RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YJL213WP40896 331 aa0.29□□□□□ -2.36
snR50snR50 IAH1P41734 238 aa0.29□□□□□ -2.36
snR50snR50 IES1P43579 692 aa0.29□□□□□ -2.36
snR50snR50 TIS11P47977 285 aa0.29□□□□□ -2.36
snR50snR50 COS10P52924 374 aa0.29□□□□□ -2.36
snR50snR50 RTA1P53047 317 aa0.29□□□□□ -2.36
snR50snR50 YGR125WP53273 1036 aa0.29□□□□□ -2.36
snR50snR50 RNH70P53331 553 aa0.29□□□□□ -2.36
snR50snR50 ATG33Q06485 197 aa0.29□□□□□ -2.36
snR50snR50 TMC1Q08422 150 aaPredicted RBP0.29□□□□□ -2.36
snR50snR50 RPS17AP02407 136 aaKnown RBP0.28□□□□□ -2.36
snR50snR50 CBP1P07252 654 aa0.28□□□□□ -2.36
snR50snR50 MRS3P10566 314 aa0.28□□□□□ -2.36
snR50snR50 RPS17BP14127 136 aaKnown RBP0.28□□□□□ -2.36
snR50snR50 ISY1P21374 235 aaPredicted RBP0.28□□□□□ -2.36
snR50snR50 GSY1P23337 708 aa0.28□□□□□ -2.36
snR50snR50 PTC6P25646 442 aa0.28□□□□□ -2.36
snR50snR50 MID2P36027 376 aa0.28□□□□□ -2.36
snR50snR50 AGP2P38090 596 aa0.28□□□□□ -2.36
snR50snR50 EHT1P38295 451 aa0.28□□□□□ -2.36
snR50snR50 YHR020WP38708 688 aaKnown RBP0.28□□□□□ -2.36
snR50snR50 VAC8P39968 578 aa0.28□□□□□ -2.36
snR50snR50 YRB30P53107 440 aaPredicted RBP0.28□□□□□ -2.36
snR50snR50 MET13P53128 600 aa0.28□□□□□ -2.36
snR50snR50 TAM41P53230 385 aa0.28□□□□□ -2.36
snR50snR50 DNM1P54861 757 aa0.28□□□□□ -2.36
snR50snR50 SMA1Q02651 245 aa0.28□□□□□ -2.36
snR50snR50 ERP1Q05359 219 aaKnown RBP0.28□□□□□ -2.36
snR50snR50 THI3Q07471 609 aa0.28□□□□□ -2.36
snR50snR50 YDL242WQ07746 117 aa0.28□□□□□ -2.36
snR50snR50 MCH4Q08268 501 aa0.28□□□□□ -2.36
snR50snR50 LEA1Q08963 238 aaPredicted RBP0.28□□□□□ -2.36
snR50snR50 BSC1Q12140 328 aa0.28□□□□□ -2.36
snR50snR50 RRP12Q12754 1228 aaKnown RBP0.28□□□□□ -2.36
snR50snR50 HMG1P12683 1054 aa0.27□□□□□ -2.37
snR50snR50 HMG2P12684 1045 aa0.27□□□□□ -2.37
snR50snR50 GLN3P18494 730 aa0.27□□□□□ -2.37
snR50snR50 YKL097CP34245 136 aa0.27□□□□□ -2.37
snR50snR50 PEA2P40091 420 aa0.27□□□□□ -2.37
snR50snR50 IDP2P41939 412 aa0.27□□□□□ -2.37
snR50snR50 BFA1P47113 574 aa0.27□□□□□ -2.37
snR50snR50 YGL036WP53185 909 aaPredicted RBP0.27□□□□□ -2.37
snR50snR50 RPM2Q02773 1202 aa0.27□□□□□ -2.37
snR50snR50 UBP16Q02863 499 aa0.27□□□□□ -2.37
snR50snR50 YML119WQ03208 357 aa0.27□□□□□ -2.37
snR50snR50 UTP21Q06078 939 aaPredicted RBP0.27□□□□□ -2.37
snR50snR50 FRE3Q08905 711 aa0.27□□□□□ -2.37
snR50snR50 FLC1Q08967 793 aa0.27□□□□□ -2.37
snR50snR50 SSF2Q12153 453 aaPredicted RBP0.27□□□□□ -2.37
snR50snR50 YRM1Q12340 786 aa0.27□□□□□ -2.37
snR50snR50 RPL15AP05748 204 aaKnown RBP0.26□□□□□ -2.37
snR50snR50 ILV2P07342 687 aaKnown RBP0.26□□□□□ -2.37
snR50snR50 PRB1P09232 635 aa0.26□□□□□ -2.37
snR50snR50 SEC12P11655 471 aa0.26□□□□□ -2.37
snR50snR50 PMR1P13586 950 aa0.26□□□□□ -2.37
snR50snR50 PRP45P28004 379 aaPredicted RBP0.26□□□□□ -2.37
snR50snR50 MF(ALPHA)2P32435 120 aa0.26□□□□□ -2.37
snR50snR50 MRP21P38175 177 aa0.26□□□□□ -2.37
snR50snR50 YHR033WP38690 423 aa0.26□□□□□ -2.37
snR50snR50 YGR210CP42942 411 aa0.26□□□□□ -2.37
snR50snR50 ASK10P48361 1146 aa0.26□□□□□ -2.37
snR50snR50 YOL159CQ08300 171 aa0.26□□□□□ -2.37
snR50snR50 WRS1Q12109 432 aaKnown RBP0.26□□□□□ -2.37
snR50snR50 GIN4Q12263 1142 aa0.26□□□□□ -2.37
snR50snR50 YBL111CQ3E7Y5 667 aa0.26□□□□□ -2.37
snR50snR50 SPT15P13393 240 aaKnown RBP0.25□□□□□ -2.37
snR50snR50 MCK1P21965 375 aaKnown RBP0.25□□□□□ -2.37
snR50snR50 PCL2P25693 308 aa0.25□□□□□ -2.37
snR50snR50 YIM1P28625 365 aa0.25□□□□□ -2.37
snR50snR50 AGA1P32323 725 aa0.25□□□□□ -2.37
snR50snR50 YME1P32795 747 aa0.25□□□□□ -2.37
snR50snR50 PDR3P33200 976 aa0.25□□□□□ -2.37
snR50snR50 MIC60P36112 540 aa0.25□□□□□ -2.37
snR50snR50 RPH1P39956 796 aa0.25□□□□□ -2.37
snR50snR50 PHM8P40025 321 aa0.25□□□□□ -2.37
snR50snR50 YEN1P40028 759 aa0.25□□□□□ -2.37
snR50snR50 YJL068CP40363 299 aa0.25□□□□□ -2.37
snR50snR50 GUF1P46943 645 aa0.25□□□□□ -2.37
snR50snR50 TIM54P47045 478 aa0.25□□□□□ -2.37
snR50snR50 PEF1P53238 335 aa0.25□□□□□ -2.37
snR50snR50 YPR003CP53394 754 aa0.25□□□□□ -2.37
snR50snR50 HST1P53685 503 aa0.25□□□□□ -2.37
snR50snR50 YNL234WP53857 426 aa0.25□□□□□ -2.37
snR50snR50 CTL1Q03220 320 aaKnown RBP0.25□□□□□ -2.37
snR50snR50 YDR415CQ04033 374 aaPredicted RBP0.25□□□□□ -2.37
snR50snR50 YML053CQ04978 212 aa0.25□□□□□ -2.37
snR50snR50 FPR4Q06205 392 aaPredicted RBP0.25□□□□□ -2.37
snR50snR50 JIP5Q06214 492 aaPredicted RBP0.25□□□□□ -2.37
snR50snR50 NOP8Q08287 484 aaPredicted RBP0.25□□□□□ -2.37
snR50snR50 FAP7Q12055 197 aaPredicted RBP0.25□□□□□ -2.37
snR50snR50 YPS3Q12303 508 aa0.25□□□□□ -2.37
snR50snR50 GID7P25569 745 aa0.24□□□□□ -2.37
snR50snR50 RPF2P36160 344 aaKnown RBP0.24□□□□□ -2.37
snR50snR50 RCK2P38623 610 aa0.24□□□□□ -2.37
snR50snR50 RGI2P40188 164 aa0.24□□□□□ -2.37
snR50snR50 FET5P43561 622 aa0.24□□□□□ -2.37
snR50snR50 COS12P53053 380 aa0.24□□□□□ -2.37
snR50snR50 AIM14P53109 570 aa0.24□□□□□ -2.37
snR50snR50 EKI1Q03764 534 aa0.24□□□□□ -2.37
snR50snR50 TSA2Q04120 196 aa0.24□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms