RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C TPO3Q06451 622 aa5.74□□□□□ -1.49
PEX12YMR026C RVB2Q12464 471 aaKnown RBP5.74□□□□□ -1.49
PEX12YMR026C CET1O13297 549 aaPredicted RBP5.73□□□□□ -1.49
PEX12YMR026C NCP1P16603 691 aaKnown RBP5.73□□□□□ -1.49
PEX12YMR026C FTH1P38310 465 aa5.73□□□□□ -1.49
PEX12YMR026C ULP2P40537 1034 aaPredicted RBP5.73□□□□□ -1.49
PEX12YMR026C TRS130Q03660 1102 aa5.73□□□□□ -1.49
PEX12YMR026C CIA1Q05583 330 aa5.73□□□□□ -1.49
PEX12YMR026C PTP1P25044 335 aa5.72□□□□□ -1.49
PEX12YMR026C GCD7P32502 381 aaPredicted RBP5.72□□□□□ -1.49
PEX12YMR026C BUD16P39988 312 aa5.72□□□□□ -1.49
PEX12YMR026C SKP2P42843 763 aa5.72□□□□□ -1.49
PEX12YMR026C SNO3P43544 222 aa5.72□□□□□ -1.49
PEX12YMR026C MTG1Q03151 367 aaPredicted RBP5.72□□□□□ -1.49
PEX12YMR026C GTB1Q04924 702 aa5.72□□□□□ -1.49
PEX12YMR026C YOR389WQ08912 624 aa5.72□□□□□ -1.49
PEX12YMR026C LYS21Q12122 440 aaKnown RBP5.72□□□□□ -1.49
PEX12YMR026C COX1P00401 534 aa5.71□□□□□ -1.5
PEX12YMR026C DBF20P32328 564 aa5.71□□□□□ -1.5
PEX12YMR026C HES1P35843 434 aa5.71□□□□□ -1.5
PEX12YMR026C FUN12P39730 1002 aaKnown RBP5.71□□□□□ -1.5
PEX12YMR026C YGR079WP53249 370 aa5.71□□□□□ -1.5
PEX12YMR026C IDP3P53982 420 aaKnown RBP5.71□□□□□ -1.5
PEX12YMR026C RSC9Q03124 581 aa5.71□□□□□ -1.5
PEX12YMR026C PRS5Q12265 496 aaKnown RBP5.71□□□□□ -1.5
PEX12YMR026C ILV2P07342 687 aaKnown RBP5.7□□□□□ -1.5
PEX12YMR026C PTH2P34222 208 aa5.7□□□□□ -1.5
PEX12YMR026C CIN1P40987 1014 aa5.7□□□□□ -1.5
PEX12YMR026C IRC7P43623 340 aa5.7□□□□□ -1.5
PEX12YMR026C NET1P47035 1189 aa5.7□□□□□ -1.5
PEX12YMR026C RTS3P53289 263 aa5.7□□□□□ -1.5
PEX12YMR026C ARC35P53731 342 aaKnown RBP5.7□□□□□ -1.5
PEX12YMR026C BLS1Q06071 122 aa5.7□□□□□ -1.5
PEX12YMR026C YCL049CP25577 312 aa5.69□□□□□ -1.5
PEX12YMR026C PTC6P25646 442 aa5.69□□□□□ -1.5
PEX12YMR026C LAC1P28496 418 aa5.69□□□□□ -1.5
PEX12YMR026C NPR3P38742 1146 aa5.69□□□□□ -1.5
PEX12YMR026C PSF2P40359 213 aa5.69□□□□□ -1.5
PEX12YMR026C PSA1P41940 361 aaKnown RBP5.69□□□□□ -1.5
PEX12YMR026C ZAP1P47043 880 aa5.69□□□□□ -1.5
PEX12YMR026C UBX6P47049 396 aa5.69□□□□□ -1.5
PEX12YMR026C ERG13P54839 491 aaKnown RBP5.69□□□□□ -1.5
PEX12YMR026C SNU56Q03782 492 aaKnown RBP5.69□□□□□ -1.5
PEX12YMR026C NUC1P08466 329 aa5.68□□□□□ -1.5
PEX12YMR026C GSH1P32477 678 aa5.68□□□□□ -1.5
PEX12YMR026C MRPL36P36531 177 aa5.68□□□□□ -1.5
PEX12YMR026C ERR3P42222 437 aa5.68□□□□□ -1.5
PEX12YMR026C MRPL13Q02204 264 aa5.68□□□□□ -1.5
PEX12YMR026C LEA1Q08963 238 aaPredicted RBP5.68□□□□□ -1.5
PEX12YMR026C ILS1P09436 1072 aaKnown RBP5.67□□□□□ -1.5
PEX12YMR026C IES5P40060 125 aa5.67□□□□□ -1.5
PEX12YMR026C UBP7P40453 1071 aa5.67□□□□□ -1.5
PEX12YMR026C ATG16Q03818 150 aa5.67□□□□□ -1.5
PEX12YMR026C YDR109CQ04585 715 aa5.67□□□□□ -1.5
PEX12YMR026C ATG23Q06671 453 aa5.67□□□□□ -1.5
PEX12YMR026C VAM6Q07468 1049 aa5.67□□□□□ -1.5
PEX12YMR026C YMR085WP0CF18 432 aa5.66□□□□□ -1.5
PEX12YMR026C MTF2P10849 440 aa5.66□□□□□ -1.5
PEX12YMR026C ERV46P39727 415 aa5.66□□□□□ -1.5
PEX12YMR026C MSY1P48527 492 aa5.66□□□□□ -1.5
PEX12YMR026C YRB30P53107 440 aaPredicted RBP5.66□□□□□ -1.5
PEX12YMR026C STP3Q05937 343 aa5.66□□□□□ -1.5
PEX12YMR026C AFT2Q08957 416 aa5.66□□□□□ -1.5
PEX12YMR026C BAG7Q12128 409 aa5.66□□□□□ -1.5
PEX12YMR026C YML003WP0CF16 290 aa5.65□□□□□ -1.5
PEX12YMR026C UBC1P21734 215 aaKnown RBP5.65□□□□□ -1.5
PEX12YMR026C VPS24P36095 224 aaKnown RBP5.65□□□□□ -1.5
PEX12YMR026C DJP1P40564 432 aa5.65□□□□□ -1.5
PEX12YMR026C SAP185P40856 1058 aa5.65□□□□□ -1.5
PEX12YMR026C STP1Q00947 519 aa5.65□□□□□ -1.5
PEX12YMR026C VMS1Q04311 632 aaKnown RBP5.65□□□□□ -1.5
PEX12YMR026C CRC1Q12289 327 aa5.65□□□□□ -1.5
PEX12YMR026C LRE1P25579 583 aaKnown RBP5.64□□□□□ -1.51
PEX12YMR026C PWP2P25635 923 aaKnown RBP5.64□□□□□ -1.51
PEX12YMR026C RFA2P26754 273 aaKnown RBP5.64□□□□□ -1.51
PEX12YMR026C NUP120P35729 1037 aa5.64□□□□□ -1.51
PEX12YMR026C GEX2P36173 615 aa5.64□□□□□ -1.51
PEX12YMR026C EXO84P38261 753 aa5.64□□□□□ -1.51
PEX12YMR026C YPR003CP53394 754 aa5.64□□□□□ -1.51
PEX12YMR026C COX17Q12287 69 aa5.64□□□□□ -1.51
PEX12YMR026C ATP2P00830 511 aaKnown RBP5.63□□□□□ -1.51
PEX12YMR026C TOP1P04786 769 aa5.63□□□□□ -1.51
PEX12YMR026C COQ3P27680 312 aa5.63□□□□□ -1.51
PEX12YMR026C MRS6P32864 603 aaKnown RBP5.63□□□□□ -1.51
PEX12YMR026C XRS2P33301 854 aa5.63□□□□□ -1.51
PEX12YMR026C SMK1P41808 388 aa5.63□□□□□ -1.51
PEX12YMR026C THI3Q07471 609 aa5.63□□□□□ -1.51
PEX12YMR026C PSR2Q07949 397 aa5.63□□□□□ -1.51
PEX12YMR026C SWT1Q12104 458 aa5.63□□□□□ -1.51
PEX12YMR026C YAP1P19880 650 aaKnown RBP5.62□□□□□ -1.51
PEX12YMR026C ECM32P32644 1121 aaKnown RBP5.62□□□□□ -1.51
PEX12YMR026C IFA38P38286 347 aa5.62□□□□□ -1.51
PEX12YMR026C YIL161WP40449 235 aaKnown RBP5.62□□□□□ -1.51
PEX12YMR026C ORC5P50874 479 aa5.62□□□□□ -1.51
PEX12YMR026C COP1P53622 1201 aaKnown RBP5.62□□□□□ -1.51
PEX12YMR026C CSL4P53859 292 aaPredicted RBP5.62□□□□□ -1.51
PEX12YMR026C ADE16P54113 591 aaKnown RBP5.62□□□□□ -1.51
PEX12YMR026C TFC6Q06339 672 aa5.62□□□□□ -1.51
PEX12YMR026C SPO16P17122 198 aa5.61□□□□□ -1.51
PEX12YMR026C YSP3P25036 478 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms