RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Pkhd1E9PZ36 4059 aa4.08□□□□□ -1.76
Ccdc39-201ENSMUST00000029222 Sec61bQ9CQS8 96 aaKnown RBP4.06□□□□□ -1.76
Ccdc39-201ENSMUST00000029222 Cox6b2Q80ZN9 88 aa4.06□□□□□ -1.76
Ccdc39-201ENSMUST00000029222 Pkhd1l1Q80ZA4 4249 aa4.05□□□□□ -1.76
Ccdc39-201ENSMUST00000029222 Dnah8Q91XQ0 4731 aa4.04□□□□□ -1.76
Ccdc39-201ENSMUST00000029222 Gm10382Q3V0T5 144 aa4.03□□□□□ -1.76
Ccdc39-201ENSMUST00000029222 Gm10318A0A1W2P728 225 aa4.03□□□□□ -1.76
Ccdc39-201ENSMUST00000029222 Crct1Q6PAI5 102 aa4□□□□□ -1.77
Ccdc39-201ENSMUST00000029222 Gm3880A0A1B0GSB3 72 aa3.98□□□□□ -1.77
Ccdc39-201ENSMUST00000029222 A0A286YCP9 139 aa3.98□□□□□ -1.77
Ccdc39-201ENSMUST00000029222 PcloQ9QYX7 5068 aa3.98□□□□□ -1.77
Ccdc39-201ENSMUST00000029222 Fam229aB2KGE5 128 aa3.97□□□□□ -1.77
Ccdc39-201ENSMUST00000029222 Gm3646F6S692 53 aa3.97□□□□□ -1.77
Ccdc39-201ENSMUST00000029222 Dnhd1D3Z2X2 4750 aa3.94□□□□□ -1.78
Ccdc39-201ENSMUST00000029222 Gm9955Q8CEJ8 102 aa3.93□□□□□ -1.78
Ccdc39-201ENSMUST00000029222 Gm17416Q30KP4 66 aa3.93□□□□□ -1.78
Ccdc39-201ENSMUST00000029222 Spink7Q6IE32 76 aa3.9□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Pla2g10Q9QXX3 151 aa3.9□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Birc6O88738 4882 aa3.89□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 BC029722A0A0N4SW31 51 aa3.89□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Gm12216A0A1W2P827 62 aa3.87□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Herc1E9PZP8 4859 aa3.87□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 2210017I01RikA0A0A6YVV1 95 aa3.86□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Krtap13-1Q8K198 168 aa3.86□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Gm20537G3UYK7 97 aa3.85□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Gm19426M0QWC7 77 aa3.84□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 CriptO70333 101 aa3.84□□□□□ -1.79
Ccdc39-201ENSMUST00000029222 Gm18596A0A1W2P860 280 aa3.83□□□□□ -1.8
Ccdc39-201ENSMUST00000029222 Lce1mQ9CR91 182 aa3.83□□□□□ -1.8
Ccdc39-201ENSMUST00000029222 Krtap3-1A2A591 98 aa3.81□□□□□ -1.8
Ccdc39-201ENSMUST00000029222 Ubr4A2AN08 5180 aa3.73□□□□□ -1.81
Ccdc39-201ENSMUST00000029222 Gm20538F6Z9R1 75 aa3.72□□□□□ -1.81
