RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C QCR6P00127 147 aa8.14□□□□□ -1.11
LSP1YPL004C IMA3P0CW40 589 aa8.14□□□□□ -1.11
LSP1YPL004C IMA4P0CW41 589 aa8.14□□□□□ -1.11
LSP1YPL004C SEC63P14906 663 aa8.14□□□□□ -1.11
LSP1YPL004C MNE1P24720 663 aa8.14□□□□□ -1.11
LSP1YPL004C PXA2P34230 853 aa8.14□□□□□ -1.11
LSP1YPL004C ALY1P36117 915 aa8.14□□□□□ -1.11
LSP1YPL004C TGL4P36165 910 aa8.14□□□□□ -1.11
LSP1YPL004C TEP1P53916 434 aa8.14□□□□□ -1.11
LSP1YPL004C UTP6Q02354 440 aaKnown RBP8.14□□□□□ -1.11
LSP1YPL004C RLI1Q03195 608 aaKnown RBP8.14□□□□□ -1.11
LSP1YPL004C VPS60Q03390 229 aa8.14□□□□□ -1.11
LSP1YPL004C YML053CQ04978 212 aa8.14□□□□□ -1.11
LSP1YPL004C IMA2Q08295 589 aa8.14□□□□□ -1.11
LSP1YPL004C RIO1Q12196 484 aaKnown RBP8.14□□□□□ -1.11
LSP1YPL004C ACO1P19414 778 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
LSP1YPL004C UBC6P33296 250 aaPredicted RBP8.13□□□□□ -1.11
LSP1YPL004C GIP1P38229 639 aa8.13□□□□□ -1.11
LSP1YPL004C PCL10P53124 433 aa8.13□□□□□ -1.11
LSP1YPL004C CDC14Q00684 551 aa8.13□□□□□ -1.11
LSP1YPL004C CDC73Q06697 393 aa8.13□□□□□ -1.11
LSP1YPL004C LDB18Q07887 179 aa8.13□□□□□ -1.11
LSP1YPL004C NOP14Q99207 810 aaKnown RBP8.13□□□□□ -1.11
LSP1YPL004C ACC1Q00955 2233 aaKnown RBP8.13□□□□□ -1.11
LSP1YPL004C GCR1P07261 785 aa8.12□□□□□ -1.11
LSP1YPL004C SCH9P11792 824 aaKnown RBP8.12□□□□□ -1.11
LSP1YPL004C PEP5P12868 1029 aa8.12□□□□□ -1.11
LSP1YPL004C PRP9P19736 530 aaKnown RBP8.12□□□□□ -1.11
LSP1YPL004C DCW1P36091 449 aa8.12□□□□□ -1.11
LSP1YPL004C YBP1P38315 674 aa8.12□□□□□ -1.11
LSP1YPL004C MSR1P38714 643 aa8.12□□□□□ -1.11
LSP1YPL004C RAD26P40352 1085 aa8.12□□□□□ -1.11
LSP1YPL004C PAN6P40459 309 aa8.12□□□□□ -1.11
LSP1YPL004C SIP4P46954 829 aa8.12□□□□□ -1.11
LSP1YPL004C GLG2P47011 380 aa8.12□□□□□ -1.11
LSP1YPL004C SIW14P53965 281 aa8.12□□□□□ -1.11
LSP1YPL004C RSC4Q02206 625 aa8.12□□□□□ -1.11
LSP1YPL004C MFB1Q04922 465 aa8.12□□□□□ -1.11
LSP1YPL004C YPR114WQ06107 315 aa8.12□□□□□ -1.11
LSP1YPL004C ACM1Q08981 209 aa8.12□□□□□ -1.11
LSP1YPL004C HOS1Q12214 470 aa8.12□□□□□ -1.11
LSP1YPL004C SFI1Q12369 946 aa8.12□□□□□ -1.11
LSP1YPL004C IRA2P19158 3079 aa8.11□□□□□ -1.11
LSP1YPL004C ERR1P0CX10 437 aa8.11□□□□□ -1.11
LSP1YPL004C ERR2P0CX11 437 aa8.11□□□□□ -1.11
LSP1YPL004C MGT1P26188 188 aa8.11□□□□□ -1.11
LSP1YPL004C CCR4P31384 837 aaKnown RBP8.11□□□□□ -1.11
LSP1YPL004C HEM12P32347 362 aaPredicted RBP8.11□□□□□ -1.11
LSP1YPL004C RRP1P35178 278 aaPredicted RBP8.11□□□□□ -1.11
LSP1YPL004C KES1P35844 434 aaKnown RBP8.11□□□□□ -1.11
LSP1YPL004C TCD2P36101 447 aaKnown RBP8.11□□□□□ -1.11
LSP1YPL004C PPX1P38698 397 aa8.11□□□□□ -1.11
LSP1YPL004C SCC4P40090 624 aa8.11□□□□□ -1.11
LSP1YPL004C RPL34BP40525 121 aaKnown RBP8.11□□□□□ -1.11
LSP1YPL004C ERR3P42222 437 aa8.11□□□□□ -1.11
LSP1YPL004C YJR124CP47159 448 aa8.11□□□□□ -1.11
LSP1YPL004C RTA1P53047 317 aa8.11□□□□□ -1.11
LSP1YPL004C MNT2P53059 558 aa8.11□□□□□ -1.11
LSP1YPL004C TIM13P53299 105 aa8.11□□□□□ -1.11
LSP1YPL004C SMA1Q02651 245 aa8.11□□□□□ -1.11
LSP1YPL004C JIP5Q06214 492 aaPredicted RBP8.11□□□□□ -1.11
LSP1YPL004C MPC54Q08550 464 aa8.11□□□□□ -1.11
LSP1YPL004C YOR338WQ99326 363 aa8.11□□□□□ -1.11
LSP1YPL004C LEU1P07264 779 aaKnown RBP8.1□□□□□ -1.11
LSP1YPL004C CBF1P17106 351 aa8.1□□□□□ -1.11
LSP1YPL004C CLN1P20437 546 aa8.1□□□□□ -1.11
LSP1YPL004C OLA1P38219 394 aaKnown RBP8.1□□□□□ -1.11
LSP1YPL004C SMF2P38778 549 aa8.1□□□□□ -1.11
LSP1YPL004C YJR061WP40355 935 aa8.1□□□□□ -1.11
LSP1YPL004C DPH1P40487 425 aaKnown RBP8.1□□□□□ -1.11
LSP1YPL004C SER33P40510 469 aa8.1□□□□□ -1.11
LSP1YPL004C YNL320WP42840 284 aa8.1□□□□□ -1.11
LSP1YPL004C SAE2P46946 345 aa8.1□□□□□ -1.11
LSP1YPL004C TAH11P47112 604 aa8.1□□□□□ -1.11
LSP1YPL004C EMC4P53073 190 aa8.1□□□□□ -1.11
LSP1YPL004C YGL140CP53120 1219 aa8.1□□□□□ -1.11
LSP1YPL004C REG1Q00816 1014 aa8.1□□□□□ -1.11
LSP1YPL004C YMR160WQ03823 816 aa8.1□□□□□ -1.11
LSP1YPL004C NOP6Q07623 225 aaKnown RBP8.1□□□□□ -1.11
LSP1YPL004C NUR1Q12066 484 aa8.1□□□□□ -1.11
LSP1YPL004C SPO16P17122 198 aa8.09□□□□□ -1.11
LSP1YPL004C PMA2P19657 947 aa8.09□□□□□ -1.11
LSP1YPL004C GID7P25569 745 aa8.09□□□□□ -1.11
LSP1YPL004C AEP1P32493 518 aa8.09□□□□□ -1.11
LSP1YPL004C PMT1P33775 817 aa8.09□□□□□ -1.11
LSP1YPL004C SCD5P34758 872 aa8.09□□□□□ -1.11
LSP1YPL004C TFA2P36145 328 aa8.09□□□□□ -1.11
LSP1YPL004C YHR078WP38799 552 aa8.09□□□□□ -1.11
LSP1YPL004C GIP4P39732 760 aa8.09□□□□□ -1.11
LSP1YPL004C CEP3P40969 608 aa8.09□□□□□ -1.11
LSP1YPL004C REF2P42073 533 aaPredicted RBP8.09□□□□□ -1.11
LSP1YPL004C SET2P46995 733 aaKnown RBP8.09□□□□□ -1.11
LSP1YPL004C COG1P53079 417 aa8.09□□□□□ -1.11
LSP1YPL004C SPC105P53148 917 aa8.09□□□□□ -1.11
LSP1YPL004C NPY1P53164 384 aa8.09□□□□□ -1.11
LSP1YPL004C YMR178WQ03219 274 aaKnown RBP8.09□□□□□ -1.11
LSP1YPL004C YDR131CQ03899 556 aa8.09□□□□□ -1.11
LSP1YPL004C PPN1Q04119 674 aa8.09□□□□□ -1.11
LSP1YPL004C ATG23Q06671 453 aa8.09□□□□□ -1.11
LSP1YPL004C CDC8P00572 216 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms