RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W SRB4P32569 687 aa7.77□□□□□ -1.17
NUP53YMR153W UTH1P36135 365 aa7.77□□□□□ -1.17
NUP53YMR153W TFA2P36145 328 aa7.77□□□□□ -1.17
NUP53YMR153W MCX1P38323 520 aaPredicted RBP7.77□□□□□ -1.17
NUP53YMR153W YJL070CP40361 888 aa7.77□□□□□ -1.17
NUP53YMR153W CSN12P47130 423 aa7.77□□□□□ -1.17
NUP53YMR153W PPN1Q04119 674 aa7.77□□□□□ -1.17
NUP53YMR153W LDB18Q07887 179 aa7.77□□□□□ -1.17
NUP53YMR153W RPN8Q08723 338 aaKnown RBP7.77□□□□□ -1.17
NUP53YMR153W FAP7Q12055 197 aaPredicted RBP7.77□□□□□ -1.17
NUP53YMR153W GNT1Q12096 491 aa7.77□□□□□ -1.17
NUP53YMR153W AI5_ALPHAQ9ZZX1 630 aa7.77□□□□□ -1.17
NUP53YMR153W POL2P21951 2222 aaKnown RBP7.76□□□□□ -1.17
NUP53YMR153W DCC1P25559 380 aa7.76□□□□□ -1.17
NUP53YMR153W ALY1P36117 915 aa7.76□□□□□ -1.17
NUP53YMR153W RRP3P38712 501 aaKnown RBP7.76□□□□□ -1.17
NUP53YMR153W MSR1P38714 643 aa7.76□□□□□ -1.17
NUP53YMR153W IST3P40565 148 aaPredicted RBP7.76□□□□□ -1.17
NUP53YMR153W SIP4P46954 829 aa7.76□□□□□ -1.17
NUP53YMR153W NBP35P52920 328 aa7.76□□□□□ -1.17
NUP53YMR153W IPI3P53877 555 aa7.76□□□□□ -1.17
NUP53YMR153W CDC14Q00684 551 aa7.76□□□□□ -1.17
NUP53YMR153W YPL113CQ02961 396 aa7.76□□□□□ -1.17
NUP53YMR153W EAF1Q06337 982 aa7.76□□□□□ -1.17
NUP53YMR153W YFT2Q06676 274 aa7.76□□□□□ -1.17
NUP53YMR153W ATG10Q07879 167 aa7.76□□□□□ -1.17
NUP53YMR153W NRT1Q08485 598 aa7.76□□□□□ -1.17
NUP53YMR153W SNF5P18480 905 aa7.75□□□□□ -1.17
NUP53YMR153W CKI1P20485 582 aa7.75□□□□□ -1.17
NUP53YMR153W BRF1P29056 596 aa7.75□□□□□ -1.17
NUP53YMR153W YKL151CP36059 337 aa7.75□□□□□ -1.17
NUP53YMR153W YBP1P38315 674 aa7.75□□□□□ -1.17
NUP53YMR153W LRP1P38801 184 aaKnown RBP7.75□□□□□ -1.17
NUP53YMR153W CAJ1P39101 391 aa7.75□□□□□ -1.17
NUP53YMR153W ELO3P40319 345 aa7.75□□□□□ -1.17
NUP53YMR153W MND2P40577 368 aa7.75□□□□□ -1.17
NUP53YMR153W NMA111P53920 997 aa7.75□□□□□ -1.17
NUP53YMR153W ARP9Q05123 467 aa7.75□□□□□ -1.17
NUP53YMR153W SUC2P00724 532 aa7.74□□□□□ -1.17
NUP53YMR153W MPH2P0CD99 609 aa7.74□□□□□ -1.17
NUP53YMR153W ERG6P25087 383 aaKnown RBP7.74□□□□□ -1.17
NUP53YMR153W SLD2P34252 453 aa7.74□□□□□ -1.17
NUP53YMR153W SCD5P34758 872 aa7.74□□□□□ -1.17
NUP53YMR153W CKB2P38930 258 aa7.74□□□□□ -1.17
NUP53YMR153W END3P39013 349 aa7.74□□□□□ -1.17
NUP53YMR153W YAT2P40017 923 aa7.74□□□□□ -1.17
NUP53YMR153W RGD2P43556 714 aa7.74□□□□□ -1.17
NUP53YMR153W HLJ1P48353 224 aa7.74□□□□□ -1.17
NUP53YMR153W APT1P49435 187 aaKnown RBP7.74□□□□□ -1.17
NUP53YMR153W TEP1P53916 434 aa7.74□□□□□ -1.17
NUP53YMR153W RPL34AP87262 121 aaPredicted RBP7.74□□□□□ -1.17
NUP53YMR153W RSC4Q02206 625 aa7.74□□□□□ -1.17
NUP53YMR153W ECM2P38241 364 aaKnown RBP7.73□□□□□ -1.17
NUP53YMR153W LTP1P40347 161 aa7.73□□□□□ -1.17
NUP53YMR153W IML2P47031 731 aa7.73□□□□□ -1.17
NUP53YMR153W STR3P53101 465 aaKnown RBP7.73□□□□□ -1.17
NUP53YMR153W YNL143CP53908 130 aa7.73□□□□□ -1.17
NUP53YMR153W SWS2P53937 143 aa7.73□□□□□ -1.17
NUP53YMR153W SIW14P53965 281 aa7.73□□□□□ -1.17
NUP53YMR153W GSF2Q04697 403 aaKnown RBP7.73□□□□□ -1.17
NUP53YMR153W VAC14Q06708 880 aa7.73□□□□□ -1.17
NUP53YMR153W TFB4Q12004 338 aa7.73□□□□□ -1.17
NUP53YMR153W CUP1-1P0CX80 61 aa7.72□□□□□ -1.17
NUP53YMR153W CUP1-2P0CX81 61 aa7.72□□□□□ -1.17
NUP53YMR153W PET123P17558 318 aa7.72□□□□□ -1.17
NUP53YMR153W UTR2P32623 467 aa7.72□□□□□ -1.17
NUP53YMR153W IRS4P36115 615 aaKnown RBP7.72□□□□□ -1.17
NUP53YMR153W YMR134WP40207 237 aa7.72□□□□□ -1.17
NUP53YMR153W DUG1P43616 481 aaKnown RBP7.72□□□□□ -1.17
NUP53YMR153W BUD13P46947 266 aaPredicted RBP7.72□□□□□ -1.17
NUP53YMR153W SWC4P53201 476 aa7.72□□□□□ -1.17
NUP53YMR153W CWC22P53333 577 aaKnown RBP7.72□□□□□ -1.17
NUP53YMR153W SLU7Q02775 382 aaKnown RBP7.72□□□□□ -1.17
NUP53YMR153W RLI1Q03195 608 aaKnown RBP7.72□□□□□ -1.17
NUP53YMR153W TRM82Q03774 444 aa7.72□□□□□ -1.17
NUP53YMR153W LDB17Q12342 491 aa7.72□□□□□ -1.17
NUP53YMR153W ZRT2Q12436 422 aa7.72□□□□□ -1.17
NUP53YMR153W YEL077CQ3E7X8 1277 aa7.72□□□□□ -1.17
NUP53YMR153W YOR338WQ99326 363 aa7.72□□□□□ -1.17
NUP53YMR153W ACO1P19414 778 aaKnown RBP RIP-Chip data7.71□□□□□ -1.17not detected
NUP53YMR153W CLN1P20437 546 aa7.71□□□□□ -1.17
NUP53YMR153W CIN8P27895 1000 aa7.71□□□□□ -1.17
NUP53YMR153W NDI1P32340 513 aa7.71□□□□□ -1.17
NUP53YMR153W AEP1P32493 518 aa7.71□□□□□ -1.17
NUP53YMR153W YBR259WP38338 688 aa7.71□□□□□ -1.17
NUP53YMR153W SRP72P38688 640 aaKnown RBP7.71□□□□□ -1.17
NUP53YMR153W SLX8P40072 274 aa7.71□□□□□ -1.17
NUP53YMR153W TES1P41903 349 aaKnown RBP7.71□□□□□ -1.17
NUP53YMR153W RPC17P47076 161 aa7.71□□□□□ -1.17
NUP53YMR153W SAP4P53036 818 aa7.71□□□□□ -1.17
NUP53YMR153W MTO1P53070 669 aa7.71□□□□□ -1.17
NUP53YMR153W GND2P53319 492 aa7.71□□□□□ -1.17
NUP53YMR153W RTT10Q08924 1013 aa7.71□□□□□ -1.17
NUP53YMR153W AIM41Q12032 185 aa7.71□□□□□ -1.17
NUP53YMR153W YKR104WP0CE69 306 aa7.7□□□□□ -1.18
NUP53YMR153W EMC1P25574 760 aa7.7□□□□□ -1.18
NUP53YMR153W MUM2P38236 366 aa7.7□□□□□ -1.18
NUP53YMR153W OCA5P38738 679 aa7.7□□□□□ -1.18
NUP53YMR153W ERV46P39727 415 aa7.7□□□□□ -1.18
NUP53YMR153W RGI2P40188 164 aa7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 89.2 ms