RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 2210017I01RikA0A0A6YVV1 95 aa9.23□□□□□ -0.93
Chmp6-201ENSMUST00000026434 Sec61bQ9CQS8 96 aaKnown RBP9.21□□□□□ -0.93
Chmp6-201ENSMUST00000026434 Gm9955Q8CEJ8 102 aa9.16□□□□□ -0.94
Chmp6-201ENSMUST00000026434 Krtap3-1A2A591 98 aa9.13□□□□□ -0.95
Chmp6-201ENSMUST00000026434 Pla2g10Q9QXX3 151 aa9.12□□□□□ -0.95
Chmp6-201ENSMUST00000026434 Lrp2A2ARV4 4660 aa9.07□□□□□ -0.96
Chmp6-201ENSMUST00000026434 1700042G07RikB1AUF7 90 aa9.05□□□□□ -0.96
Chmp6-201ENSMUST00000026434 Gm10382Q3V0T5 144 aa9.04□□□□□ -0.96
Chmp6-201ENSMUST00000026434 4932415D10RikA0A1W2P6U8 4986 aa9.03□□□□□ -0.96
Chmp6-201ENSMUST00000026434 Gm20537G3UYK7 97 aa9.03□□□□□ -0.96
Chmp6-201ENSMUST00000026434 Ush2AQ2QI47 5193 aa9.01□□□□□ -0.97
Chmp6-201ENSMUST00000026434 Prm1P02319 51 aa8.99□□□□□ -0.97
Chmp6-201ENSMUST00000026434 Gm7735D3YX18 52 aa8.98□□□□□ -0.97
Chmp6-201ENSMUST00000026434 Krtap17-1A2A5X6 109 aa8.93□□□□□ -0.98
Chmp6-201ENSMUST00000026434 Ubr4A2AN08 5180 aa8.91□□□□□ -0.98
Chmp6-201ENSMUST00000026434 Krtap13-1Q8K198 168 aa8.89□□□□□ -0.99
Chmp6-201ENSMUST00000026434 BC029722A0A0N4SW31 51 aa8.86□□□□□ -0.99
Chmp6-201ENSMUST00000026434 Fam229aB2KGE5 128 aa8.86□□□□□ -0.99
Chmp6-201ENSMUST00000026434 Hmcn2A2AJ76 5100 aa8.83□□□□□ -1
Chmp6-201ENSMUST00000026434 2310057N15RikQ9D6T8 200 aa8.82□□□□□ -1
Chmp6-201ENSMUST00000026434 Krtap1-5A2A590 122 aa8.82□□□□□ -1
Chmp6-201ENSMUST00000026434 Gm9789Q8BIG3 52 aa8.81□□□□□ -1
Chmp6-201ENSMUST00000026434 Gm3880A0A1B0GSB3 72 aa8.78□□□□□ -1
Chmp6-201ENSMUST00000026434 Gm17402F6Z0L5 76 aa8.71□□□□□ -1.02
Chmp6-201ENSMUST00000026434 Gm12216A0A1W2P827 62 aa8.61□□□□□ -1.03
Chmp6-201ENSMUST00000026434 Krtap16-3Q8C1I6 86 aa8.61□□□□□ -1.03
Chmp6-201ENSMUST00000026434 Romo1P60603 79 aa8.55□□□□□ -1.04
Chmp6-201ENSMUST00000026434 B930094E09RikQ8C4T2 136 aa8.55□□□□□ -1.04
Chmp6-201ENSMUST00000026434 Krtap19-1Q925H2 87 aa8.55□□□□□ -1.04
Chmp6-201ENSMUST00000026434 Gm19426M0QWC7 77 aa8.48□□□□□ -1.05
Chmp6-201ENSMUST00000026434 Krtap19-3Q925H6 87 aa8.48□□□□□ -1.05
Chmp6-201ENSMUST00000026434 CriptO70333 101 aa8.43□□□□□ -1.06
Chmp6-201ENSMUST00000026434 Gm19402J3QJV4 266 aa8.35□□□□□ -1.07
Chmp6-201ENSMUST00000026434 Sprr2a3Q4KL71 83 aa8.32□□□□□ -1.08
Chmp6-201ENSMUST00000026434 Sprr2a1Q9CQK8 83 aa8.32□□□□□ -1.08
Chmp6-201ENSMUST00000026434 Gm11562A0PK51 136 aa8.31□□□□□ -1.08
Chmp6-201ENSMUST00000026434 Crct1Q6PAI5 102 aa8.31□□□□□ -1.08
Chmp6-201ENSMUST00000026434 Spink7Q6IE32 76 aa8.28□□□□□ -1.08
Chmp6-201ENSMUST00000026434 Krtap1-3A2A588 173 aa8.26□□□□□ -1.09
Chmp6-201ENSMUST00000026434 Krtap1-4Q3V2D6 188 aa8.22□□□□□ -1.09
Chmp6-201ENSMUST00000026434 Gm10318A0A1W2P728 225 aa8.2□□□□□ -1.1
Chmp6-201ENSMUST00000026434 ZanO88799 5376 aa8.2□□□□□ -1.1
Chmp6-201ENSMUST00000026434 Fat4Q2PZL6 4981 aa8.14□□□□□ -1.11
Chmp6-201ENSMUST00000026434 Gm21887J3QQ04 176 aa8.14□□□□□ -1.11
Chmp6-201ENSMUST00000026434 LorP18165 486 aa7.96□□□□□ -1.14
Chmp6-201ENSMUST00000026434 Rnf213E9Q555 5152 aaKnown RBP7.94□□□□□ -1.14
Chmp6-201ENSMUST00000026434 Krtap4-2B1AQ85 167 aa7.93□□□□□ -1.14
Chmp6-201ENSMUST00000026434 Krtap12-1Q9Z287 130 aa7.92□□□□□ -1.14
Chmp6-201ENSMUST00000026434 Gm40193A0A1B0GT39 78 aa7.91□□□□□ -1.14
Chmp6-201ENSMUST00000026434 Krtap19-9aF8WH65 55 aa7.91□□□□□ -1.14
Chmp6-201ENSMUST00000026434 Camk2n1Q6QWF9 78 aa7.88□□□□□ -1.15
Chmp6-201ENSMUST00000026434 Gm19668J3QMD1 248 aa7.87□□□□□ -1.15
Chmp6-201ENSMUST00000026434 Lce1jD3YUU5 139 aa7.8□□□□□ -1.16
Chmp6-201ENSMUST00000026434 Gm10061D3Z714 54 aa7.76□□□□□ -1.17
Chmp6-201ENSMUST00000026434 Gm11569B1AQB1 180 aa7.76□□□□□ -1.17
Chmp6-201ENSMUST00000026434 Krtap7-1Q9D3I6 87 aa7.75□□□□□ -1.17
Chmp6-201ENSMUST00000026434 Mp68P56379 58 aa7.73□□□□□ -1.17
Chmp6-201ENSMUST00000026434 Lce1gQ9D195 139 aa7.71□□□□□ -1.17
Chmp6-201ENSMUST00000026434 Syne2Q6ZWQ0 6874 aaKnown RBP7.66□□□□□ -1.18
Chmp6-201ENSMUST00000026434 SspoQ8CG65 4998 aa7.63□□□□□ -1.19
Chmp6-201ENSMUST00000026434 Prm2P07978 107 aa7.62□□□□□ -1.19
Chmp6-201ENSMUST00000026434 Krtap19-2Q925I0 141 aa7.54□□□□□ -1.2
Chmp6-201ENSMUST00000026434 Krtap9-5A2A5X3 358 aa7.46□□□□□ -1.22
Chmp6-201ENSMUST00000026434 Krtap8-1O08633 61 aa7.42□□□□□ -1.22
Chmp6-201ENSMUST00000026434 Gm11555B1AQ89 175 aa7.41□□□□□ -1.22
Chmp6-201ENSMUST00000026434 Gm11596B1AQB0 205 aa7.4□□□□□ -1.22
Chmp6-201ENSMUST00000026434 Gm20538F6Z9R1 75 aa7.37□□□□□ -1.23
