa4.22□□□□□ -1.73
Ggps1-201ENSMUST00000170957 Gm7735D3YX18 52 aa4.2□□□□□ -1.74
Ggps1-201ENSMUST00000170957 Prm1P02319 51 aa4.2□□□□□ -1.74
Ggps1-201ENSMUST00000170957 4932415D10RikA0A1W2P6U8 4986 aa4.2□□□□□ -1.74
Ggps1-201ENSMUST00000170957 Krtap1-3A2A588 173 aa4.19□□□□□ -1.74
Ggps1-201ENSMUST00000170957 Krtap1-4Q3V2D6 188 aa4.19□□□□□ -1.74
Ggps1-201ENSMUST00000170957 Sprr2a3Q4KL71 83 aa4.14□□□□□ -1.75
Ggps1-201ENSMUST00000170957 Gm9789Q8BIG3 52 aa4.14□□□□□ -1.75
Ggps1-201ENSMUST00000170957 Sprr2a1Q9CQK8 83 aa4.14□□□□□ -1.75
Ggps1-201ENSMUST00000170957 Prm2P07978 107 aa4.14□□□□□ -1.75
Ggps1-201ENSMUST00000170957 Krtap19-9aF8WH65 55 aa4.13□□□□□ -1.75
Ggps1-201ENSMUST00000170957 ZanO88799 5376 aa4.11□□□□□ -1.75
Ggps1-201ENSMUST00000170957 Krtap12-1Q9Z287 130 aa4.1□□□□□ -1.75
Ggps1-201ENSMUST00000170957 Mdn1A2ANY6 5589 aaKnown RBP4.1□□□□□ -1.75
Ggps1-201ENSMUST00000170957 Fat4Q2PZL6 4981 aa4.08□□□□□ -1.76
Ggps1-201ENSMUST00000170957 Rnf213E9Q555 5152 aaKnown RBP4.02□□□□□ -1.77
Ggps1-201ENSMUST00000170957 Hmcn2A2AJ76 5100 aa4.02□□□□□ -1.77
Ggps1-201ENSMUST00000170957 Krtap9-5A2A5X3 358 aa4.01□□□□□ -1.77
Ggps1-201ENSMUST00000170957 A030014E15RikA0A1Y7VJV2 120 aa3.98□□□□□ -1.77
Ggps1-201ENSMUST00000170957 Ndufaf8A2AMZ4 74 aa3.98□□□□□ -1.77
Ggps1-201ENSMUST00000170957 Lce1jD3YUU5 139 aa3.98□□□□□ -1.77
Ggps1-201ENSMUST00000170957 Gm10061D3Z714 54 aa3.89□□□□□ -1.79
Ggps1-201ENSMUST00000170957 Krtap19-2Q925I0 141 aa3.88□□□□□ -1.79
Ggps1-201ENSMUST00000170957 Krtap19-9bQ99NG9 58 aa3.87□□□□□ -1.79
Ggps1-201ENSMUST00000170957 Krtap8-1O08633 61 aa3.86□□□□□ -1.79
Ggps1-201ENSMUST00000170957 Krtap17-1A2A5X6 109 aa3.85□□□□□ -1.79
Ggps1-201ENSMUST00000170957 Krtap4-1Q3UUY3 169 aa3.85□□□□□ -1.79
Ggps1-201ENSMUST00000170957 Gm11569B1AQB1 180 aa3.8□□□□□ -1.8
Ggps1-201ENSMUST00000170957 Gm6358A0A087WPH4 74 aa3.77□□□□□ -1.81
Ggps1-201ENSMUST00000170957 Krtap7-1Q9D3I6 87 aa3.77□□□□□ -1.81
Ggps1-201ENSMUST00000170957 Mt2P02798 61 aa3.73□□□□□ -1.81
Ggps1-201ENSMUST00000170957 Sprr2kO70562 68 aa3.69□□□□□ -1.82
Ggps1-201ENSMUST00000170957 Lce1iQ9D6P5 149 aa3.67□□□□□ -1.82
Ggps1-201ENSMUST00000170957 Gm9112A2AI92 75 aa3.66□□□□□ -1.82
Ggps1-201ENSMUST00000170957 4933428G20RikQ9D3X4 101 aa3.65□□□□□ -1.82
Ggps1-201ENSMUST00000170957 Lce1a2Q9D1K4 149 aa3.62□□□□□ -1.83
Ggps1-201ENSMUST00000170957 Krtap4-2B1AQ85 167 aa3.61□□□□□ -1.83
Ggps1-201ENSMUST00000170957 Fsip2A2ARZ3 6995 aa3.61□□□□□ -1.83
Ggps1-201ENSMUST00000170957 Krtap4-6Q3V4B7 195 aa3.59□□□□□ -1.83
Ggps1-201ENSMUST00000170957 Gm11555B1AQ89 175 aa3.59□□□□□ -1.83
Ggps1-201ENSMUST00000170957 Gm11563B1AQ90 168 aa3.58□□□□□ -1.84
Ggps1-201ENSMUST00000170957 Krtap4-7Q9D732 168 aa3.58□□□□□ -1.84
Ggps1-201ENSMUST00000170957 Krtap22-2J3QNX6 67 aa3.58□□□□□ -1.84
Ggps1-201ENSMUST00000170957 Gm38119A0A0A6YX29 146 aa3.55□□□□□ -1.84
Ggps1-201ENSMUST00000170957 Lce1gQ9D195 139 aa3.52□□□□□ -1.85
Ggps1-201ENSMUST00000170957 Muc5bE9Q5I3 4800 aa3.49□□□□□ -1.85
Ggps1-201ENSMUST00000170957 SspoQ8CG65 4998 aa3.48□□□□□ -1.85
Ggps1-201ENSMUST00000170957 Gm10272F7CZ33 110 aa3.47□□□□□ -1.85
Ggps1-201ENSMUST00000170957 Mt4P47945 62 aa3.46□□□□□ -1.86
Ggps1-201ENSMUST00000170957 Syne2Q6ZWQ0 6874 aaKnown RBP3.43□□□□□ -1.86
Ggps1-201ENSMUST00000170957 Gm11596B1AQB0 205 aa3.42□□□□□ -1.86
Ggps1-201ENSMUST00000170957 2310046K23RikA0A0A6YVW6 87 aa3.4□□□□□ -1.86
Ggps1-201ENSMUST00000170957 Sprr2gO70558 76 aa3.4□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms