RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	PEX11	Q12462	236 aa		11.79	□□□□□ -0.52
DED1	YOR204W	ENO1	P00924	437 aa	Known RBP	11.79	□□□□□ -0.52
DED1	YOR204W	MRPL8	P22353	238 aa		11.79	□□□□□ -0.52
DED1	YOR204W	MRPL25	P23369	157 aa		11.79	□□□□□ -0.52
DED1	YOR204W	GEX1	P25596	615 aa		11.79	□□□□□ -0.52
DED1	YOR204W	NDI1	P32340	513 aa		11.79	□□□□□ -0.52
DED1	YOR204W	GDA1	P32621	518 aa		11.79	□□□□□ -0.52
DED1	YOR204W	ALY1	P36117	915 aa		11.79	□□□□□ -0.52
DED1	YOR204W	TGL4	P36165	910 aa		11.79	□□□□□ -0.52
DED1	YOR204W	GEX2	P36173	615 aa		11.79	□□□□□ -0.52
DED1	YOR204W	MRPL40	P36534	297 aa		11.79	□□□□□ -0.52
DED1	YOR204W	MEF2	P39677	819 aa		11.79	□□□□□ -0.52
DED1	YOR204W	DOT6	P40059	670 aa	Known RBP	11.79	□□□□□ -0.52
DED1	YOR204W	CHS6	P40955	746 aa		11.79	□□□□□ -0.52
DED1	YOR204W	RLI1	Q03195	608 aa	Known RBP	11.79	□□□□□ -0.52
DED1	YOR204W	HOS1	Q12214	470 aa		11.79	□□□□□ -0.52
DED1	YOR204W	RPS14A	P06367	137 aa	Known RBP	11.78	□□□□□ -0.52
DED1	YOR204W	IMG2	P25642	146 aa	Predicted RBP	11.78	□□□□□ -0.52
DED1	YOR204W	ETR1	P38071	380 aa		11.78	□□□□□ -0.52
DED1	YOR204W	RPS14B	P39516	138 aa	Known RBP	11.78	□□□□□ -0.52
DED1	YOR204W	EXO1	P39875	702 aa		11.78	□□□□□ -0.52
DED1	YOR204W	PAN6	P40459	309 aa		11.78	□□□□□ -0.52
DED1	YOR204W	STR3	P53101	465 aa	Known RBP	11.78	□□□□□ -0.52
DED1	YOR204W	SFB2	P53953	876 aa		11.78	□□□□□ -0.52
DED1	YOR204W	KTR5	P53966	522 aa	Predicted RBP	11.78	□□□□□ -0.52
DED1	YOR204W	CDC14	Q00684	551 aa		11.78	□□□□□ -0.52
DED1	YOR204W	CLN1	P20437	546 aa		11.77	□□□□□ -0.52
DED1	YOR204W	RBK1	P25332	333 aa		11.77	□□□□□ -0.52
DED1	YOR204W	RPL34A	P87262	121 aa	Predicted RBP	11.77	□□□□□ -0.52
DED1	YOR204W	CMS1	Q07897	291 aa	Known RBP	11.77	□□□□□ -0.52
DED1	YOR204W	SST2	P11972	698 aa	Known RBP	11.76	□□□□□ -0.53
DED1	YOR204W	HEM12	P32347	362 aa	Predicted RBP	11.76	□□□□□ -0.53
DED1	YOR204W	SMI1	P32566	505 aa		11.76	□□□□□ -0.53
DED1	YOR204W	SPC97	P38863	823 aa		11.76	□□□□□ -0.53
DED1	YOR204W	DUN1	P39009	513 aa		11.76	□□□□□ -0.53
DED1	YOR204W	RMD8	P43620	662 aa		11.76	□□□□□ -0.53
DED1	YOR204W	HST2	P53686	357 aa		11.76	□□□□□ -0.53
DED1	YOR204W	MET14	Q02196	202 aa		11.76	□□□□□ -0.53
DED1	YOR204W	UTP13	Q05946	817 aa	Known RBP	11.76	□□□□□ -0.53
DED1	YOR204W	SSC1	P0CS90	654 aa	Known RBP	11.76	□□□□□ -0.53
DED1	YOR204W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
DED1	YOR204W	DAL81	P21657	970 aa		11.76	□□□□□ -0.53
DED1	YOR204W	MIH1	P23748	554 aa		11.76	□□□□□ -0.53
DED1	YOR204W	REF2	P42073	533 aa	Predicted RBP	11.76	□□□□□ -0.53
DED1	YOR204W	CCT8	P47079	568 aa	Known RBP	11.76	□□□□□ -0.53
DED1	YOR204W	NUP100	Q02629	959 aa		11.76	□□□□□ -0.53
DED1	YOR204W	RNY1	Q02933	434 aa	Known RBP	11.76	□□□□□ -0.53
DED1	YOR204W	TRS31	Q03337	283 aa		11.76	□□□□□ -0.53
DED1	YOR204W	YSH1	Q06224	779 aa	Predicted RBP	11.76	□□□□□ -0.53
DED1	YOR204W	LDB18	Q07887	179 aa		11.76	□□□□□ -0.53
DED1	YOR204W	RSB1	Q08417	382 aa		11.76	□□□□□ -0.53
DED1	YOR204W	YLR149C	Q99296	730 aa		11.76	□□□□□ -0.53
DED1	YOR204W	CIN4	P39110	191 aa		11.75	□□□□□ -0.53
DED1	YOR204W	IST3	P40565	148 aa	Predicted RBP	11.75	□□□□□ -0.53
DED1	YOR204W	TES1	P41903	349 aa	Known RBP	11.75	□□□□□ -0.53
DED1	YOR204W	SAP4	P53036	818 aa		11.75	□□□□□ -0.53
DED1	YOR204W	AIM14	P53109	570 aa		11.75	□□□□□ -0.53
DED1	YOR204W	PER33	Q12144	273 aa		11.75	□□□□□ -0.53
DED1	YOR204W	UBR1	P19812	1950 aa		11.75	□□□□□ -0.53
DED1	YOR204W	PUP3	P25451	205 aa	Known RBP	11.74	□□□□□ -0.53
DED1	YOR204W	AIM23	P47015	356 aa		11.74	□□□□□ -0.53
DED1	YOR204W	CSN12	P47130	423 aa		11.74	□□□□□ -0.53
DED1	YOR204W	EMC4	P53073	190 aa		11.74	□□□□□ -0.53
DED1	YOR204W	BIO4	P53630	237 aa		11.74	□□□□□ -0.53
DED1	YOR204W	VAC7	P53950	1165 aa		11.74	□□□□□ -0.53
DED1	YOR204W	OMS1	Q06668	471 aa		11.74	□□□□□ -0.53
DED1	YOR204W	INO1	P11986	533 aa		11.74	□□□□□ -0.53
DED1	YOR204W	AMS1	P22855	1083 aa		11.74	□□□□□ -0.53
DED1	YOR204W	SEC14	P24280	304 aa	Known RBP	11.74	□□□□□ -0.53
DED1	YOR204W	DCC1	P25559	380 aa		11.74	□□□□□ -0.53
DED1	YOR204W	TFA2	P36145	328 aa		11.74	□□□□□ -0.53
DED1	YOR204W	YHL041W	P38730	149 aa		11.74	□□□□□ -0.53
DED1	YOR204W	SEO1	P39709	593 aa		11.74	□□□□□ -0.53
DED1	YOR204W	YNR065C	P53751	1116 aa		11.74	□□□□□ -0.53
DED1	YOR204W	NHX1	Q04121	633 aa		11.74	□□□□□ -0.53
DED1	YOR204W	HIS5	P07172	385 aa		11.73	□□□□□ -0.53
DED1	YOR204W	LEU1	P07264	779 aa	Known RBP	11.73	□□□□□ -0.53
DED1	YOR204W	GPA2	P10823	449 aa		11.73	□□□□□ -0.53
DED1	YOR204W	SCH9	P11792	824 aa	Known RBP	11.73	□□□□□ -0.53
DED1	YOR204W	PEX5	P35056	612 aa		11.73	□□□□□ -0.53
DED1	YOR204W	YHI9	P38765	294 aa		11.73	□□□□□ -0.53
DED1	YOR204W	BUD13	P46947	266 aa	Predicted RBP	11.73	□□□□□ -0.53
DED1	YOR204W	RNT1	Q02555	471 aa		11.73	□□□□□ -0.53
DED1	YOR204W	SEC63	P14906	663 aa		11.72	□□□□□ -0.53
DED1	YOR204W	SRV2	P17555	526 aa	Known RBP	11.72	□□□□□ -0.53
DED1	YOR204W	YCR051W	P25631	222 aa		11.72	□□□□□ -0.53
DED1	YOR204W	BEM1	P29366	551 aa		11.72	□□□□□ -0.53
DED1	YOR204W	SLT2	Q00772	484 aa		11.72	□□□□□ -0.53
DED1	YOR204W	RSC4	Q02206	625 aa		11.72	□□□□□ -0.53
DED1	YOR204W	TDA5	Q06417	326 aa	Known RBP	11.72	□□□□□ -0.53
DED1	YOR204W	RAD59	Q12223	238 aa		11.72	□□□□□ -0.53
DED1	YOR204W	SLP1	Q12232	587 aa		11.72	□□□□□ -0.53
DED1	YOR204W	FAB1	P34756	2278 aa		11.72	□□□□□ -0.53
DED1	YOR204W	HSP60	P19882	572 aa	Known RBP	11.72	□□□□□ -0.53
DED1	YOR204W	MRM1	P25270	412 aa		11.72	□□□□□ -0.53
DED1	YOR204W	AEP1	P32493	518 aa		11.72	□□□□□ -0.53
DED1	YOR204W	SCD5	P34758	872 aa		11.72	□□□□□ -0.53
DED1	YOR204W	YTP1	P53584	459 aa		11.72	□□□□□ -0.53
DED1	YOR204W	YDR132C	Q03900	495 aa		11.72	□□□□□ -0.53
DED1	YOR204W	FAR8	Q05040	523 aa		11.72	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 75 ms