RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Fat3Q8BNA6 4555 aa3.95□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Gm9955Q8CEJ8 102 aa3.95□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Herc1E9PZP8 4859 aa3.94□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Birc6O88738 4882 aa3.93□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Kmt2cQ8BRH4 4903 aa3.93□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Pkd1O08852 4293 aa3.93□□□□□ -1.78
Bdnf-201ENSMUST00000053317 A930033H14RikG5E8X6 103 aa3.92□□□□□ -1.78
Bdnf-201ENSMUST00000053317 2310057N15RikQ9D6T8 200 aa3.92□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Ndufaf8A2AMZ4 74 aa3.92□□□□□ -1.78
Bdnf-201ENSMUST00000053317 Dnhd1D3Z2X2 4750 aa3.9□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Romo1P60603 79 aa3.9□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Dnah8Q91XQ0 4731 aa3.89□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Gm5767A0A0J9YTU8 78 aa3.89□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Gm10382Q3V0T5 144 aa3.88□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Gm16253D3Z167 63 aa3.87□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Rpl37Q9D823 97 aa3.86□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Krtap3-2Q9D638 99 aa3.84□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Krtap3-3Q9D7P0 99 aa3.84□□□□□ -1.79
Bdnf-201ENSMUST00000053317 Crct1Q6PAI5 102 aa3.83□□□□□ -1.8
Bdnf-201ENSMUST00000053317 Gm9112A2AI92 75 aa3.81□□□□□ -1.8
Bdnf-201ENSMUST00000053317 Gm10318A0A1W2P728 225 aa3.8□□□□□ -1.8
Bdnf-201ENSMUST00000053317 Prm2P07978 107 aa3.8□□□□□ -1.8
Bdnf-201ENSMUST00000053317 Sec61bQ9CQS8 96 aaKnown RBP3.79□□□□□ -1.8
Bdnf-201ENSMUST00000053317 Gm2310J3QNJ2 377 aa3.78□□□□□ -1.8
Bdnf-201ENSMUST00000053317 Spink7Q6IE32 76 aa3.78□□□□□ -1.8
Bdnf-201ENSMUST00000053317 Pkhd1E9PZ36 4059 aa3.77□□□□□ -1.81
Bdnf-201ENSMUST00000053317 Gm11939A2A592 99 aa3.76□□□□□ -1.81
Bdnf-201ENSMUST00000053317 Fam229aB2KGE5 128 aa3.76□□□□□ -1.81
Bdnf-201ENSMUST00000053317 Ubr4A2AN08 5180 aa3.76□□□□□ -1.81
Bdnf-201ENSMUST00000053317 Hectd4E9Q2E4 4418 aa3.76□□□□□ -1.81
Bdnf-201ENSMUST00000053317 Rps29P62274 56 aa3.73□□□□□ -1.81
Bdnf-201ENSMUST00000053317 Fat2Q5F226 4351 aa3.71□□□□□ -1.81
Bdnf-201ENSMUST00000053317 Camk2n1Q6QWF9 78 aa3.69□□□□□ -1.82
Bdnf-201ENSMUST00000053317 Gm19426M0QWC7 77 aa3.68□□□□□ -1.82
Bdnf-201ENSMUST00000053317 Pkhd1l1Q80ZA4 4249 aa3.68□□□□□ -1.82
Bdnf-201ENSMUST00000053317 Ush2AQ2QI47 5193 aa3.67□□□□□ -1.82
Bdnf-201ENSMUST00000053317 Cox6b2Q80ZN9 88 aa3.67□□□□□ -1.82
Bdnf-201ENSMUST00000053317 Vps13bQ80TY5 3993 aa3.64□□□□□ -1.83
Bdnf-201ENSMUST00000053317 4932415D10RikA0A1W2P6U8 4986 aa3.63□□□□□ -1.83
Bdnf-201ENSMUST00000053317 Gm7735D3YX18 52 aa3.63□□□□□ -1.83
Bdnf-201ENSMUST00000053317 LorP18165 486 aa3.62□□□□□ -1.83
Bdnf-201ENSMUST00000053317 Prm1P02319 51 aa3.61□□□□□ -1.83
Bdnf-201ENSMUST00000053317 Gm20537G3UYK7 97 aa3.6□□□□□ -1.83
Bdnf-201ENSMUST00000053317 Gm21887J3QQ04 176 aa3.6□□□□□ -1.83
Bdnf-201ENSMUST00000053317 BC029722A0A0N4SW31 51 aa3.59□□□□□ -1.83
Bdnf-201ENSMUST00000053317 Krtap4-2B1AQ85 167 aa3.57□□□□□ -1.84
Bdnf-201ENSMUST00000053317 Gm9789Q8BIG3 52 aa3.56□□□□□ -1.84
Bdnf-201ENSMUST00000053317 Gm19402J3QJV4 266 aa3.55□□□□□ -1.84
Bdnf-201ENSMUST00000053317 Hmcn2A2AJ76 5100 aa3.51□□□□□ -1.85
Bdnf-201ENSMUST00000053317 Krtap1-3A2A588 173 aa3.46□□□□□ -1.86
Bdnf-201ENSMUST00000053317 ZanO88799 5376 aa3.45□□□□□ -1.86
Bdnf-201ENSMUST00000053317 Gm40193A0A1B0GT39 78 aa3.43□□□□□ -1.86
Bdnf-201ENSMUST00000053317 2310079G19RikQ9D6L6 185 aa3.41□□□□□ -1.86
Bdnf-201ENSMUST00000053317 Fat4Q2PZL6 4981 aa3.41□□□□□ -1.86
Bdnf-201ENSMUST00000053317 Rnf213E9Q555 5152 aaKnown RBP3.4□□□□□ -1.86
Bdnf-201ENSMUST00000053317 Krtap13-1Q8K198 168 aa3.39□□□□□ -1.87
Bdnf-201ENSMUST00000053317 Gm17416Q30KP4 66 aa3.37□□□□□ -1.87
Bdnf-201ENSMUST00000053317 Krtap16-3Q8C1I6 86 aa3.37□□□□□ -1.87
Bdnf-201ENSMUST00000053317 Krtap19-3Q925H6 87 aa3.37□□□□□ -1.87
Bdnf-201ENSMUST00000053317 Tnp1P10856 55 aa3.36□□□□□ -1.87
Bdnf-201ENSMUST00000053317 Mdn1A2ANY6 5589 aaKnown RBP3.35□□□□□ -1.87
Bdnf-201ENSMUST00000053317 B930094E09RikQ8C4T2 136 aa3.35□□□□□ -1.87
Bdnf-201ENSMUST00000053317 Krtap19-1Q925H2 87 aa3.32□□□□□ -1.88
Bdnf-201ENSMUST00000053317 2210017I01RikA0A0A6YVV1 95 aa3.3□□□□□ -1.88
Bdnf-201ENSMUST00000053317 Gm10061D3Z714 54 aa3.27□□□□□ -1.89
Bdnf-201ENSMUST00000053317 Gm11569B1AQB1 180 aa3.24□□□□□ -1.89
Bdnf-201ENSMUST00000053317 Krtap1-5A2A590 122 aa3.17□□□□□ -1.9
Bdnf-201ENSMUST00000053317 Krtap3-1A2A591 98 aa3.17□□□□□ -1.9
Bdnf-201ENSMUST00000053317 Krtap9-5A2A5X3 358 aa3.15□□□□□ -1.91
Bdnf-201ENSMUST00000053317 Lce1dQ9D731 133 aa3.15□□□□□ -1.91
Bdnf-201ENSMUST00000053317 Krtap1-4Q3V2D6 188 aa3.13□□□□□ -1.91
Bdnf-201ENSMUST00000053317 Gm19668J3QMD1 248 aa3.12□□□□□ -1.91
Bdnf-201ENSMUST00000053317 Krtap17-1A2A5X6 109 aa3.12□□□□□ -1.91
Bdnf-201ENSMUST00000053317 Krtap12-1Q9Z287 130 aa3.11□□□□□ -1.91
Bdnf-201ENSMUST00000053317 Lce1gQ9D195 139 aa3.1□□□□□ -1.91
Bdnf-201ENSMUST00000053317 Gm38119A0A0A6YX29 146 aa3.08□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Lce1jD3YUU5 139 aa3.08□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Krtap4-6Q3V4B7 195 aa3.07□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Krtap19-2Q925I0 141 aa3.06□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Syne2Q6ZWQ0 6874 aaKnown RBP3.05□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Krtap19-9aF8WH65 55 aa3.05□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Fsip2A2ARZ3 6995 aa3.04□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Gm17402F6Z0L5 76 aa3.04□□□□□ -1.92
Bdnf-201ENSMUST00000053317 Lce1a1Q9CQH5 143 aa3.01□□□□□ -1.93
Bdnf-201ENSMUST00000053317 Krtap7-1Q9D3I6 87 aa3□□□□□ -1.93
Bdnf-201ENSMUST00000053317 Gm11596B1AQB0 205 aa3□□□□□ -1.93
Bdnf-201ENSMUST00000053317 Sprr2kO70562 68 aa2.96□□□□□ -1.94
Bdnf-201ENSMUST00000053317 Gm11562A0PK51 136 aa2.95□□□□□ -1.94
Bdnf-201ENSMUST00000053317 4933428G20RikQ9D3X4 101 aa2.95□□□□□ -1.94
Bdnf-201ENSMUST00000053317 Krtap8-1O08633 61 aa2.94□□□□□ -1.94
Bdnf-201ENSMUST00000053317 SspoQ8CG65 4998 aa2.94□□□□□ -1.94
Bdnf-201ENSMUST00000053317 Muc5bE9Q5I3 4800 aa2.94□□□□□ -1.94
Bdnf-201ENSMUST00000053317 Gm6358A0A087WPH4 74 aa2.92□□□□□ -1.94
Bdnf-201ENSMUST00000053317 Gm11564A2A4L9 201 aa2.89□□□□□ -1.95
Bdnf-201ENSMUST00000053317 Gm11595B1AQA7 289 aa2.89□□□□□ -1.95
Bdnf-201ENSMUST00000053317 Krtap4-8B1AQA8 209 aa2.89□□□□□ -1.95
Bdnf-201ENSMUST00000053317 Mt4P47945 62 aa2.89□□□□□ -1.95
Bdnf-201ENSMUST00000053317 Mt2P02798 61 aa2.87□□□□□ -1.95
Bdnf-201ENSMUST00000053317 Krtap4-9B1AQA9 244 aa2.85□□□□□ -1.95
Bdnf-201ENSMUST00000053317 Lce1lQ9D1G7 135 aa2.85□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 113.5 ms