RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C YAL037WP39728 267 aa8.72□□□□□ -1.01
PUP1YOR157C RRN7P40992 514 aa8.72□□□□□ -1.01
PUP1YOR157C NRD1P53617 575 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01 RIP-Chip
PUP1YOR157C DIC1Q06143 298 aa8.72□□□□□ -1.01
PUP1YOR157C VPS68Q12016 184 aa8.72□□□□□ -1.01
PUP1YOR157C CWC2Q12046 339 aaPredicted RBP8.72□□□□□ -1.01
PUP1YOR157C CLC1P17891 233 aa8.71□□□□□ -1.02
PUP1YOR157C GAL11P19659 1081 aa8.71□□□□□ -1.02
PUP1YOR157C MSH3P25336 1018 aa8.71□□□□□ -1.02
PUP1YOR157C SPT16P32558 1035 aaKnown RBP8.71□□□□□ -1.02
PUP1YOR157C SEF1P34228 1148 aa8.71□□□□□ -1.02
PUP1YOR157C CSN12P47130 423 aa8.71□□□□□ -1.02
PUP1YOR157C MSH6Q03834 1242 aa8.71□□□□□ -1.02
PUP1YOR157C CMS1Q07897 291 aaKnown RBP8.71□□□□□ -1.02
PUP1YOR157C YDR262WQ12331 272 aa8.71□□□□□ -1.02
PUP1YOR157C OCA6Q12454 224 aa8.71□□□□□ -1.02
PUP1YOR157C DDP1Q99321 188 aaKnown RBP8.71□□□□□ -1.02
PUP1YOR157C RPC31P17890 251 aa8.7□□□□□ -1.02
PUP1YOR157C SCL1P21243 252 aaKnown RBP8.7□□□□□ -1.02
PUP1YOR157C MSB1P21339 1137 aaKnown RBP8.7□□□□□ -1.02
PUP1YOR157C AAT2P23542 418 aaKnown RBP8.7□□□□□ -1.02
PUP1YOR157C YCR006CP25350 157 aa8.7□□□□□ -1.02
PUP1YOR157C SPC110P32380 944 aa8.7□□□□□ -1.02
PUP1YOR157C ARA1P38115 344 aa8.7□□□□□ -1.02
PUP1YOR157C TDA3P38758 523 aa8.7□□□□□ -1.02
PUP1YOR157C RRT5P43607 289 aa8.7□□□□□ -1.02
PUP1YOR157C PCL10P53124 433 aa8.7□□□□□ -1.02
PUP1YOR157C TIM13P53299 105 aa8.7□□□□□ -1.02
PUP1YOR157C SIZ1Q04195 904 aa8.7□□□□□ -1.02
PUP1YOR157C YDL073WQ07454 984 aa8.7□□□□□ -1.02
PUP1YOR157C YOL024WQ08172 172 aa8.7□□□□□ -1.02
PUP1YOR157C YOR338WQ99326 363 aa8.7□□□□□ -1.02
PUP1YOR157C YPK1P12688 680 aaKnown RBP8.69□□□□□ -1.02
PUP1YOR157C MVD1P32377 396 aaKnown RBP8.69□□□□□ -1.02
PUP1YOR157C YET1P35723 206 aa8.69□□□□□ -1.02
PUP1YOR157C MGS1P40151 587 aa8.69□□□□□ -1.02
PUP1YOR157C SIP4P46954 829 aa8.69□□□□□ -1.02
PUP1YOR157C TY4A-JP47023 414 aa8.69□□□□□ -1.02
PUP1YOR157C IKS1P47042 667 aa8.69□□□□□ -1.02
PUP1YOR157C YNL143CP53908 130 aa8.69□□□□□ -1.02
PUP1YOR157C PLB3Q08108 686 aa8.69□□□□□ -1.02
PUP1YOR157C TUB3P09734 445 aaKnown RBP8.68□□□□□ -1.02
PUP1YOR157C MSR1P38714 643 aa8.68□□□□□ -1.02
PUP1YOR157C CCT6P39079 546 aa8.68□□□□□ -1.02
PUP1YOR157C TIM17P39515 158 aa8.68□□□□□ -1.02
PUP1YOR157C EMI1Q04406 187 aa8.68□□□□□ -1.02
PUP1YOR157C YDR222WQ04925 415 aa8.68□□□□□ -1.02
PUP1YOR157C GYP1Q08484 637 aa8.68□□□□□ -1.02
PUP1YOR157C TMS1Q12116 473 aa8.68□□□□□ -1.02
PUP1YOR157C GPM3Q12326 303 aa8.68□□□□□ -1.02
PUP1YOR157C UBA1P22515 1024 aaKnown RBP8.67□□□□□ -1.02
PUP1YOR157C RFA2P26754 273 aaKnown RBP8.67□□□□□ -1.02
PUP1YOR157C HXT3P32466 567 aaKnown RBP8.67□□□□□ -1.02
PUP1YOR157C TAF14P35189 244 aa8.67□□□□□ -1.02
PUP1YOR157C TMN3P40071 706 aa8.67□□□□□ -1.02
PUP1YOR157C ATM1P40416 690 aa8.67□□□□□ -1.02
PUP1YOR157C MKT1P40850 830 aaKnown RBP8.67□□□□□ -1.02
PUP1YOR157C ROM1P53046 1155 aa8.67□□□□□ -1.02
PUP1YOR157C TAD1P53065 400 aa8.67□□□□□ -1.02
PUP1YOR157C SXM1Q04175 944 aaKnown RBP8.67□□□□□ -1.02
PUP1YOR157C CIR2Q08822 631 aa8.67□□□□□ -1.02
PUP1YOR157C PGC1Q08959 321 aa8.67□□□□□ -1.02
PUP1YOR157C COX5AP00424 153 aa8.66□□□□□ -1.02
PUP1YOR157C MRS6P32864 603 aaKnown RBP8.66□□□□□ -1.02
PUP1YOR157C ADE17P38009 592 aaKnown RBP8.66□□□□□ -1.02
PUP1YOR157C SWC5P38326 303 aa8.66□□□□□ -1.02
PUP1YOR157C YHL008CP38750 627 aa8.66□□□□□ -1.02
PUP1YOR157C YJL132WP47014 750 aa8.66□□□□□ -1.02
PUP1YOR157C BIR1P47134 954 aa8.66□□□□□ -1.02
PUP1YOR157C TCB2P48231 1178 aa8.66□□□□□ -1.02
PUP1YOR157C YMR160WQ03823 816 aa8.66□□□□□ -1.02
PUP1YOR157C PFA4Q12006 378 aa8.66□□□□□ -1.02
PUP1YOR157C STT4P37297 1900 aa8.66□□□□□ -1.02
PUP1YOR157C TRX1P22217 103 aaKnown RBP8.65□□□□□ -1.02
PUP1YOR157C IML3P38265 245 aa8.65□□□□□ -1.02
PUP1YOR157C YBR259WP38338 688 aa8.65□□□□□ -1.02
PUP1YOR157C BIT2P38346 545 aa8.65□□□□□ -1.02
PUP1YOR157C DED81P38707 554 aaKnown RBP8.65□□□□□ -1.02
PUP1YOR157C YHL041WP38730 149 aa8.65□□□□□ -1.02
PUP1YOR157C CCT5P40413 562 aaKnown RBP8.65□□□□□ -1.02
PUP1YOR157C SSU1P41930 458 aa8.65□□□□□ -1.02
PUP1YOR157C YGL108CP53139 140 aa8.65□□□□□ -1.02
PUP1YOR157C YGR127WP53275 312 aa8.65□□□□□ -1.02
PUP1YOR157C CDC55Q00362 526 aa8.65□□□□□ -1.02
PUP1YOR157C GFD1Q04839 188 aaKnown RBP8.65□□□□□ -1.02
PUP1YOR157C VID22Q05934 901 aa8.65□□□□□ -1.02
PUP1YOR157C YPR078CQ06813 372 aa8.65□□□□□ -1.02
PUP1YOR157C RRP6Q12149 733 aaKnown RBP8.65□□□□□ -1.02
PUP1YOR157C EFG1Q3E705 233 aaKnown RBP8.65□□□□□ -1.02
PUP1YOR157C AI4P03878 556 aa8.64□□□□□ -1.03
PUP1YOR157C TUP1P16649 713 aa8.64□□□□□ -1.03
PUP1YOR157C EPT1P22140 391 aa8.64□□□□□ -1.03
PUP1YOR157C PET309P32522 965 aaPredicted RBP8.64□□□□□ -1.03
PUP1YOR157C CDC13P32797 924 aaKnown RBP8.64□□□□□ -1.03
PUP1YOR157C SQT1P35184 431 aa8.64□□□□□ -1.03
PUP1YOR157C MIP6P38760 659 aaKnown RBP8.64□□□□□ -1.03
PUP1YOR157C MNN11P46985 422 aaKnown RBP8.64□□□□□ -1.03
PUP1YOR157C YMR1P47147 688 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
PUP1YOR157C FRE4P53746 719 aa8.64□□□□□ -1.03
PUP1YOR157C TGL2P54857 326 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms