RNA–Protein interactions for RNA: ENSMUST00000160629.7

Cpsf4-205, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-205ENSMUST00000160629 Uqcr11Q9CPX8 56 aa11.73□□□□□ -0.53
Cpsf4-205ENSMUST00000160629 H2al1bA0A087WP11 105 aa11.71□□□□□ -0.54
Cpsf4-205ENSMUST00000160629 Fam229aB2KGE5 128 aa11.71□□□□□ -0.54
Cpsf4-205ENSMUST00000160629 Fat4Q2PZL6 4981 aa11.7□□□□□ -0.54
Cpsf4-205ENSMUST00000160629 Limd2Q8BGB5 128 aa11.67□□□□□ -0.54
Cpsf4-205ENSMUST00000160629 Ndufb1P0DN34 57 aa11.66□□□□□ -0.54
Cpsf4-205ENSMUST00000160629 Krtap16-3Q8C1I6 86 aa11.6□□□□□ -0.55
Cpsf4-205ENSMUST00000160629 Gm17606F6ZL36 78 aa11.6□□□□□ -0.55
Cpsf4-205ENSMUST00000160629 Krtap13-1Q8K198 168 aa11.58□□□□□ -0.56
Cpsf4-205ENSMUST00000160629 LorP18165 486 aa11.57□□□□□ -0.56
Cpsf4-205ENSMUST00000160629 Krtap19-1Q925H2 87 aa11.53□□□□□ -0.56
Cpsf4-205ENSMUST00000160629 Krtap3-1A2A591 98 aa11.51□□□□□ -0.57
Cpsf4-205ENSMUST00000160629 Krtap19-3Q925H6 87 aa11.48□□□□□ -0.57
Cpsf4-205ENSMUST00000160629 Rnf213E9Q555 5152 aaKnown RBP11.46□□□□□ -0.58
Cpsf4-205ENSMUST00000160629 Krtap1-5A2A590 122 aa11.43□□□□□ -0.58
Cpsf4-205ENSMUST00000160629 Sec61gP60060 68 aa11.4□□□□□ -0.58
Cpsf4-205ENSMUST00000160629 Gm19402J3QJV4 266 aa11.32□□□□□ -0.6
Cpsf4-205ENSMUST00000160629 Gm10318A0A1W2P728 225 aa11.31□□□□□ -0.6
Cpsf4-205ENSMUST00000160629 Gm10382Q3V0T5 144 aa11.31□□□□□ -0.6
Cpsf4-205ENSMUST00000160629 1700042G07RikB1AUF7 90 aa11.28□□□□□ -0.6
Cpsf4-205ENSMUST00000160629 Sox16Q62247 57 aa11.27□□□□□ -0.61
Cpsf4-205ENSMUST00000160629 SvipQ3UZP4 77 aa11.23□□□□□ -0.61
Cpsf4-205ENSMUST00000160629 Gm10061D3Z714 54 aa11.21□□□□□ -0.62
Cpsf4-205ENSMUST00000160629 Gm20537G3UYK7 97 aa11.19□□□□□ -0.62
Cpsf4-205ENSMUST00000160629 BC029722A0A0N4SW31 51 aa11.18□□□□□ -0.62
Cpsf4-205ENSMUST00000160629 Krtap1-4Q3V2D6 188 aa11.15□□□□□ -0.63
Cpsf4-205ENSMUST00000160629 Gm9955Q8CEJ8 102 aa11.08□□□□□ -0.64
Cpsf4-205ENSMUST00000160629 4933415A04RikQ9D443 101 aa11.06□□□□□ -0.64
Cpsf4-205ENSMUST00000160629 Gm19426M0QWC7 77 aa11.02□□□□□ -0.65
Cpsf4-205ENSMUST00000160629 Gm10337F7DEP7 55 aa11.01□□□□□ -0.65
Cpsf4-205ENSMUST00000160629 SspoQ8CG65 4998 aa10.98□□□□□ -0.65
Cpsf4-205ENSMUST00000160629 H2al1kJ3QP08 105 aa10.95□□□□□ -0.66
Cpsf4-205ENSMUST00000160629 H2al1mQ9DAD9 105 aa10.95□□□□□ -0.66
Cpsf4-205ENSMUST00000160629 Gm11569B1AQB1 180 aa10.95□□□□□ -0.66
Cpsf4-205ENSMUST00000160629 Gm11562A0PK51 136 aa10.93□□□□□ -0.66
Cpsf4-205ENSMUST00000160629 Krtap17-1A2A5X6 109 aa10.75□□□□□ -0.69
Cpsf4-205ENSMUST00000160629 CriptO70333 101 aa10.75□□□□□ -0.69
Cpsf4-205ENSMUST00000160629 Krtap4-2B1AQ85 167 aa10.72□□□□□ -0.69
Cpsf4-205ENSMUST00000160629 Gm17402F6Z0L5 76 aa10.67□□□□□ -0.7
Cpsf4-205ENSMUST00000160629 Spink7Q6IE32 76 aa10.67□□□□□ -0.7
Cpsf4-205ENSMUST00000160629 Ndufs5Q99LY9 106 aa10.66□□□□□ -0.7
Cpsf4-205ENSMUST00000160629 Gm3646F6S692 53 aa10.6□□□□□ -0.71
Cpsf4-205ENSMUST00000160629 Lce1gQ9D195 139 aa10.57□□□□□ -0.72
Cpsf4-205ENSMUST00000160629 Krtap12-1Q9Z287 130 aa10.52□□□□□ -0.73
Cpsf4-205ENSMUST00000160629 B930094E09RikQ8C4T2 136 aa10.48□□□□□ -0.73
Cpsf4-205ENSMUST00000160629 Gm3880A0A1B0GSB3 72 aa10.44□□□□□ -0.74
Cpsf4-205ENSMUST00000160629 Lce1jD3YUU5 139 aa10.44□□□□□ -0.74
Cpsf4-205ENSMUST00000160629 Sprr2a3Q4KL71 83 aa10.43□□□□□ -0.74
Cpsf4-205ENSMUST00000160629 Sprr2a1Q9CQK8 83 aa10.43□□□□□ -0.74
Cpsf4-205ENSMUST00000160629 Krtap19-9aF8WH65 55 aa10.4□□□□□ -0.74
Cpsf4-205ENSMUST00000160629 Pla2g10Q9QXX3 151 aa10.33□□□□□ -0.76
Cpsf4-205ENSMUST00000160629 Syne2Q6ZWQ0 6874 aaKnown RBP10.32□□□□□ -0.76
Cpsf4-205ENSMUST00000160629 Gm11555B1AQ89 175 aa10.28□□□□□ -0.76
Cpsf4-205ENSMUST00000160629 Krtap19-2Q925I0 141 aa10.25□□□□□ -0.77
Cpsf4-205ENSMUST00000160629 Krtap9-5A2A5X3 358 aa10.23□□□□□ -0.77
Cpsf4-205ENSMUST00000160629 Muc5bE9Q5I3 4800 aa10.21□□□□□ -0.78
Cpsf4-205ENSMUST00000160629 Gm11596B1AQB0 205 aa10.17□□□□□ -0.78
Cpsf4-205ENSMUST00000160629 Prm2P07978 107 aa10.17□□□□□ -0.78
Cpsf4-205ENSMUST00000160629 Gm12216A0A1W2P827 62 aa10.14□□□□□ -0.79
Cpsf4-205ENSMUST00000160629 Krtap4-6Q3V4B7 195 aa10.07□□□□□ -0.8
Cpsf4-205ENSMUST00000160629 Mdn1A2ANY6 5589 aaKnown RBP10.05□□□□□ -0.8
Cpsf4-205ENSMUST00000160629 Romo1P60603 79 aa10□□□□□ -0.81
Cpsf4-205ENSMUST00000160629 Gm19668J3QMD1 248 aa9.94□□□□□ -0.82
Cpsf4-205ENSMUST00000160629 Gm21887J3QQ04 176 aa9.9□□□□□ -0.83
Cpsf4-205ENSMUST00000160629 Krtap4-1Q3UUY3 169 aa9.89□□□□□ -0.83
Cpsf4-205ENSMUST00000160629 Camk2n1Q6QWF9 78 aa9.81□□□□□ -0.84
Cpsf4-205ENSMUST00000160629 Lce1iQ9D6P5 149 aa9.8□□□□□ -0.84
Cpsf4-205ENSMUST00000160629 Gm6358A0A087WPH4 74 aa9.79□□□□□ -0.84
Cpsf4-205ENSMUST00000160629 Gm11564A2A4L9 201 aa9.66□□□□□ -0.86
Cpsf4-205ENSMUST00000160629 Gm11563B1AQ90 168 aa9.66□□□□□ -0.86
Cpsf4-205ENSMUST00000160629 Gm11595B1AQA7 289 aa9.66□□□□□ -0.86
Cpsf4-205ENSMUST00000160629 Krtap4-8B1AQA8 209 aa9.66□□□□□ -0.86
Cpsf4-205ENSMUST00000160629 Lce1a2Q9D1K4 149 aa9.66□□□□□ -0.86
Cpsf4-205ENSMUST00000160629 Mt2P02798 61 aa9.45□□□□□ -0.9
Cpsf4-205ENSMUST00000160629 Krtap8-1O08633 61 aa9.42□□□□□ -0.9
Cpsf4-205ENSMUST00000160629 Krtap4-9B1AQA9 244 aa9.37□□□□□ -0.91
Cpsf4-205ENSMUST00000160629 Krtap19-9bQ99NG9 58 aa9.37□□□□□ -0.91
Cpsf4-205ENSMUST00000160629 Mt4P47945 62 aa9.24□□□□□ -0.93
Cpsf4-205ENSMUST00000160629 Fsip2A2ARZ3 6995 aa9.23□□□□□ -0.93
Cpsf4-205ENSMUST00000160629 Krtap9-3Q3V2C1 136 aa9.14□□□□□ -0.95
Cpsf4-205ENSMUST00000160629 Gm40193A0A1B0GT39 78 aa9.11□□□□□ -0.95
Cpsf4-205ENSMUST00000160629 Krtap4-13Q9D7P3 165 aa9.02□□□□□ -0.96
Cpsf4-205ENSMUST00000160629 Krtap7-1Q9D3I6 87 aa9.02□□□□□ -0.97
Cpsf4-205ENSMUST00000160629 Krtap22-2J3QNX6 67 aa9□□□□□ -0.97
Cpsf4-205ENSMUST00000160629 Krtap6-3A0A087WQL6 57 aa8.93□□□□□ -0.98
Cpsf4-205ENSMUST00000160629 Lce1bQ9D149 137 aa8.91□□□□□ -0.98
Cpsf4-205ENSMUST00000160629 Tnp1P10856 55 aa8.86□□□□□ -0.99
Cpsf4-205ENSMUST00000160629 Sprr2kO70562 68 aa8.84□□□□□ -0.99
Cpsf4-205ENSMUST00000160629 Mp68P56379 58 aa8.76□□□□□ -1.01
Cpsf4-205ENSMUST00000160629 Gm38119A0A0A6YX29 146 aa8.74□□□□□ -1.01
Cpsf4-205ENSMUST00000160629 2300003K06RikA2A4M0 262 aa8.71□□□□□ -1.02
Cpsf4-205ENSMUST00000160629 Lce1lQ9D1G7 135 aa8.64□□□□□ -1.03
Cpsf4-205ENSMUST00000160629 Lce1hQ9D6R3 140 aa8.59□□□□□ -1.03
Cpsf4-205ENSMUST00000160629 Krtap4-7Q9D732 168 aa8.58□□□□□ -1.04
Cpsf4-205ENSMUST00000160629 2310046K23RikA0A0A6YVW6 87 aa8.36□□□□□ -1.07
Cpsf4-205ENSMUST00000160629 Sprr2gO70558 76 aa8.28□□□□□ -1.08
Cpsf4-205ENSMUST00000160629 Lce1a1Q9CQH5 143 aa8.2□□□□□ -1.1
Cpsf4-205ENSMUST00000160629 Krtap20-2E9Q0A8 60 aa8.16□□□□□ -1.1
Cpsf4-205ENSMUST00000160629 Gm10272F7CZ33 110 aa8.13□□□□□ -1.11
Cpsf4-205ENSMUST00000160629 Lce1dQ9D731 133 aa7.98□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 91.1 ms