RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W MGM1P32266 881 aa5.14□□□□□ -1.59
ROT1YMR200W STB6P36085 766 aa5.14□□□□□ -1.59
ROT1YMR200W UIP5P36137 443 aa5.14□□□□□ -1.59
ROT1YMR200W LAS1P36146 502 aaPredicted RBP5.14□□□□□ -1.59
ROT1YMR200W SIC1P38634 284 aa5.14□□□□□ -1.59
ROT1YMR200W YHL017WP38745 532 aa5.14□□□□□ -1.59
ROT1YMR200W SSZ1P38788 538 aaKnown RBP5.14□□□□□ -1.59
ROT1YMR200W MAD2P40958 196 aa5.14□□□□□ -1.59
ROT1YMR200W SKP2P42843 763 aa5.14□□□□□ -1.59
ROT1YMR200W STU2P46675 888 aa5.14□□□□□ -1.59
ROT1YMR200W MRX6P48564 524 aa5.14□□□□□ -1.59
ROT1YMR200W DSD1P53095 428 aa5.14□□□□□ -1.59
ROT1YMR200W ARP4P80428 489 aa5.14□□□□□ -1.59
ROT1YMR200W ERB1Q04660 807 aaKnown RBP5.14□□□□□ -1.59
ROT1YMR200W GAD1Q04792 585 aa5.14□□□□□ -1.59
ROT1YMR200W YLH47Q06493 454 aa5.14□□□□□ -1.59
ROT1YMR200W IRC13Q08630 104 aa5.14□□□□□ -1.59
ROT1YMR200W CFT2Q12102 859 aaPredicted RBP5.14□□□□□ -1.59
ROT1YMR200W GET3Q12154 354 aaKnown RBP5.14□□□□□ -1.59
ROT1YMR200W SAC3P46674 1301 aa5.14□□□□□ -1.59
ROT1YMR200W CHD1P32657 1468 aa5.13□□□□□ -1.59
ROT1YMR200W TPK1P06244 397 aa5.13□□□□□ -1.59
ROT1YMR200W RPL19AP0CX82 189 aaKnown RBP5.13□□□□□ -1.59
ROT1YMR200W RPL19BP0CX83 189 aaPredicted RBP5.13□□□□□ -1.59
ROT1YMR200W CDC24P11433 854 aaPredicted RBP5.13□□□□□ -1.59
ROT1YMR200W OCA4P25366 362 aa5.13□□□□□ -1.59
ROT1YMR200W POT1P27796 417 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
ROT1YMR200W BEM4P39011 633 aa5.13□□□□□ -1.59
ROT1YMR200W SSU1P41930 458 aa5.13□□□□□ -1.59
ROT1YMR200W CCT7P42943 550 aaKnown RBP5.13□□□□□ -1.59
ROT1YMR200W ENP2P48234 707 aaKnown RBP5.13□□□□□ -1.59
ROT1YMR200W BNI5P53890 448 aaKnown RBP5.13□□□□□ -1.59
ROT1YMR200W ALF1P53904 254 aa5.13□□□□□ -1.59
ROT1YMR200W EOS1P53938 366 aa5.13□□□□□ -1.59
ROT1YMR200W YSA1Q01976 231 aa5.13□□□□□ -1.59
ROT1YMR200W YMR210WQ03649 449 aa5.13□□□□□ -1.59
ROT1YMR200W RSF1Q05043 376 aa5.13□□□□□ -1.59
ROT1YMR200W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
ROT1YMR200W MLH2Q07980 695 aa5.13□□□□□ -1.59
ROT1YMR200W CIR2Q08822 631 aa5.13□□□□□ -1.59
ROT1YMR200W CTI6Q08923 506 aa5.13□□□□□ -1.59
ROT1YMR200W NBP2Q12163 236 aa5.13□□□□□ -1.59
ROT1YMR200W COX17Q12287 69 aa5.13□□□□□ -1.59
ROT1YMR200W YLR302CO13544 120 aa5.12□□□□□ -1.59
ROT1YMR200W POL4P25615 582 aa5.12□□□□□ -1.59
ROT1YMR200W MF(ALPHA)2P32435 120 aa5.12□□□□□ -1.59
ROT1YMR200W PPQ1P32945 549 aa5.12□□□□□ -1.59
ROT1YMR200W GND1P38720 489 aaKnown RBP5.12□□□□□ -1.59
ROT1YMR200W ZIM17P42844 174 aa5.12□□□□□ -1.59
ROT1YMR200W ARC1P46672 376 aaKnown RBP5.12□□□□□ -1.59
ROT1YMR200W SIP4P46954 829 aa5.12□□□□□ -1.59
ROT1YMR200W AMA1P50082 593 aa5.12□□□□□ -1.59
ROT1YMR200W MNT2P53059 558 aa5.12□□□□□ -1.59
ROT1YMR200W SHE10P53075 577 aa5.12□□□□□ -1.59
ROT1YMR200W MNP1P53163 194 aaPredicted RBP5.12□□□□□ -1.59
ROT1YMR200W BRE5P53741 515 aaKnown RBP5.12□□□□□ -1.59
ROT1YMR200W JJJ1P53863 590 aa5.12□□□□□ -1.59
ROT1YMR200W HBT1Q07653 1046 aaKnown RBP5.12□□□□□ -1.59
ROT1YMR200W DIN7Q12086 430 aa5.12□□□□□ -1.59
ROT1YMR200W PCK1P10963 549 aa5.11□□□□□ -1.59
ROT1YMR200W APE1P14904 514 aa5.11□□□□□ -1.59
ROT1YMR200W CLB1P24868 471 aa5.11□□□□□ -1.59
ROT1YMR200W DAL80P26343 269 aa5.11□□□□□ -1.59
ROT1YMR200W YIR042CP40586 236 aa5.11□□□□□ -1.59
ROT1YMR200W THI6P41835 540 aa5.11□□□□□ -1.59
ROT1YMR200W YNR071CP53757 342 aa5.11□□□□□ -1.59
ROT1YMR200W RCN2Q12044 265 aa5.11□□□□□ -1.59
ROT1YMR200W MRH1Q12117 320 aaPredicted RBP5.11□□□□□ -1.59
ROT1YMR200W YOL159C-AQ3E769 90 aa5.11□□□□□ -1.59
ROT1YMR200W YRF1-4O13559 1382 aa5.1□□□□□ -1.59
ROT1YMR200W LAT1P12695 482 aaKnown RBP5.1□□□□□ -1.59
ROT1YMR200W PWP1P21304 576 aaKnown RBP5.1□□□□□ -1.59
ROT1YMR200W SPB1P25582 841 aaPredicted RBP5.1□□□□□ -1.59
ROT1YMR200W IMG2P25642 146 aaPredicted RBP5.1□□□□□ -1.59
ROT1YMR200W SWC3P31376 625 aa5.1□□□□□ -1.59
ROT1YMR200W ARP2P32381 391 aaKnown RBP5.1□□□□□ -1.59
ROT1YMR200W SSE1P32589 693 aaKnown RBP5.1□□□□□ -1.59
ROT1YMR200W LOT5P34234 306 aa5.1□□□□□ -1.59
ROT1YMR200W SWH1P35845 1188 aa5.1□□□□□ -1.59
ROT1YMR200W YBL029WP38201 376 aa5.1□□□□□ -1.59
ROT1YMR200W SIF2P38262 535 aa5.1□□□□□ -1.59
ROT1YMR200W FSH1P38777 243 aaKnown RBP5.1□□□□□ -1.59
ROT1YMR200W PCL5P38794 229 aa5.1□□□□□ -1.59
ROT1YMR200W YHR131CP38835 850 aa5.1□□□□□ -1.59
ROT1YMR200W PSD1P39006 500 aa5.1□□□□□ -1.59
ROT1YMR200W ATF1P40353 525 aa5.1□□□□□ -1.59
ROT1YMR200W MTR3P48240 250 aaPredicted RBP5.1□□□□□ -1.59
ROT1YMR200W ERV25P54837 211 aaKnown RBP5.1□□□□□ -1.59
ROT1YMR200W ACS1Q01574 713 aa5.1□□□□□ -1.59
ROT1YMR200W YML122CQ03207 126 aa5.1□□□□□ -1.59
ROT1YMR200W NGL3Q03210 505 aa5.1□□□□□ -1.59
ROT1YMR200W TRI1Q05024 226 aa5.1□□□□□ -1.59
ROT1YMR200W SKG3Q06315 1026 aa5.1□□□□□ -1.59
ROT1YMR200W PHO92Q06390 306 aa5.1□□□□□ -1.59
ROT1YMR200W YPR172WQ06608 200 aa5.1□□□□□ -1.59
ROT1YMR200W AAD4Q07747 329 aa5.1□□□□□ -1.59
ROT1YMR200W ENT4Q07872 247 aa5.1□□□□□ -1.59
ROT1YMR200W SUT2Q12286 268 aa5.1□□□□□ -1.59
ROT1YMR200W GRX6Q12438 231 aa5.1□□□□□ -1.59
ROT1YMR200W CBS1P14066 229 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms