RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR8, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR8	YNR028W	FUN12	P39730	1002 aa	Known RBP	4.62	□□□□□ -1.67
CPR8	YNR028W	SKP2	P42843	763 aa		4.62	□□□□□ -1.67
CPR8	YNR028W	NPA3	P47122	385 aa		4.62	□□□□□ -1.67
CPR8	YNR028W	GLO1	P50107	326 aa		4.62	□□□□□ -1.67
CPR8	YNR028W	IMA1	P53051	589 aa		4.62	□□□□□ -1.67
CPR8	YNR028W	LYS21	Q12122	440 aa	Known RBP	4.62	□□□□□ -1.67
CPR8	YNR028W	RVB2	Q12464	471 aa	Known RBP	4.62	□□□□□ -1.67
CPR8	YNR028W	ILS1	P09436	1072 aa	Known RBP	4.61	□□□□□ -1.67
CPR8	YNR028W	YMR085W	P0CF18	432 aa		4.61	□□□□□ -1.67
CPR8	YNR028W	PET122	P10355	254 aa		4.61	□□□□□ -1.67
CPR8	YNR028W	FAF1	P40546	346 aa	Predicted RBP	4.61	□□□□□ -1.67
CPR8	YNR028W	CIN1	P40987	1014 aa		4.61	□□□□□ -1.67
CPR8	YNR028W	YJR008W	P47085	338 aa		4.61	□□□□□ -1.67
CPR8	YNR028W	SUL2	Q12325	893 aa		4.61	□□□□□ -1.67
CPR8	YNR028W	GCD7	P32502	381 aa	Predicted RBP	4.6	□□□□□ -1.67
CPR8	YNR028W	PUG1	P40100	303 aa		4.6	□□□□□ -1.67
CPR8	YNR028W	SNM1	P40993	198 aa		4.6	□□□□□ -1.67
CPR8	YNR028W	UBX6	P47049	396 aa		4.6	□□□□□ -1.67
CPR8	YNR028W	TAM41	P53230	385 aa		4.6	□□□□□ -1.67
CPR8	YNR028W	YGR079W	P53249	370 aa		4.6	□□□□□ -1.67
CPR8	YNR028W	UBX4	P54730	416 aa		4.6	□□□□□ -1.67
CPR8	YNR028W	COX1	P00401	534 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	BIK1	P11709	440 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	YAP1	P19880	650 aa	Known RBP	4.59	□□□□□ -1.67
CPR8	YNR028W	CLB4	P24871	460 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	PTC6	P25646	442 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	URK1	P27515	501 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	LAC1	P28496	418 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	GSH1	P32477	678 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	FSH1	P38777	243 aa	Known RBP	4.59	□□□□□ -1.67
CPR8	YNR028W	MTG1	Q03151	367 aa	Predicted RBP	4.59	□□□□□ -1.67
CPR8	YNR028W	CRC1	Q12289	327 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	ICT1	Q12385	394 aa		4.59	□□□□□ -1.67
CPR8	YNR028W	COQ3	P27680	312 aa		4.58	□□□□□ -1.68
CPR8	YNR028W	YBR138C	P38277	524 aa		4.58	□□□□□ -1.68
CPR8	YNR028W	ACA1	P39970	489 aa		4.58	□□□□□ -1.68
CPR8	YNR028W	RPT2	P40327	437 aa	Known RBP	4.58	□□□□□ -1.68
CPR8	YNR028W	GAT1	P43574	510 aa		4.58	□□□□□ -1.68
CPR8	YNR028W	GTB1	Q04924	702 aa		4.58	□□□□□ -1.68
CPR8	YNR028W	LEA1	Q08963	238 aa	Predicted RBP	4.58	□□□□□ -1.68
CPR8	YNR028W	PGI1	P12709	554 aa	Known RBP	4.57	□□□□□ -1.68
CPR8	YNR028W	TMT1	P32643	299 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	ECM32	P32644	1121 aa	Known RBP	4.57	□□□□□ -1.68
CPR8	YNR028W	HES1	P35843	434 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	ERV46	P39727	415 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	ZAP1	P47043	880 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	SEC5	P89102	971 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	TRS130	Q03660	1102 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	YDR109C	Q04585	715 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	YAP7	Q08182	245 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	RGT2	Q12300	763 aa		4.57	□□□□□ -1.68
CPR8	YNR028W	APA1	P16550	321 aa	Known RBP	4.56	□□□□□ -1.68
CPR8	YNR028W	MSM1	P22438	575 aa		4.56	□□□□□ -1.68
CPR8	YNR028W	BUD16	P39988	312 aa		4.56	□□□□□ -1.68
CPR8	YNR028W	JHD1	P40034	492 aa		4.56	□□□□□ -1.68
CPR8	YNR028W	UBP7	P40453	1071 aa		4.56	□□□□□ -1.68
CPR8	YNR028W	YIL024C	P40543	189 aa		4.56	□□□□□ -1.68
CPR8	YNR028W	MNT3	P40549	630 aa		4.56	□□□□□ -1.68
CPR8	YNR028W	COP1	P53622	1201 aa	Known RBP	4.56	□□□□□ -1.68
CPR8	YNR028W	NCP1	P16603	691 aa	Known RBP	4.55	□□□□□ -1.68
CPR8	YNR028W	TPM2	P40414	161 aa		4.55	□□□□□ -1.68
CPR8	YNR028W	CFD1	P40558	293 aa		4.55	□□□□□ -1.68
CPR8	YNR028W	ORC5	P50874	479 aa		4.55	□□□□□ -1.68
CPR8	YNR028W	STP3	Q05937	343 aa		4.55	□□□□□ -1.68
CPR8	YNR028W	THI3	Q07471	609 aa		4.55	□□□□□ -1.68
CPR8	YNR028W	MSS51	P32335	436 aa		4.54	□□□□□ -1.68
CPR8	YNR028W	NUP120	P35729	1037 aa		4.54	□□□□□ -1.68
CPR8	YNR028W	MRPL36	P36531	177 aa		4.54	□□□□□ -1.68
CPR8	YNR028W	PSF2	P40359	213 aa		4.54	□□□□□ -1.68
CPR8	YNR028W	ERR3	P42222	437 aa		4.54	□□□□□ -1.68
CPR8	YNR028W	SUB1	P54000	292 aa	Known RBP	4.54	□□□□□ -1.68
CPR8	YNR028W	ATG23	Q06671	453 aa		4.54	□□□□□ -1.68
CPR8	YNR028W	PFA4	Q12006	378 aa		4.54	□□□□□ -1.68
CPR8	YNR028W	GET3	Q12154	354 aa	Known RBP	4.54	□□□□□ -1.68
CPR8	YNR028W	NUC1	P08466	329 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	YCL049C	P25577	312 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	RFA2	P26754	273 aa	Known RBP	4.53	□□□□□ -1.68
CPR8	YNR028W	DJP1	P40564	432 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	MSY1	P48527	492 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	YPR003C	P53394	754 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	CIA1	Q05583	330 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	BLS1	Q06071	122 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	GEP3	Q08622	556 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	BAG7	Q12128	409 aa		4.53	□□□□□ -1.68
CPR8	YNR028W	LRE1	P25579	583 aa	Known RBP	4.52	□□□□□ -1.69
CPR8	YNR028W	NPR3	P38742	1146 aa		4.52	□□□□□ -1.69
CPR8	YNR028W	FLO5	P38894	1075 aa		4.52	□□□□□ -1.69
CPR8	YNR028W	YIL161W	P40449	235 aa	Known RBP	4.52	□□□□□ -1.69
CPR8	YNR028W	ARC35	P53731	342 aa	Known RBP	4.52	□□□□□ -1.69
CPR8	YNR028W	MRPL13	Q02204	264 aa		4.52	□□□□□ -1.69
CPR8	YNR028W	VAM6	Q07468	1049 aa		4.52	□□□□□ -1.69
CPR8	YNR028W	SWT1	Q12104	458 aa		4.52	□□□□□ -1.69
CPR8	YNR028W	YPR089W	O13585	888 aa		4.51	□□□□□ -1.69
CPR8	YNR028W	ATP2	P00830	511 aa	Known RBP	4.51	□□□□□ -1.69
CPR8	YNR028W	GAL4	P04386	881 aa		4.51	□□□□□ -1.69
CPR8	YNR028W	YML003W	P0CF16	290 aa		4.51	□□□□□ -1.69
CPR8	YNR028W	DBF20	P32328	564 aa		4.51	□□□□□ -1.69
CPR8	YNR028W	PTH2	P34222	208 aa		4.51	□□□□□ -1.69
CPR8	YNR028W	ARN1	P38731	627 aa		4.51	□□□□□ -1.69
CPR8	YNR028W	SPC97	P38863	823 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 93.8 ms