RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Gm7735D3YX18 52 aa3.56□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Defa28D3Z1V9 94 aa3.56□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Gm10770F7D043 238 aa3.56□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Gm10139O88245 57 aa3.56□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Gm10767Q3TQP0 103 aa3.56□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Defa25Q5G864 92 aa3.56□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 IqcjQ8BPW0 110 aa3.56□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Igkv8-26A0A075B5N5 123 aa3.55□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Gm4553A0A1B0GSA9 284 aa3.55□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Defb45Q3V490 66 aa3.55□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 GhrhP16043 103 aa3.54□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Elof1P60003 83 aa3.54□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Krtap4-6Q3V4B7 195 aa3.54□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Gm9789Q8BIG3 52 aa3.54□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Wfdc13Q5DQQ6 81 aa3.53□□□□□ -1.84
Ccdc54-201ENSMUST00000062439 Igkv1-122A0A140T8M9 119 aa3.52□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Ccl25O35903 144 aa3.52□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Gm5868Q8BJG1 145 aa3.52□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Dnal4Q9DCM4 105 aa3.52□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Igkv3-10A0A0G2JGN0 119 aa3.51□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 SelenowP63300 88 aa3.51□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Hint1P70349 126 aaKnown RBP3.51□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Gm4559A4IF42 199 aa3.49□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Defb29Q8BGW9 78 aa3.49□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Ush2AQ2QI47 5193 aa3.48□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 7530416G11RikJ3QJX6 159 aa3.48□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Defb37Q7TMD2 62 aa3.48□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Krtap16-3Q8C1I6 86 aa3.48□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 4933428G20RikQ9D3X4 101 aa3.48□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Rps29P62274 56 aa3.47□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Spaca4Q80ZQ0 127 aa3.47□□□□□ -1.85
Ccdc54-201ENSMUST00000062439 Igkv8-27A0A0G2JF28 120 aa3.46□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Gm11562A0PK51 136 aa3.46□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Xcl1P47993 114 aa3.45□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Rpl39lQ9CQD0 51 aa3.45□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Gm16381A0A1Y7VKT9 73 aa3.44□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Gm10401E9Q3K6 71 aa3.44□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Defa21Q8C1P2 93 aa3.44□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Tac4Q99N14 128 aa3.44□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Krtap5-1Q64507 230 aa3.43□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Prr15lQ8JZM2 100 aa3.43□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Gm7579A0A1B0GRJ4 243 aa3.42□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 4930518I15RikQ3V2W7 57 aa3.42□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 A830005F24RikQ8BRT5 167 aa3.42□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 4930524J08RikQ9CUJ5 163 aa3.42□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Krtap5-2Q9D5Z7 189 aa3.42□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 4932415D10RikA0A1W2P6U8 4986 aa3.41□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Gm5767A0A0J9YTU8 78 aa3.41□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Igkv3-4A0A140T8Q4 119 aa3.41□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Gm21886J3QJU9 214 aa3.41□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 G0s2Q61585 103 aa3.41□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Q8BT88 171 aa3.41□□□□□ -1.86
Ccdc54-201ENSMUST00000062439 Hmcn2A2AJ76 5100 aa3.4□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Igkv2-109A0A075B5K6 120 aa3.4□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Smim13E9Q942 88 aa3.4□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 P06320 134 aa3.4□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Lce3fQ6PAI4 98 aa3.4□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Lce3cQ91V05 98 aa3.4□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Gm29423A0A087WRM1 55 aa3.39□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Gm16253D3Z167 63 aa3.39□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Defb47Q30KN1 79 aa3.39□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 1700018G05RikA0A1B0GSI2 66 aa3.38□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Gm40193A0A1B0GT39 78 aa3.38□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Ubr4A2AN08 5180 aa3.37□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Sfta2E9PXB6 77 aa3.37□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Cox6a2P43023 97 aa3.37□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Smr3aQ61900 147 aa3.37□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Sprr2jO70561 109 aa3.35□□□□□ -1.87
Ccdc54-201ENSMUST00000062439 Cox7cP17665 63 aa3.33□□□□□ -1.88
Ccdc54-201ENSMUST00000062439 Acyp1P56376 99 aa3.32□□□□□ -1.88
Ccdc54-201ENSMUST00000062439 Mtatp8P03930 67 aa3.31□□□□□ -1.88
Ccdc54-201ENSMUST00000062439 B230307C23RikQ8BLB2 64 aa3.3□□□□□ -1.88
Ccdc54-201ENSMUST00000062439 Spink13Q3UTS8 97 aa3.29□□□□□ -1.88
Ccdc54-201ENSMUST00000062439 Gm10229O08631 77 aa3.28□□□□□ -1.88
Ccdc54-201ENSMUST00000062439 Rbm3O89086 153 aaKnown RBP3.27□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 NrepQ07475 68 aa3.27□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 Rpl37Q9D823 97 aa3.26□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 C130032M10RikQ8C888 123 aa3.25□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 Pde6gP09174 87 aa3.24□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 UqcrqQ9CQ69 82 aa3.24□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 Gm37013Q8K491 104 aa3.23□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 Mrpl34Q99N91 92 aa3.23□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 Serp2Q6TAW2 65 aa3.22□□□□□ -1.89
Ccdc54-201ENSMUST00000062439 Ormdl1Q921I0 153 aa3.21□□□□□ -1.9
Ccdc54-201ENSMUST00000062439 Cdc42se1Q8BHL7 80 aa3.2□□□□□ -1.9
Ccdc54-201ENSMUST00000062439 ZanO88799 5376 aa3.2□□□□□ -1.9
Ccdc54-201ENSMUST00000062439 Igkv8-19A0A0G2JFN8 121 aa3.18□□□□□ -1.9
Ccdc54-201ENSMUST00000062439 BikO70337 150 aa3.17□□□□□ -1.9
Ccdc54-201ENSMUST00000062439 Krtap19-1Q925H2 87 aa3.17□□□□□ -1.9
Ccdc54-201ENSMUST00000062439 Fat4Q2PZL6 4981 aa3.17□□□□□ -1.9
Ccdc54-201ENSMUST00000062439 Defb13Q8R2I4 64 aa3.15□□□□□ -1.91
Ccdc54-201ENSMUST00000062439 Gm10267M0QWD8 85 aa3.14□□□□□ -1.91
Ccdc54-201ENSMUST00000062439 Spink8Q09TK9 105 aa3.14□□□□□ -1.91
Ccdc54-201ENSMUST00000062439 Rnf213E9Q555 5152 aaKnown RBP3.14□□□□□ -1.91
Ccdc54-201ENSMUST00000062439 Gm10061D3Z714 54 aa3.13□□□□□ -1.91
Ccdc54-201ENSMUST00000062439 Ubl5Q9EPV8 73 aa3.1□□□□□ -1.91
Ccdc54-201ENSMUST00000062439 SnurfQ9WU12 71 aa3.1□□□□□ -1.91
Ccdc54-201ENSMUST00000062439 Gm17416Q30KP4 66 aa3.07□□□□□ -1.92
Ccdc54-201ENSMUST00000062439 Gm4491E0CX42 125 aa3.05□□□□□ -1.92
Ccdc54-201ENSMUST00000062439 A0A286YE49 62 aa3.03□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 152.8 ms