RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W ZRT2Q12436 422 aa6.78□□□□□ -1.32
LSC1YOR142W PAT1P25644 796 aaKnown RBP6.77□□□□□ -1.33
LSC1YOR142W IRS4P36115 615 aaKnown RBP6.77□□□□□ -1.33
LSC1YOR142W CKB2P38930 258 aa6.77□□□□□ -1.33
LSC1YOR142W RAD26P40352 1085 aa6.77□□□□□ -1.33
LSC1YOR142W NDC80P40460 691 aa6.77□□□□□ -1.33
LSC1YOR142W NMD5P46970 1048 aa6.77□□□□□ -1.33
LSC1YOR142W DAN4P47179 1161 aa6.77□□□□□ -1.33
LSC1YOR142W NUP84P52891 726 aa6.77□□□□□ -1.33
LSC1YOR142W MNT2P53059 558 aa6.77□□□□□ -1.33
LSC1YOR142W STR3P53101 465 aaKnown RBP6.77□□□□□ -1.33
LSC1YOR142W YTP1P53584 459 aa6.77□□□□□ -1.33
LSC1YOR142W IPI3P53877 555 aa6.77□□□□□ -1.33
LSC1YOR142W TEP1P53916 434 aa6.77□□□□□ -1.33
LSC1YOR142W ORC3P54790 616 aa6.77□□□□□ -1.33
LSC1YOR142W AAD15Q08361 143 aa6.77□□□□□ -1.33
LSC1YOR142W BMT6Q12291 365 aa6.77□□□□□ -1.33
LSC1YOR142W ACC1Q00955 2233 aaKnown RBP6.77□□□□□ -1.33
LSC1YOR142W MPH2P0CD99 609 aa6.76□□□□□ -1.33
LSC1YOR142W CDC24P11433 854 aaPredicted RBP6.76□□□□□ -1.33
LSC1YOR142W SCH9P11792 824 aaKnown RBP6.76□□□□□ -1.33
LSC1YOR142W ACO1P19414 778 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
LSC1YOR142W RBK1P25332 333 aa6.76□□□□□ -1.33
LSC1YOR142W PMI40P29952 429 aaKnown RBP6.76□□□□□ -1.33
LSC1YOR142W CCR4P31384 837 aaKnown RBP6.76□□□□□ -1.33
LSC1YOR142W GCG1P32656 232 aaKnown RBP6.76□□□□□ -1.33
LSC1YOR142W LIP5P32875 414 aa6.76□□□□□ -1.33
LSC1YOR142W CSE1P33307 960 aa6.76□□□□□ -1.33
LSC1YOR142W TGL4P36165 910 aa6.76□□□□□ -1.33
LSC1YOR142W TFG1P41895 735 aaPredicted RBP6.76□□□□□ -1.33
LSC1YOR142W GLG2P47011 380 aa6.76□□□□□ -1.33
LSC1YOR142W HLJ1P48353 224 aa6.76□□□□□ -1.33
LSC1YOR142W YGL140CP53120 1219 aa6.76□□□□□ -1.33
LSC1YOR142W YPR114WQ06107 315 aa6.76□□□□□ -1.33
LSC1YOR142W JIP5Q06214 492 aaPredicted RBP6.76□□□□□ -1.33
LSC1YOR142W ACM1Q08981 209 aa6.76□□□□□ -1.33
LSC1YOR142W AVL9Q12500 764 aa6.76□□□□□ -1.33
LSC1YOR142W CLN1P20437 546 aa6.75□□□□□ -1.33
LSC1YOR142W PMT1P33775 817 aa6.75□□□□□ -1.33
LSC1YOR142W SCD5P34758 872 aa6.75□□□□□ -1.33
LSC1YOR142W ECM2P38241 364 aaKnown RBP6.75□□□□□ -1.33
LSC1YOR142W VHC1P38329 1120 aa6.75□□□□□ -1.33
LSC1YOR142W REI1P38344 393 aaPredicted RBP6.75□□□□□ -1.33
LSC1YOR142W IST3P40565 148 aaPredicted RBP6.75□□□□□ -1.33
LSC1YOR142W RGD2P43556 714 aa6.75□□□□□ -1.33
LSC1YOR142W BUD13P46947 266 aaPredicted RBP6.75□□□□□ -1.33
LSC1YOR142W ATG36P46983 293 aa6.75□□□□□ -1.33
LSC1YOR142W COG7P53195 279 aa6.75□□□□□ -1.33
LSC1YOR142W YPR003CP53394 754 aa6.75□□□□□ -1.33
LSC1YOR142W CLU1Q03690 1277 aaKnown RBP6.75□□□□□ -1.33
LSC1YOR142W TRE2Q08693 809 aa6.75□□□□□ -1.33
LSC1YOR142W YLR149CQ99296 730 aa6.75□□□□□ -1.33
LSC1YOR142W CSF1Q12150 2958 aa6.75□□□□□ -1.33
LSC1YOR142W PMA2P19657 947 aa6.74□□□□□ -1.33
LSC1YOR142W PRP9P19736 530 aaKnown RBP6.74□□□□□ -1.33
LSC1YOR142W MNE1P24720 663 aa6.74□□□□□ -1.33
LSC1YOR142W TSR4P25040 408 aa6.74□□□□□ -1.33
LSC1YOR142W SRX1P36077 127 aa6.74□□□□□ -1.33
LSC1YOR142W YHL041WP38730 149 aa6.74□□□□□ -1.33
LSC1YOR142W YHR078WP38799 552 aa6.74□□□□□ -1.33
LSC1YOR142W BAT1P38891 393 aaKnown RBP6.74□□□□□ -1.33
LSC1YOR142W PCF11P39081 626 aaPredicted RBP6.74□□□□□ -1.33
LSC1YOR142W RPL34BP40525 121 aaKnown RBP6.74□□□□□ -1.33
LSC1YOR142W TES1P41903 349 aaKnown RBP6.74□□□□□ -1.33
LSC1YOR142W IML2P47031 731 aa6.74□□□□□ -1.33
LSC1YOR142W TAH11P47112 604 aa6.74□□□□□ -1.33
LSC1YOR142W CSN12P47130 423 aa6.74□□□□□ -1.33
LSC1YOR142W YJR124CP47159 448 aa6.74□□□□□ -1.33
LSC1YOR142W MTO1P53070 669 aa6.74□□□□□ -1.33
LSC1YOR142W SIW14P53965 281 aa6.74□□□□□ -1.33
LSC1YOR142W CDC14Q00684 551 aa6.74□□□□□ -1.33
LSC1YOR142W VTI1Q04338 217 aa6.74□□□□□ -1.33
LSC1YOR142W LDB18Q07887 179 aa6.74□□□□□ -1.33
LSC1YOR142W APL5Q08951 932 aaKnown RBP6.74□□□□□ -1.33
LSC1YOR142W SFI1Q12369 946 aa6.74□□□□□ -1.33
LSC1YOR142W RMP1Q12530 201 aa6.74□□□□□ -1.33
LSC1YOR142W NAG1Q8TGN9 163 aa6.74□□□□□ -1.33
LSC1YOR142W Q0182Q9ZZW1 134 aa6.74□□□□□ -1.33
LSC1YOR142W YML002WP0CF17 737 aa6.73□□□□□ -1.33
LSC1YOR142W IMA3P0CW40 589 aa6.73□□□□□ -1.33
LSC1YOR142W IMA4P0CW41 589 aa6.73□□□□□ -1.33
LSC1YOR142W ERR1P0CX10 437 aa6.73□□□□□ -1.33
LSC1YOR142W ERR2P0CX11 437 aa6.73□□□□□ -1.33
LSC1YOR142W DCC1P25559 380 aa6.73□□□□□ -1.33
LSC1YOR142W GID7P25569 745 aa6.73□□□□□ -1.33
LSC1YOR142W MGT1P26188 188 aa6.73□□□□□ -1.33
LSC1YOR142W BRF1P29056 596 aa6.73□□□□□ -1.33
LSC1YOR142W AEP1P32493 518 aa6.73□□□□□ -1.33
LSC1YOR142W SEC61P32915 480 aa6.73□□□□□ -1.33
LSC1YOR142W SRP101P32916 621 aa6.73□□□□□ -1.33
LSC1YOR142W POP4P38336 279 aa6.73□□□□□ -1.33
LSC1YOR142W PFS1P38872 237 aa6.73□□□□□ -1.33
LSC1YOR142W SCC4P40090 624 aa6.73□□□□□ -1.33
LSC1YOR142W YJR061WP40355 935 aa6.73□□□□□ -1.33
LSC1YOR142W MAD1P40957 749 aa6.73□□□□□ -1.33
LSC1YOR142W ERR3P42222 437 aa6.73□□□□□ -1.33
LSC1YOR142W SET2P46995 733 aaKnown RBP6.73□□□□□ -1.33
LSC1YOR142W COQ5P49017 307 aa6.73□□□□□ -1.33
LSC1YOR142W NBP35P52920 328 aa6.73□□□□□ -1.33
LSC1YOR142W COG1P53079 417 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms