RNA–Protein interactions for RNA: ENSMUST00000160629.7

Cpsf4-205, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-205ENSMUST00000160629 Uqcr11Q9CPX8 56 aa11,73□□□□□ -0,53
Cpsf4-205ENSMUST00000160629 H2al1bA0A087WP11 105 aa11,71□□□□□ -0,54
Cpsf4-205ENSMUST00000160629 Fam229aB2KGE5 128 aa11,71□□□□□ -0,54
Cpsf4-205ENSMUST00000160629 Fat4Q2PZL6 4981 aa11,7□□□□□ -0,54
Cpsf4-205ENSMUST00000160629 Limd2Q8BGB5 128 aa11,67□□□□□ -0,54
Cpsf4-205ENSMUST00000160629 Ndufb1P0DN34 57 aa11,66□□□□□ -0,54
Cpsf4-205ENSMUST00000160629 Krtap16-3Q8C1I6 86 aa11,6□□□□□ -0,55
Cpsf4-205ENSMUST00000160629 Gm17606F6ZL36 78 aa11,6□□□□□ -0,55
Cpsf4-205ENSMUST00000160629 Krtap13-1Q8K198 168 aa11,58□□□□□ -0,56
Cpsf4-205ENSMUST00000160629 LorP18165 486 aa11,57□□□□□ -0,56
Cpsf4-205ENSMUST00000160629 Krtap19-1Q925H2 87 aa11,53□□□□□ -0,56
Cpsf4-205ENSMUST00000160629 Krtap3-1A2A591 98 aa11,51□□□□□ -0,57
Cpsf4-205ENSMUST00000160629 Krtap19-3Q925H6 87 aa11,48□□□□□ -0,57
Cpsf4-205ENSMUST00000160629 Rnf213E9Q555 5152 aaKnown RBP11,46□□□□□ -0,58
Cpsf4-205ENSMUST00000160629 Krtap1-5A2A590 122 aa11,43□□□□□ -0,58
Cpsf4-205ENSMUST00000160629 Sec61gP60060 68 aa11,4□□□□□ -0,58
Cpsf4-205ENSMUST00000160629 Gm19402J3QJV4 266 aa11,32□□□□□ -0,6
Cpsf4-205ENSMUST00000160629 Gm10318A0A1W2P728 225 aa11,31□□□□□ -0,6
Cpsf4-205ENSMUST00000160629 Gm10382Q3V0T5 144 aa11,31□□□□□ -0,6
Cpsf4-205ENSMUST00000160629 1700042G07RikB1AUF7 90 aa11,28□□□□□ -0,6
Cpsf4-205ENSMUST00000160629 Sox16Q62247 57 aa11,27□□□□□ -0,61
Cpsf4-205ENSMUST00000160629 SvipQ3UZP4 77 aa11,23□□□□□ -0,61
Cpsf4-205ENSMUST00000160629 Gm10061D3Z714 54 aa11,21□□□□□ -0,62
Cpsf4-205ENSMUST00000160629 Gm20537G3UYK7 97 aa11,19□□□□□ -0,62
Cpsf4-205ENSMUST00000160629 BC029722A0A0N4SW31 51 aa11,18□□□□□ -0,62
Cpsf4-205ENSMUST00000160629 Krtap1-4Q3V2D6 188 aa11,15□□□□□ -0,63
Cpsf4-205ENSMUST00000160629 Gm9955Q8CEJ8 102 aa11,08□□□□□ -0,64
Cpsf4-205ENSMUST00000160629 4933415A04RikQ9D443 101 aa11,06□□□□□ -0,64
Cpsf4-205ENSMUST00000160629 Gm19426M0QWC7 77 aa11,02□□□□□ -0,65
Cpsf4-205ENSMUST00000160629 Gm10337F7DEP7 55 aa11,01□□□□□ -0,65
Cpsf4-205ENSMUST00000160629 SspoQ8CG65 4998 aa10,98□□□□□ -0,65
Cpsf4-205ENSMUST00000160629 H2al1kJ3QP08 105 aa10,95□□□□□ -0,66
Cpsf4-205ENSMUST00000160629 H2al1mQ9DAD9 105 aa10,95□□□□□ -0,66
Cpsf4-205ENSMUST00000160629 Gm11569B1AQB1 180 aa10,95□□□□□ -0,66
Cpsf4-205ENSMUST00000160629 Gm11562A0PK51 136 aa10,93□□□□□ -0,66
Cpsf4-205ENSMUST00000160629 Krtap17-1A2A5X6 109 aa10,75□□□□□ -0,69
Cpsf4-205ENSMUST00000160629 CriptO70333 101 aa10,75□□□□□ -0,69
Cpsf4-205ENSMUST00000160629 Krtap4-2B1AQ85 167 aa10,72□□□□□ -0,69
Cpsf4-205ENSMUST00000160629 Gm17402F6Z0L5 76 aa10,67□□□□□ -0,7
Cpsf4-205ENSMUST00000160629 Spink7Q6IE32 76 aa10,67□□□□□ -0,7
Cpsf4-205ENSMUST00000160629 Ndufs5Q99LY9 106 aa10,66□□□□□ -0,7
Cpsf4-205ENSMUST00000160629 Gm3646F6S692 53 aa10,6□□□□□ -0,71
Cpsf4-205ENSMUST00000160629 Lce1gQ9D195 139 aa10,57□□□□□ -0,72
Cpsf4-205ENSMUST00000160629 Krtap12-1Q9Z287 130 aa10,52□□□□□ -0,73
Cpsf4-205ENSMUST00000160629 B930094E09RikQ8C4T2 136 aa10,48□□□□□ -0,73
Cpsf4-205ENSMUST00000160629 Gm3880A0A1B0GSB3 72 aa10,44□□□□□ -0,74
Cpsf4-205ENSMUST00000160629 Lce1jD3YUU5 139 aa10,44□□□□□ -0,74
Cpsf4-205ENSMUST00000160629 Sprr2a3Q4KL71 83 aa10,43□□□□□ -0,74
Cpsf4-205ENSMUST00000160629 Sprr2a1Q9CQK8 83 aa10,43□□□□□ -0,74
Cpsf4-205ENSMUST00000160629 Krtap19-9aF8WH65 55 aa10,4□□□□□ -0,74
Cpsf4-205ENSMUST00000160629 Pla2g10Q9QXX3 151 aa10,33□□□□□ -0,76
Cpsf4-205ENSMUST00000160629 Syne2Q6ZWQ0 6874 aaKnown RBP10,32□□□□□ -0,76
Cpsf4-205ENSMUST00000160629 Gm11555B1AQ89 175 aa10,28□□□□□ -0,76
Cpsf4-205ENSMUST00000160629 Krtap19-2Q925I0 141 aa10,25□□□□□ -0,77
Cpsf4-205ENSMUST00000160629 Krtap9-5A2A5X3 358 aa10,23□□□□□ -0,77
Cpsf4-205ENSMUST00000160629 Muc5bE9Q5I3 4800 aa10,21□□□□□ -0,78
Cpsf4-205ENSMUST00000160629 Gm11596B1AQB0 205 aa10,17□□□□□ -0,78
Cpsf4-205ENSMUST00000160629 Prm2P07978 107 aa10,17□□□□□ -0,78
Cpsf4-205ENSMUST00000160629 Gm12216A0A1W2P827 62 aa10,14□□□□□ -0,79
Cpsf4-205ENSMUST00000160629 Krtap4-6Q3V4B7 195 aa10,07□□□□□ -0,8
Cpsf4-205ENSMUST00000160629 Mdn1A2ANY6 5589 aaKnown RBP10,05□□□□□ -0,8
Cpsf4-205ENSMUST00000160629 Romo1P60603 79 aa10□□□□□ -0,81
Cpsf4-205ENSMUST00000160629 Gm19668J3QMD1 248 aa9,94□□□□□ -0,82
Cpsf4-205ENSMUST00000160629 Gm21887J3QQ04 176 aa9,9□□□□□ -0,83
Cpsf4-205ENSMUST00000160629 Krtap4-1Q3UUY3 169 aa9,89□□□□□ -0,83
Cpsf4-205ENSMUST00000160629 Camk2n1Q6QWF9 78 aa9,81□□□□□ -0,84
Cpsf4-205ENSMUST00000160629 Lce1iQ9D6P5 149 aa9,8□□□□□ -0,84
Cpsf4-205ENSMUST00000160629 Gm6358A0A087WPH4 74 aa9,79□□□□□ -0,84
Cpsf4-205ENSMUST00000160629 Gm11564A2A4L9 201 aa9,66□□□□□ -0,86
Cpsf4-205ENSMUST00000160629 Gm11563B1AQ90 168 aa9,66□□□□□ -0,86
Cpsf4-205ENSMUST00000160629 Gm11595B1AQA7 289 aa9,66□□□□□ -0,86
Cpsf4-205ENSMUST00000160629 Krtap4-8B1AQA8 209 aa9,66□□□□□ -0,86
Cpsf4-205ENSMUST00000160629 Lce1a2Q9D1K4 149 aa9,66□□□□□ -0,86
Cpsf4-205ENSMUST00000160629 Mt2P02798 61 aa9,45□□□□□ -0,9
Cpsf4-205ENSMUST00000160629 Krtap8-1O08633 61 aa9,42□□□□□ -0,9
Cpsf4-205ENSMUST00000160629 Krtap4-9B1AQA9 244 aa9,37□□□□□ -0,91
Cpsf4-205ENSMUST00000160629 Krtap19-9bQ99NG9 58 aa9,37□□□□□ -0,91
Cpsf4-205ENSMUST00000160629 Mt4P47945 62 aa9,24□□□□□ -0,93
Cpsf4-205ENSMUST00000160629 Fsip2A2ARZ3 6995 aa9,23□□□□□ -0,93
Cpsf4-205ENSMUST00000160629 Krtap9-3Q3V2C1 136 aa9,14□□□□□ -0,95
Cpsf4-205ENSMUST00000160629 Gm40193A0A1B0GT39 78 aa9,11□□□□□ -0,95
Cpsf4-205ENSMUST00000160629 Krtap4-13Q9D7P3 165 aa9,02□□□□□ -0,96
Cpsf4-205ENSMUST00000160629 Krtap7-1Q9D3I6 87 aa9,02□□□□□ -0,97
Cpsf4-205ENSMUST00000160629 Krtap22-2J3QNX6 67 aa9□□□□□ -0,97
Cpsf4-205ENSMUST00000160629 Krtap6-3A0A087WQL6 57 aa8,93□□□□□ -0,98
Cpsf4-205ENSMUST00000160629 Lce1bQ9D149 137 aa8,91□□□□□ -0,98
Cpsf4-205ENSMUST00000160629 Tnp1P10856 55 aa8,86□□□□□ -0,99
Cpsf4-205ENSMUST00000160629 Sprr2kO70562 68 aa8,84□□□□□ -0,99
Cpsf4-205ENSMUST00000160629 Mp68P56379 58 aa8,76□□□□□ -1,01
Cpsf4-205ENSMUST00000160629 Gm38119A0A0A6YX29 146 aa8,74□□□□□ -1,01
Cpsf4-205ENSMUST00000160629 2300003K06RikA2A4M0 262 aa8,71□□□□□ -1,02
Cpsf4-205ENSMUST00000160629 Lce1lQ9D1G7 135 aa8,64□□□□□ -1,03
Cpsf4-205ENSMUST00000160629 Lce1hQ9D6R3 140 aa8,59□□□□□ -1,03
Cpsf4-205ENSMUST00000160629 Krtap4-7Q9D732 168 aa8,58□□□□□ -1,04
Cpsf4-205ENSMUST00000160629 2310046K23RikA0A0A6YVW6 87 aa8,36□□□□□ -1,07
Cpsf4-205ENSMUST00000160629 Sprr2gO70558 76 aa8,28□□□□□ -1,08
Cpsf4-205ENSMUST00000160629 Lce1a1Q9CQH5 143 aa8,2□□□□□ -1,1
Cpsf4-205ENSMUST00000160629 Krtap20-2E9Q0A8 60 aa8,16□□□□□ -1,1
Cpsf4-205ENSMUST00000160629 Gm10272F7CZ33 110 aa8,13□□□□□ -1,11
Cpsf4-205ENSMUST00000160629 Lce1dQ9D731 133 aa7,98□□□□□ -1,13
Retrieved 100 of 22,080 RNA–protein pairs in 63,5 ms