Ccdc39-201ENSMUST00000029222 LorP18165 486 aa3.7□□□□□ -1.82
Ccdc39-201ENSMUST00000029222 Krtap16-3Q8C1I6 86 aa3.7□□□□□ -1.82
Ccdc39-201ENSMUST00000029222 A0A1Y7VJ07 166 aa3.68□□□□□ -1.82
Ccdc39-201ENSMUST00000029222 Romo1P60603 79 aa3.67□□□□□ -1.82
Ccdc39-201ENSMUST00000029222 Krtap1-5A2A590 122 aa3.65□□□□□ -1.83
Ccdc39-201ENSMUST00000029222 B930094E09RikQ8C4T2 136 aa3.65□□□□□ -1.83
Ccdc39-201ENSMUST00000029222 Krtap19-3Q925H6 87 aa3.64□□□□□ -1.83
Ccdc39-201ENSMUST00000029222 Ush2AQ2QI47 5193 aa3.64□□□□□ -1.83
Ccdc39-201ENSMUST00000029222 Krtap19-1Q925H2 87 aa3.63□□□□□ -1.83
Ccdc39-201ENSMUST00000029222 Gm19402J3QJV4 266 aa3.61□□□□□ -1.83
Ccdc39-201ENSMUST00000029222 Gm21887J3QQ04 176 aa3.61□□□□□ -1.83
Ccdc39-201ENSMUST00000029222 Camk2n1Q6QWF9 78 aa3.59□□□□□ -1.84
Ccdc39-201ENSMUST00000029222 Krtap1-3A2A588 173 aa3.58□□□□□ -1.84
Ccdc39-201ENSMUST00000029222 ZanO88799 5376 aa3.58□□□□□ -1.84
Ccdc39-201ENSMUST00000029222 4932415D10RikA0A1W2P6U8 4986 aa3.56□□□□□ -1.84
Ccdc39-201ENSMUST00000029222 Fat4Q2PZL6 4981 aa3.56□□□□□ -1.84
Ccdc39-201ENSMUST00000029222 Mp68P56379 58 aa3.54□□□□□ -1.84
Ccdc39-201ENSMUST00000029222 Gm7735D3YX18 52 aa3.53□□□□□ -1.84
Ccdc39-201ENSMUST00000029222 Prm1P02319 51 aa3.52□□□□□ -1.85
Ccdc39-201ENSMUST00000029222 Gm9789Q8BIG3 52 aa3.52□□□□□ -1.85
Ccdc39-201ENSMUST00000029222 Hmcn2A2AJ76 5100 aa3.51□□□□□ -1.85
Ccdc39-201ENSMUST00000029222 Krtap1-4Q3V2D6 188 aa3.51□□□□□ -1.85
Ccdc39-201ENSMUST00000029222 Gm17402F6Z0L5 76 aa3.48□□□□□ -1.85
Ccdc39-201ENSMUST00000029222 Rnf213E9Q555 5152 aaKnown RBP3.46□□□□□ -1.86
Ccdc39-201ENSMUST00000029222 Sprr2a3Q4KL71 83 aa3.43□□□□□ -1.86
Ccdc39-201ENSMUST00000029222 Sprr2a1Q9CQK8 83 aa3.43□□□□□ -1.86
Ccdc39-201ENSMUST00000029222 Krtap12-1Q9Z287 130 aa3.43□□□□□ -1.86
Ccdc39-201ENSMUST00000029222 Lce1jD3YUU5 139 aa3.41□□□□□ -1.86
Ccdc39-201ENSMUST00000029222 A030014E15RikA0A1Y7VJV2 120 aa3.4□□□□□ -1.87
Ccdc39-201ENSMUST00000029222 Gm19668J3QMD1 248 aa3.39□□□□□ -1.87
Ccdc39-201ENSMUST00000029222 Krtap19-9aF8WH65 55 aa3.39□□□□□ -1.87
Ccdc39-201ENSMUST00000029222 Krtap4-1Q3UUY3 169 aa3.37□□□□□ -1.87
Ccdc39-201ENSMUST00000029222 Prm2P07978 107 aa3.34□□□□□ -1.87
Ccdc39-201ENSMUST00000029222 Krtap9-5A2A5X3 358 aa3.33□□□□□ -1.88
Ccdc39-201ENSMUST00000029222 Krtap17-1A2A5X6 109 aa3.33□□□□□ -1.88
Ccdc39-201ENSMUST00000029222 Mdn1A2ANY6 5589 aaKnown RBP3.29□□□□□ -1.88
Ccdc39-201ENSMUST00000029222 Krtap19-2Q925I0 141 aa3.27□□□□□ -1.89
Ccdc39-201ENSMUST00000029222 Gm40193A0A1B0GT39 78 aa3.27□□□□□ -1.89
Ccdc39-201ENSMUST00000029222 Gm10061D3Z714 54 aa3.26□□□□□ -1.89
Ccdc39-201ENSMUST00000029222 Gm11555B1AQ89 175 aa3.2□□□□□ -1.9
Ccdc39-201ENSMUST00000029222 Tnp1P10856 55 aa3.2□□□□□ -1.9
Ccdc39-201ENSMUST00000029222 Krtap7-1Q9D3I6 87 aa3.2□□□□□ -1.9
Ccdc39-201ENSMUST00000029222 Lce1iQ9D6P5 149 aa3.16□□□□□ -1.9
Ccdc39-201ENSMUST00000029222 Gm11563B1AQ90 168 aa3.15□□□□□ -1.91
Ccdc39-201ENSMUST00000029222 Krtap4-7Q9D732 168 aa3.15□□□□□ -1.91
Ccdc39-201ENSMUST00000029222 Gm11569B1AQB1 180 aa3.13□□□□□ -1.91
Ccdc39-201ENSMUST00000029222 Ndufaf8A2AMZ4 74 aa3.13□□□□□ -1.91
Ccdc39-201ENSMUST00000029222 Lce1a2Q9D1K4 149 aa3.12□□□□□ -1.91
Ccdc39-201ENSMUST00000029222 Krtap19-9bQ99NG9 58 aa3.11□□□□□ -1.91
Ccdc39-201ENSMUST00000029222 Mt2P02798 61 aa3.1□□□□□ -1.91
Ccdc39-201ENSMUST00000029222 Gm6358A0A087WPH4 74 aa3.08□□□□□ -1.92
Ccdc39-201ENSMUST00000029222 SspoQ8CG65 4998 aa3.06□□□□□ -1.92
Ccdc39-201ENSMUST00000029222 Krtap8-1O08633 61 aa3.06□□□□□ -1.92
Ccdc39-201ENSMUST00000029222 Gm9112A2AI92 75 aa2.97□□□□□ -1.93
Ccdc39-201ENSMUST00000029222 Muc5bE9Q5I3 4800 aa2.96□□□□□ -1.94
Ccdc39-201ENSMUST00000029222 Krtap22-2J3QNX6 67 aa2.94□□□□□ -1.94
Ccdc39-201ENSMUST00000029222 Krtap9-3Q3V2C1 136 aa2.94□□□□□ -1.94
Ccdc39-201ENSMUST00000029222 Krtap4-6Q3V4B7 195 aa2.93□□□□□ -1.94
Ccdc39-201ENSMUST00000029222 Fsip2A2ARZ3 6995 aa2.93□□□□□ -1.94
Ccdc39-201ENSMUST00000029222 Krtap4-2B1AQ85 167 aa2.92□□□□□ -1.94
Ccdc39-201ENSMUST00000029222 Lce1hQ9D6R3 140 aa2.87□□□□□ -1.95
Ccdc39-201ENSMUST00000029222 Lce1gQ9D195 139 aa2.87□□□□□ -1.95
Ccdc39-201ENSMUST00000029222 Gm10272F7CZ33 110 aa2.83□□□□□ -1.96
Ccdc39-201ENSMUST00000029222 Syne2Q6ZWQ0 6874 aaKnown RBP2.81□□□□□ -1.96
Ccdc39-201ENSMUST00000029222 Gm38119A0A0A6YX29 146 aa2.81□□□□□ -1.96
Ccdc39-201ENSMUST00000029222 Sprr2kO70562 68 aa2.81□□□□□ -1.96
Ccdc39-201ENSMUST00000029222 Gm11596B1AQB0 205 aa2.79□□□□□ -1.96
Ccdc39-201ENSMUST00000029222 Mt4P47945 62 aa2.79□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms