RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Gm10061D3Z714 54 aa14,89□□□□□ -0,03
Ctdnep1-201ENSMUST00000108593 Smim20D3Z7Q2 69 aa14,7□□□□□ -0,06
Ctdnep1-201ENSMUST00000108593 Defb1P56386 69 aa14,68□□□□□ -0,06
Ctdnep1-201ENSMUST00000108593 Cdc42se1Q8BHL7 80 aa14,67□□□□□ -0,06
Ctdnep1-201ENSMUST00000108593 SspoQ8CG65 4998 aa14,66□□□□□ -0,06
Ctdnep1-201ENSMUST00000108593 Serp1Q9Z1W5 66 aa14,66□□□□□ -0,06
Ctdnep1-201ENSMUST00000108593 Krtap3-1A2A591 98 aa14,63□□□□□ -0,07
Ctdnep1-201ENSMUST00000108593 Rps28P62858 69 aaKnown RBP14,57□□□□□ -0,08
Ctdnep1-201ENSMUST00000108593 Brk1Q91VR8 75 aa14,56□□□□□ -0,08
Ctdnep1-201ENSMUST00000108593 Cox6b2Q80ZN9 88 aa14,55□□□□□ -0,08
Ctdnep1-201ENSMUST00000108593 Pcp4P63054 62 aa14,51□□□□□ -0,09
Ctdnep1-201ENSMUST00000108593 SptssbQ925E8 76 aa14,51□□□□□ -0,09
Ctdnep1-201ENSMUST00000108593 Gm11569B1AQB1 180 aa14,41□□□□□ -0,1
Ctdnep1-201ENSMUST00000108593 Gm10197F6QEY5 67 aa14,41□□□□□ -0,1
Ctdnep1-201ENSMUST00000108593 Gm17606F6ZL36 78 aa14,4□□□□□ -0,1
Ctdnep1-201ENSMUST00000108593 Gm11563B1AQ90 168 aa14,37□□□□□ -0,11
Ctdnep1-201ENSMUST00000108593 Krtap4-7Q9D732 168 aa14,37□□□□□ -0,11
Ctdnep1-201ENSMUST00000108593 Gm20661K7N787 53 aa14,35□□□□□ -0,11
Ctdnep1-201ENSMUST00000108593 Gm19426M0QWC7 77 aa14,3□□□□□ -0,12
Ctdnep1-201ENSMUST00000108593 Phxr4P15974 95 aa14,3□□□□□ -0,12
Ctdnep1-201ENSMUST00000108593 H2al1aQ5M8Q2 105 aa14,26□□□□□ -0,13
Ctdnep1-201ENSMUST00000108593 H2al1eQ810S6 105 aa14,26□□□□□ -0,13
Ctdnep1-201ENSMUST00000108593 BC029722A0A0N4SW31 51 aa14,15□□□□□ -0,14
Ctdnep1-201ENSMUST00000108593 Gm20537G3UYK7 97 aa14,13□□□□□ -0,15
Ctdnep1-201ENSMUST00000108593 Gm11555B1AQ89 175 aa14,1□□□□□ -0,15
Ctdnep1-201ENSMUST00000108593 Gm10382Q3V0T5 144 aa14,09□□□□□ -0,15
Ctdnep1-201ENSMUST00000108593 H2al1bA0A087WP11 105 aa14,04□□□□□ -0,16
Ctdnep1-201ENSMUST00000108593 Uqcr11Q9CPX8 56 aa14,01□□□□□ -0,17
Ctdnep1-201ENSMUST00000108593 Krtap12-1Q9Z287 130 aa14□□□□□ -0,17
Ctdnep1-201ENSMUST00000108593 Lce1jD3YUU5 139 aa13,98□□□□□ -0,17
Ctdnep1-201ENSMUST00000108593 Gm11562A0PK51 136 aa13,96□□□□□ -0,17
Ctdnep1-201ENSMUST00000108593 Krtap19-2Q925I0 141 aa13,94□□□□□ -0,18
Ctdnep1-201ENSMUST00000108593 Ndufb1P0DN34 57 aa13,92□□□□□ -0,18
Ctdnep1-201ENSMUST00000108593 Limd2Q8BGB5 128 aa13,92□□□□□ -0,18
Ctdnep1-201ENSMUST00000108593 B930094E09RikQ8C4T2 136 aa13,92□□□□□ -0,18
Ctdnep1-201ENSMUST00000108593 Krtap9-5A2A5X3 358 aa13,9□□□□□ -0,18
Ctdnep1-201ENSMUST00000108593 Krtap4-2B1AQ85 167 aa13,82□□□□□ -0,2
Ctdnep1-201ENSMUST00000108593 CriptO70333 101 aa13,8□□□□□ -0,2
Ctdnep1-201ENSMUST00000108593 Krtap17-1A2A5X6 109 aa13,75□□□□□ -0,21
Ctdnep1-201ENSMUST00000108593 Krtap19-9aF8WH65 55 aa13,72□□□□□ -0,21
Ctdnep1-201ENSMUST00000108593 Lce1gQ9D195 139 aa13,71□□□□□ -0,22
Ctdnep1-201ENSMUST00000108593 Spink7Q6IE32 76 aa13,65□□□□□ -0,22
Ctdnep1-201ENSMUST00000108593 Pla2g10Q9QXX3 151 aa13,64□□□□□ -0,23
Ctdnep1-201ENSMUST00000108593 Sec61gP60060 68 aa13,61□□□□□ -0,23
Ctdnep1-201ENSMUST00000108593 Muc5bE9Q5I3 4800 aa13,58□□□□□ -0,24
Ctdnep1-201ENSMUST00000108593 Prm2P07978 107 aa13,57□□□□□ -0,24
Ctdnep1-201ENSMUST00000108593 Sox16Q62247 57 aa13,46□□□□□ -0,25
Ctdnep1-201ENSMUST00000108593 Gm9955Q8CEJ8 102 aa13,37□□□□□ -0,27
Ctdnep1-201ENSMUST00000108593 4933415A04RikQ9D443 101 aa13,35□□□□□ -0,27
Ctdnep1-201ENSMUST00000108593 Gm10337F7DEP7 55 aa13,3□□□□□ -0,28
Ctdnep1-201ENSMUST00000108593 Gm6358A0A087WPH4 74 aa13,29□□□□□ -0,28
Ctdnep1-201ENSMUST00000108593 Syne2Q6ZWQ0 6874 aaKnown RBP13,29□□□□□ -0,28
Ctdnep1-201ENSMUST00000108593 H2al1kJ3QP08 105 aa13,23□□□□□ -0,29
Ctdnep1-201ENSMUST00000108593 H2al1mQ9DAD9 105 aa13,23□□□□□ -0,29
Ctdnep1-201ENSMUST00000108593 Gm11596B1AQB0 205 aa13,21□□□□□ -0,29
Ctdnep1-201ENSMUST00000108593 Krtap4-6Q3V4B7 195 aa13,2□□□□□ -0,3
Ctdnep1-201ENSMUST00000108593 Gm17402F6Z0L5 76 aa13,18□□□□□ -0,3
Ctdnep1-201ENSMUST00000108593 Sprr2a3Q4KL71 83 aa13,15□□□□□ -0,3
Ctdnep1-201ENSMUST00000108593 Sprr2a1Q9CQK8 83 aa13,15□□□□□ -0,3
Ctdnep1-201ENSMUST00000108593 Lce1iQ9D6P5 149 aa13,11□□□□□ -0,31
Ctdnep1-201ENSMUST00000108593 Mdn1A2ANY6 5589 aaKnown RBP13,07□□□□□ -0,32
Ctdnep1-201ENSMUST00000108593 Lce1a2Q9D1K4 149 aa12,9□□□□□ -0,34
Ctdnep1-201ENSMUST00000108593 Gm3646F6S692 53 aa12,84□□□□□ -0,35
Ctdnep1-201ENSMUST00000108593 SvipQ3UZP4 77 aa12,8□□□□□ -0,36
Ctdnep1-201ENSMUST00000108593 Ndufs5Q99LY9 106 aa12,77□□□□□ -0,36
Ctdnep1-201ENSMUST00000108593 Mt2P02798 61 aa12,73□□□□□ -0,37
Ctdnep1-201ENSMUST00000108593 Gm11564A2A4L9 201 aa12,64□□□□□ -0,39
Ctdnep1-201ENSMUST00000108593 Gm11595B1AQA7 289 aa12,64□□□□□ -0,39
Ctdnep1-201ENSMUST00000108593 Krtap4-8B1AQA8 209 aa12,64□□□□□ -0,39
Ctdnep1-201ENSMUST00000108593 Gm19668J3QMD1 248 aa12,62□□□□□ -0,39
Ctdnep1-201ENSMUST00000108593 Gm3880A0A1B0GSB3 72 aa12,57□□□□□ -0,4
Ctdnep1-201ENSMUST00000108593 Krtap8-1O08633 61 aa12,42□□□□□ -0,42
Ctdnep1-201ENSMUST00000108593 Krtap4-9B1AQA9 244 aa12,27□□□□□ -0,44
Ctdnep1-201ENSMUST00000108593 Gm21887J3QQ04 176 aa12,25□□□□□ -0,45
Ctdnep1-201ENSMUST00000108593 Krtap9-3Q3V2C1 136 aa12,22□□□□□ -0,45
Ctdnep1-201ENSMUST00000108593 Camk2n1Q6QWF9 78 aa12,15□□□□□ -0,46
Ctdnep1-201ENSMUST00000108593 Mt4P47945 62 aa12,15□□□□□ -0,47
Ctdnep1-201ENSMUST00000108593 Krtap22-2J3QNX6 67 aa12,12□□□□□ -0,47
Ctdnep1-201ENSMUST00000108593 Gm12216A0A1W2P827 62 aa12,08□□□□□ -0,48
Ctdnep1-201ENSMUST00000108593 Krtap19-9bQ99NG9 58 aa12,02□□□□□ -0,49
Ctdnep1-201ENSMUST00000108593 Fsip2A2ARZ3 6995 aa11,98□□□□□ -0,49
Ctdnep1-201ENSMUST00000108593 Romo1P60603 79 aa11,97□□□□□ -0,49
Ctdnep1-201ENSMUST00000108593 Lce1bQ9D149 137 aa11,88□□□□□ -0,51
Ctdnep1-201ENSMUST00000108593 Krtap4-13Q9D7P3 165 aa11,8□□□□□ -0,52
Ctdnep1-201ENSMUST00000108593 Krtap6-3A0A087WQL6 57 aa11,6□□□□□ -0,55
Ctdnep1-201ENSMUST00000108593 Sprr2kO70562 68 aa11,6□□□□□ -0,55
Ctdnep1-201ENSMUST00000108593 Gm38119A0A0A6YX29 146 aa11,56□□□□□ -0,56
Ctdnep1-201ENSMUST00000108593 2300003K06RikA2A4M0 262 aa11,48□□□□□ -0,57
Ctdnep1-201ENSMUST00000108593 Lce1lQ9D1G7 135 aa11,24□□□□□ -0,61
Ctdnep1-201ENSMUST00000108593 Lce1hQ9D6R3 140 aa11,06□□□□□ -0,64
Ctdnep1-201ENSMUST00000108593 Krtap7-1Q9D3I6 87 aa11,04□□□□□ -0,64
Ctdnep1-201ENSMUST00000108593 Sprr2gO70558 76 aa10,84□□□□□ -0,67
Ctdnep1-201ENSMUST00000108593 Gm40193A0A1B0GT39 78 aa10,82□□□□□ -0,68
Ctdnep1-201ENSMUST00000108593 Lce1dQ9D731 133 aa10,7□□□□□ -0,7
Ctdnep1-201ENSMUST00000108593 Tnp1P10856 55 aa10,66□□□□□ -0,7
Ctdnep1-201ENSMUST00000108593 Lce1a1Q9CQH5 143 aa10,64□□□□□ -0,71
Ctdnep1-201ENSMUST00000108593 A0A1Y7VJH8 109 aa10,63□□□□□ -0,71
Ctdnep1-201ENSMUST00000108593 Krtap20-2E9Q0A8 60 aa10,61□□□□□ -0,71
Ctdnep1-201ENSMUST00000108593 Gm10272F7CZ33 110 aa10,6□□□□□ -0,71
Ctdnep1-201ENSMUST00000108593 Krtap31-2Q8CAY5 177 aa10,48□□□□□ -0,73
Retrieved 100 of 22,080 RNA–protein pairs in 38,4 ms