Chmp6-201ENSMUST00000026434 Tnp1P10856 55 aa7.36□□□□□ -1.23
Chmp6-201ENSMUST00000026434 Krtap19-9bQ99NG9 58 aa7.34□□□□□ -1.23
Chmp6-201ENSMUST00000026434 Lce1iQ9D6P5 149 aa7.34□□□□□ -1.23
Chmp6-201ENSMUST00000026434 Muc5bE9Q5I3 4800 aa7.29□□□□□ -1.24
Chmp6-201ENSMUST00000026434 Lce1a2Q9D1K4 149 aa7.24□□□□□ -1.25
Chmp6-201ENSMUST00000026434 Mdn1A2ANY6 5589 aaKnown RBP7.2□□□□□ -1.26
Chmp6-201ENSMUST00000026434 Krtap4-6Q3V4B7 195 aa7.19□□□□□ -1.26
Chmp6-201ENSMUST00000026434 Gm6358A0A087WPH4 74 aa7.08□□□□□ -1.28
Chmp6-201ENSMUST00000026434 Krtap4-1Q3UUY3 169 aa7.06□□□□□ -1.28
Chmp6-201ENSMUST00000026434 Mt2P02798 61 aa7□□□□□ -1.29
Chmp6-201ENSMUST00000026434 2310046K23RikA0A0A6YVW6 87 aa6.97□□□□□ -1.29
Chmp6-201ENSMUST00000026434 Ndufaf8A2AMZ4 74 aa6.96□□□□□ -1.29
Chmp6-201ENSMUST00000026434 Gm11564A2A4L9 201 aa6.92□□□□□ -1.3
Chmp6-201ENSMUST00000026434 Gm11563B1AQ90 168 aa6.92□□□□□ -1.3
Chmp6-201ENSMUST00000026434 Gm11595B1AQA7 289 aa6.92□□□□□ -1.3
Chmp6-201ENSMUST00000026434 Krtap4-8B1AQA8 209 aa6.92□□□□□ -1.3
Chmp6-201ENSMUST00000026434 Fsip2A2ARZ3 6995 aa6.73□□□□□ -1.33
Chmp6-201ENSMUST00000026434 Krtap9-3Q3V2C1 136 aa6.71□□□□□ -1.34
Chmp6-201ENSMUST00000026434 Krtap4-9B1AQA9 244 aa6.7□□□□□ -1.34
Chmp6-201ENSMUST00000026434 Lce1hQ9D6R3 140 aa6.69□□□□□ -1.34
Chmp6-201ENSMUST00000026434 Krtap22-2J3QNX6 67 aa6.67□□□□□ -1.34
Chmp6-201ENSMUST00000026434 Mt4P47945 62 aa6.53□□□□□ -1.36
Chmp6-201ENSMUST00000026434 Krtap6-3A0A087WQL6 57 aa6.5□□□□□ -1.37
Chmp6-201ENSMUST00000026434 Krtap4-13Q9D7P3 165 aa6.45□□□□□ -1.38
Chmp6-201ENSMUST00000026434 Krtap4-7Q9D732 168 aa6.43□□□□□ -1.38
Chmp6-201ENSMUST00000026434 Lce1lQ9D1G7 135 aa6.25□□□□□ -1.41
Chmp6-201ENSMUST00000026434 Sprr2kO70562 68 aa6.23□□□□□ -1.41
Chmp6-201ENSMUST00000026434 Gm10272F7CZ33 110 aa6.22□□□□□ -1.41
Chmp6-201ENSMUST00000026434 Sprr2gO70558 76 aa6.22□□□□□ -1.41
Chmp6-201ENSMUST00000026434 Sprr2dO70555 85 aa6.18□□□□□ -1.42
Chmp6-201ENSMUST00000026434 Lce1bQ9D149 137 aa6.18□□□□□ -1.42
Chmp6-201ENSMUST00000026434 Gm11938Q9D3H4 131 aa6.17□□□□□ -1.42
Chmp6-201ENSMUST00000026434 Gm9112A2AI92 75 aa6.13□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 85.2 ms