RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	OKP1	P53298	406 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	MPS1	P54199	764 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	SDH1	Q00711	640 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	ACS1	Q01574	713 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	SED5	Q01590	340 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	RSC4	Q02206	625 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	TBF1	Q02457	562 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	RMI1	Q02685	241 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	PET117	Q02771	107 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	MUK1	Q02866	612 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	NOG1	Q02892	647 aa	Known RBP	2.69	□□□□□ -1.98
LCL1	YPL056C	UME1	Q03010	460 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	PKH3	Q03306	898 aa	Predicted RBP	2.69	□□□□□ -1.98
LCL1	YPL056C	YMR010W	Q03687	405 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	FMN1	Q03778	218 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	RAD33	Q04231	177 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	COQ9	Q05779	260 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	PNP1	Q05788	311 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	DUS3	Q06053	668 aa	Known RBP	2.69	□□□□□ -1.98
LCL1	YPL056C	YLR352W	Q06479	807 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	SWA2	Q06677	668 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	UBX5	Q06682	500 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	SUB2	Q07478	446 aa	Known RBP	2.69	□□□□□ -1.98
LCL1	YPL056C	SNX3	Q08826	162 aa	Known RBP	2.69	□□□□□ -1.98
LCL1	YPL056C	AIM41	Q12032	185 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	SSF2	Q12153	453 aa	Predicted RBP	2.69	□□□□□ -1.98
LCL1	YPL056C	MCD1	Q12158	566 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	NTO1	Q12311	748 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	DPH6	Q12429	685 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	ATG11	Q12527	1178 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	YHR213W-A	Q8TGT4	77 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	APM4	Q99186	491 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	RAD61	Q99359	647 aa		2.69	□□□□□ -1.98
LCL1	YPL056C	RPN13	O13563	156 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	CCP1	P00431	361 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
LCL1	YPL056C	ADE8	P04161	214 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	CMK2	P22517	447 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	PDC6	P26263	563 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	PEX3	P28795	441 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	PMT2	P31382	759 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	TFC1	P32367	649 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	KRE6	P32486	720 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	ANP1	P32629	500 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YKU70	P32807	602 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	IMP3	P32899	183 aa	Predicted RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	PEX6	P33760	1030 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YPT52	P36018	234 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	NUP133	P36161	1157 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	AKL1	P38080	1108 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	APM3	P38153	483 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	RXT2	P38255	430 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YBR138C	P38277	524 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YHL008C	P38750	627 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YHR045W	P38775	560 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	LNP1	P38878	278 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	SET5	P38890	526 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	CCT3	P39077	534 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	SEN34	P39707	275 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	GPB2	P39717	880 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	BIM1	P40013	344 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YJR061W	P40355	935 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	ATG32	P40458	529 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	QRI1	P43123	477 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	YFR018C	P43599	363 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	IRC6	P43615	237 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	AIP1	P46680	615 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	NMD5	P46970	1048 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	LSM1	P47017	172 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	MAD3	P47074	515 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	EMC2	P47133	292 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	RSM26	P47141	266 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YJR115W	P47152	169 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	MSE1	P48525	536 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YGR237C	P50089	785 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YPT32	P51996	222 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	NMA2	P53204	395 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YGR125W	P53273	1036 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	SOL4	P53315	255 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	DBP6	P53734	629 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	CAF40	P53829	373 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	SIW14	P53965	281 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	ZDS2	P54786	942 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	REC102	Q02721	264 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	SSY1	Q03770	852 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	BNA7	Q04066	261 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	TIF35	Q04067	274 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	IRC3	Q06683	689 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	DIB1	Q06819	143 aa	Predicted RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	RSC58	Q07979	502 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YAP7	Q08182	245 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	SKI7	Q08491	747 aa	Predicted RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	ALE1	Q08548	619 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YOR214C	Q12282	236 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	GTT2	Q12390	233 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	ATG31	Q12421	196 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	GRX6	Q12438	231 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	PGA3	Q12746	312 aa	Known RBP	2.68	□□□□□ -1.98
LCL1	YPL056C	YBR298C-A	Q8TGK4	73 aa		2.68	□□□□□ -1.98
LCL1	YPL056C	YOS9	Q99220	542 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms