RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Gm11569B1AQB1 180 aa6.32□□□□□ -1.4
Trim50-202ENSMUST00000111180 1700042G07RikB1AUF7 90 aa6.32□□□□□ -1.4
Trim50-202ENSMUST00000111180 Krtap19-3Q925H6 87 aa6.29□□□□□ -1.4
Trim50-202ENSMUST00000111180 Gm20661K7N787 53 aa6.28□□□□□ -1.4
Trim50-202ENSMUST00000111180 Krtap16-3Q8C1I6 86 aa6.28□□□□□ -1.4
Trim50-202ENSMUST00000111180 Gm10197F6QEY5 67 aa6.27□□□□□ -1.41
Trim50-202ENSMUST00000111180 Defb1P56386 69 aa6.26□□□□□ -1.41
Trim50-202ENSMUST00000111180 H2al1aQ5M8Q2 105 aa6.26□□□□□ -1.41
Trim50-202ENSMUST00000111180 H2al1eQ810S6 105 aa6.26□□□□□ -1.41
Trim50-202ENSMUST00000111180 Krtap19-1Q925H2 87 aa6.26□□□□□ -1.41
Trim50-202ENSMUST00000111180 Phxr4P15974 95 aa6.25□□□□□ -1.41
Trim50-202ENSMUST00000111180 Fam229aB2KGE5 128 aa6.23□□□□□ -1.41
Trim50-202ENSMUST00000111180 2210017I01RikA0A0A6YVV1 95 aa6.21□□□□□ -1.42
Trim50-202ENSMUST00000111180 Cox6b2Q80ZN9 88 aa6.21□□□□□ -1.42
Trim50-202ENSMUST00000111180 Pcp4P63054 62 aa6.2□□□□□ -1.42
Trim50-202ENSMUST00000111180 Lce1gQ9D195 139 aa6.19□□□□□ -1.42
Trim50-202ENSMUST00000111180 Krtap1-4Q3V2D6 188 aa6.17□□□□□ -1.42
Trim50-202ENSMUST00000111180 Uqcr11Q9CPX8 56 aa6.17□□□□□ -1.42
Trim50-202ENSMUST00000111180 SspoQ8CG65 4998 aa6.16□□□□□ -1.42
Trim50-202ENSMUST00000111180 H2al1bA0A087WP11 105 aa6.15□□□□□ -1.42
Trim50-202ENSMUST00000111180 Ndufb1P0DN34 57 aa6.14□□□□□ -1.43
Trim50-202ENSMUST00000111180 Limd2Q8BGB5 128 aa6.14□□□□□ -1.43
Trim50-202ENSMUST00000111180 Gm17606F6ZL36 78 aa6.13□□□□□ -1.43
Trim50-202ENSMUST00000111180 Krtap13-1Q8K198 168 aa6.11□□□□□ -1.43
Trim50-202ENSMUST00000111180 Syne2Q6ZWQ0 6874 aaKnown RBP6.09□□□□□ -1.44
Trim50-202ENSMUST00000111180 Krtap1-5A2A590 122 aa6.05□□□□□ -1.44
Trim50-202ENSMUST00000111180 Krtap3-1A2A591 98 aa6.05□□□□□ -1.44
Trim50-202ENSMUST00000111180 Sec61gP60060 68 aa6.01□□□□□ -1.45
Trim50-202ENSMUST00000111180 Gm10382Q3V0T5 144 aa5.96□□□□□ -1.45
Trim50-202ENSMUST00000111180 Gm11596B1AQB0 205 aa5.95□□□□□ -1.46
Trim50-202ENSMUST00000111180 Gm11555B1AQ89 175 aa5.94□□□□□ -1.46
Trim50-202ENSMUST00000111180 Gm20537G3UYK7 97 aa5.91□□□□□ -1.46
Trim50-202ENSMUST00000111180 Sox16Q62247 57 aa5.91□□□□□ -1.46
Trim50-202ENSMUST00000111180 BC029722A0A0N4SW31 51 aa5.9□□□□□ -1.47
Trim50-202ENSMUST00000111180 B930094E09RikQ8C4T2 136 aa5.9□□□□□ -1.47
Trim50-202ENSMUST00000111180 Gm9955Q8CEJ8 102 aa5.85□□□□□ -1.47
Trim50-202ENSMUST00000111180 Gm19426M0QWC7 77 aa5.84□□□□□ -1.47
Trim50-202ENSMUST00000111180 Krtap4-6Q3V4B7 195 aa5.84□□□□□ -1.47
Trim50-202ENSMUST00000111180 Muc5bE9Q5I3 4800 aa5.84□□□□□ -1.47
Trim50-202ENSMUST00000111180 Mdn1A2ANY6 5589 aaKnown RBP5.79□□□□□ -1.48
Trim50-202ENSMUST00000111180 4933415A04RikQ9D443 101 aa5.77□□□□□ -1.49
Trim50-202ENSMUST00000111180 Gm10337F7DEP7 55 aa5.77□□□□□ -1.49
Trim50-202ENSMUST00000111180 Lce1jD3YUU5 139 aa5.76□□□□□ -1.49
Trim50-202ENSMUST00000111180 Krtap4-1Q3UUY3 169 aa5.74□□□□□ -1.49
Trim50-202ENSMUST00000111180 Krtap9-5A2A5X3 358 aa5.72□□□□□ -1.49
Trim50-202ENSMUST00000111180 H2al1kJ3QP08 105 aa5.72□□□□□ -1.49
Trim50-202ENSMUST00000111180 H2al1mQ9DAD9 105 aa5.72□□□□□ -1.49
Trim50-202ENSMUST00000111180 CriptO70333 101 aa5.7□□□□□ -1.5
Trim50-202ENSMUST00000111180 Krtap19-2Q925I0 141 aa5.68□□□□□ -1.5
Trim50-202ENSMUST00000111180 Spink7Q6IE32 76 aa5.64□□□□□ -1.51
Trim50-202ENSMUST00000111180 Gm11564A2A4L9 201 aa5.62□□□□□ -1.51
Trim50-202ENSMUST00000111180 Gm11563B1AQ90 168 aa5.62□□□□□ -1.51
Trim50-202ENSMUST00000111180 Gm11595B1AQA7 289 aa5.62□□□□□ -1.51
Trim50-202ENSMUST00000111180 Krtap4-8B1AQA8 209 aa5.62□□□□□ -1.51
Trim50-202ENSMUST00000111180 Gm17402F6Z0L5 76 aa5.62□□□□□ -1.51
Trim50-202ENSMUST00000111180 Pla2g10Q9QXX3 151 aa5.61□□□□□ -1.51
Trim50-202ENSMUST00000111180 Ndufs5Q99LY9 106 aa5.58□□□□□ -1.52
Trim50-202ENSMUST00000111180 Krtap12-1Q9Z287 130 aa5.56□□□□□ -1.52
Trim50-202ENSMUST00000111180 Gm3646F6S692 53 aa5.55□□□□□ -1.52
Trim50-202ENSMUST00000111180 Krtap19-9aF8WH65 55 aa5.51□□□□□ -1.53
Trim50-202ENSMUST00000111180 Sprr2a3Q4KL71 83 aa5.51□□□□□ -1.53
Trim50-202ENSMUST00000111180 Sprr2a1Q9CQK8 83 aa5.51□□□□□ -1.53
Trim50-202ENSMUST00000111180 Gm3880A0A1B0GSB3 72 aa5.48□□□□□ -1.53
Trim50-202ENSMUST00000111180 Gm6358A0A087WPH4 74 aa5.46□□□□□ -1.53
Trim50-202ENSMUST00000111180 SvipQ3UZP4 77 aa5.45□□□□□ -1.54
Trim50-202ENSMUST00000111180 Krtap4-9B1AQA9 244 aa5.45□□□□□ -1.54
Trim50-202ENSMUST00000111180 Prm2P07978 107 aa5.43□□□□□ -1.54
Trim50-202ENSMUST00000111180 Fsip2A2ARZ3 6995 aa5.39□□□□□ -1.55
Trim50-202ENSMUST00000111180 Mt4P47945 62 aa5.37□□□□□ -1.55
Trim50-202ENSMUST00000111180 Gm12216A0A1W2P827 62 aa5.32□□□□□ -1.56
Trim50-202ENSMUST00000111180 Romo1P60603 79 aa5.26□□□□□ -1.57
Trim50-202ENSMUST00000111180 Krtap4-13Q9D7P3 165 aa5.25□□□□□ -1.57
Trim50-202ENSMUST00000111180 Gm19668J3QMD1 248 aa5.23□□□□□ -1.57
Trim50-202ENSMUST00000111180 Gm21887J3QQ04 176 aa5.23□□□□□ -1.57
Trim50-202ENSMUST00000111180 Krtap6-3A0A087WQL6 57 aa5.22□□□□□ -1.57
Trim50-202ENSMUST00000111180 Lce1iQ9D6P5 149 aa5.21□□□□□ -1.58
Trim50-202ENSMUST00000111180 Krtap9-3Q3V2C1 136 aa5.2□□□□□ -1.58
Trim50-202ENSMUST00000111180 Sprr2kO70562 68 aa5.19□□□□□ -1.58
Trim50-202ENSMUST00000111180 Camk2n1Q6QWF9 78 aa5.18□□□□□ -1.58
Trim50-202ENSMUST00000111180 Krtap8-1O08633 61 aa5.15□□□□□ -1.58
Trim50-202ENSMUST00000111180 Mt2P02798 61 aa5.15□□□□□ -1.58
Trim50-202ENSMUST00000111180 Lce1a2Q9D1K4 149 aa5.11□□□□□ -1.59
Trim50-202ENSMUST00000111180 Lce1lQ9D1G7 135 aa5.08□□□□□ -1.6
Trim50-202ENSMUST00000111180 Lce1bQ9D149 137 aa5.07□□□□□ -1.6
Trim50-202ENSMUST00000111180 Gm38119A0A0A6YX29 146 aa5.05□□□□□ -1.6
Trim50-202ENSMUST00000111180 2300003K06RikA2A4M0 262 aa5.04□□□□□ -1.6
Trim50-202ENSMUST00000111180 Krtap4-7Q9D732 168 aa4.97□□□□□ -1.61
Trim50-202ENSMUST00000111180 Krtap19-9bQ99NG9 58 aa4.94□□□□□ -1.62
Trim50-202ENSMUST00000111180 Krtap22-2J3QNX6 67 aa4.92□□□□□ -1.62
Trim50-202ENSMUST00000111180 Sprr2gO70558 76 aa4.85□□□□□ -1.63
Trim50-202ENSMUST00000111180 Lce1a1Q9CQH5 143 aa4.81□□□□□ -1.64
Trim50-202ENSMUST00000111180 Gm40193A0A1B0GT39 78 aa4.78□□□□□ -1.64
Trim50-202ENSMUST00000111180 Krtap20-2E9Q0A8 60 aa4.76□□□□□ -1.65
Trim50-202ENSMUST00000111180 Lce1hQ9D6R3 140 aa4.74□□□□□ -1.65
Trim50-202ENSMUST00000111180 Krtap7-1Q9D3I6 87 aa4.71□□□□□ -1.66
Trim50-202ENSMUST00000111180 Lce1eQ9D139 143 aa4.7□□□□□ -1.66
Trim50-202ENSMUST00000111180 2310046K23RikA0A0A6YVW6 87 aa4.69□□□□□ -1.66
Trim50-202ENSMUST00000111180 Tnp1P10856 55 aa4.67□□□□□ -1.66
Trim50-202ENSMUST00000111180 Mp68P56379 58 aa4.59□□□□□ -1.67
Trim50-202ENSMUST00000111180 Lce1dQ9D731 133 aa4.54□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 111.2 ms