RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W YOR338WQ99326 363 aa3.97□□□□□ -1.77
USA1YML029W AI4P03878 556 aa3.96□□□□□ -1.77
USA1YML029W ADH4P10127 382 aa3.96□□□□□ -1.77
USA1YML029W MNE1P24720 663 aa3.96□□□□□ -1.77
USA1YML029W TSR4P25040 408 aa3.96□□□□□ -1.77
USA1YML029W EMC1P25574 760 aa3.96□□□□□ -1.77
USA1YML029W YCR015CP25616 317 aa3.96□□□□□ -1.77
USA1YML029W PYC2P32327 1180 aaKnown RBP3.96□□□□□ -1.77
USA1YML029W PLC1P32383 869 aa3.96□□□□□ -1.77
USA1YML029W KAR9P32526 644 aa3.96□□□□□ -1.77
USA1YML029W PPG1P32838 368 aa3.96□□□□□ -1.77
USA1YML029W SET3P36124 751 aa3.96□□□□□ -1.77
USA1YML029W SAW1P39735 261 aa3.96□□□□□ -1.77
USA1YML029W QDR1P40475 563 aa3.96□□□□□ -1.77
USA1YML029W MKT1P40850 830 aaKnown RBP3.96□□□□□ -1.77
USA1YML029W RRT5P43607 289 aa3.96□□□□□ -1.77
USA1YML029W STR3P53101 465 aaKnown RBP3.96□□□□□ -1.77
USA1YML029W YMR206WQ03695 313 aa3.96□□□□□ -1.77
USA1YML029W ACM1Q08981 209 aa3.96□□□□□ -1.77
USA1YML029W YKL068W-AQ3E826 78 aa3.96□□□□□ -1.77
USA1YML029W GCR1P07261 785 aa3.96□□□□□ -1.78
USA1YML029W FUS1P11710 512 aa3.96□□□□□ -1.78
USA1YML029W SGF29P25554 259 aa3.96□□□□□ -1.78
USA1YML029W PPZ1P26570 692 aa3.96□□□□□ -1.78
USA1YML029W PMI40P29952 429 aaKnown RBP3.96□□□□□ -1.78
USA1YML029W RIM1P32445 135 aaKnown RBP3.96□□□□□ -1.78
USA1YML029W LIP5P32875 414 aa3.96□□□□□ -1.78
USA1YML029W SRP101P32916 621 aa3.96□□□□□ -1.78
USA1YML029W ARP1P38696 384 aa3.96□□□□□ -1.78
USA1YML029W SCC4P40090 624 aa3.96□□□□□ -1.78
USA1YML029W ELO3P40319 345 aa3.96□□□□□ -1.78
USA1YML029W INA22P40576 216 aa3.96□□□□□ -1.78
USA1YML029W ALY2P47029 1046 aa3.96□□□□□ -1.78
USA1YML029W FAA4P47912 694 aaKnown RBP3.96□□□□□ -1.78
USA1YML029W ARH1P48360 493 aa3.96□□□□□ -1.78
USA1YML029W EFM6P53970 246 aa3.96□□□□□ -1.78
USA1YML029W VPS16Q03308 798 aa3.96□□□□□ -1.78
USA1YML029W ADI1Q03677 179 aa3.96□□□□□ -1.78
USA1YML029W YDR109CQ04585 715 aa3.96□□□□□ -1.78
USA1YML029W SPR28Q04921 423 aa3.96□□□□□ -1.78
USA1YML029W HPF1Q05164 967 aa3.96□□□□□ -1.78
USA1YML029W LCB5Q06147 687 aaKnown RBP3.96□□□□□ -1.78
USA1YML029W CMS1Q07897 291 aaKnown RBP3.96□□□□□ -1.78
USA1YML029W PGC1Q08959 321 aa3.96□□□□□ -1.78
USA1YML029W RAM1P22007 431 aa3.95□□□□□ -1.78
USA1YML029W HXT3P32466 567 aaKnown RBP3.95□□□□□ -1.78
USA1YML029W OTU2P38747 307 aaKnown RBP3.95□□□□□ -1.78
USA1YML029W YAT2P40017 923 aa3.95□□□□□ -1.78
USA1YML029W SEC28P40509 296 aaKnown RBP3.95□□□□□ -1.78
USA1YML029W SIP4P46954 829 aa3.95□□□□□ -1.78
USA1YML029W COQ6P53318 479 aa3.95□□□□□ -1.78
USA1YML029W CPR6P53691 371 aaKnown RBP3.95□□□□□ -1.78
USA1YML029W BET4Q00618 327 aa3.95□□□□□ -1.78
USA1YML029W CDC14Q00684 551 aa3.95□□□□□ -1.78
USA1YML029W RNT1Q02555 471 aa3.95□□□□□ -1.78
USA1YML029W SHR3Q02774 210 aa3.95□□□□□ -1.78
USA1YML029W TGL5Q12043 749 aa3.95□□□□□ -1.78
USA1YML029W PAB1P04147 577 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
USA1YML029W CDC24P11433 854 aaPredicted RBP3.95□□□□□ -1.78
USA1YML029W HOM2P13663 365 aaKnown RBP3.95□□□□□ -1.78
USA1YML029W CBF1P17106 351 aa3.95□□□□□ -1.78
USA1YML029W DAL81P21657 970 aa3.95□□□□□ -1.78
USA1YML029W MRPL8P22353 238 aa3.95□□□□□ -1.78
USA1YML029W PHO87P25360 923 aa3.95□□□□□ -1.78
USA1YML029W MET22P32179 357 aa3.95□□□□□ -1.78
USA1YML029W PXA2P34230 853 aa3.95□□□□□ -1.78
USA1YML029W DCW1P36091 449 aa3.95□□□□□ -1.78
USA1YML029W STL1P39932 569 aa3.95□□□□□ -1.78
USA1YML029W ROK1P45818 564 aaPredicted RBP3.95□□□□□ -1.78
USA1YML029W MTO1P53070 669 aa3.95□□□□□ -1.78
USA1YML029W TAN1P53072 289 aaPredicted RBP3.95□□□□□ -1.78
USA1YML029W YNR061CP53747 219 aa3.95□□□□□ -1.78
USA1YML029W TDA7P53882 636 aaPredicted RBP3.95□□□□□ -1.78
USA1YML029W ARA2Q04212 335 aa3.95□□□□□ -1.78
USA1YML029W STE23Q06010 1027 aa3.95□□□□□ -1.78
USA1YML029W ERF2Q06551 359 aa3.95□□□□□ -1.78
USA1YML029W SWC7Q06707 132 aa3.95□□□□□ -1.78
USA1YML029W GTT2Q12390 233 aa3.95□□□□□ -1.78
USA1YML029W RAD1P06777 1100 aa3.94□□□□□ -1.78
USA1YML029W KAR4P25583 335 aa3.94□□□□□ -1.78
USA1YML029W MSH2P25847 964 aa3.94□□□□□ -1.78
USA1YML029W ECM32P32644 1121 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W CTF13P35203 478 aa3.94□□□□□ -1.78
USA1YML029W PPE1P38796 400 aa3.94□□□□□ -1.78
USA1YML029W REV7P38927 245 aa3.94□□□□□ -1.78
USA1YML029W STN1P38960 494 aa3.94□□□□□ -1.78
USA1YML029W MEP1P40260 492 aa3.94□□□□□ -1.78
USA1YML029W RMD8P43620 662 aa3.94□□□□□ -1.78
USA1YML029W RPS10BP46784 105 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W PET130P47065 347 aa3.94□□□□□ -1.78
USA1YML029W AIM14P53109 570 aa3.94□□□□□ -1.78
USA1YML029W YNR065CP53751 1116 aa3.94□□□□□ -1.78
USA1YML029W PRM1P53835 661 aa3.94□□□□□ -1.78
USA1YML029W COG6P53959 839 aa3.94□□□□□ -1.78
USA1YML029W INA17Q02888 182 aa3.94□□□□□ -1.78
USA1YML029W RPN4Q03465 531 aa3.94□□□□□ -1.78
USA1YML029W GSF2Q04697 403 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W CUE5Q08412 411 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W RPS10AQ08745 105 aaPredicted RBP3.94□□□□□ -1.78
USA1YML029W NDD1Q08887 554 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms