RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	ENT1	Q12518	454 aa		6.08	□□□□□ -1.44
RSA3	YLR221C	CHO2	P05374	869 aa	Known RBP	6.07	□□□□□ -1.44
RSA3	YLR221C	LRE1	P25579	583 aa	Known RBP	6.07	□□□□□ -1.44
RSA3	YLR221C	SIP1	P32578	815 aa		6.07	□□□□□ -1.44
RSA3	YLR221C	RPF2	P36160	344 aa	Known RBP	6.07	□□□□□ -1.44
RSA3	YLR221C	VPS8	P39702	1274 aa		6.07	□□□□□ -1.44
RSA3	YLR221C	NOP16	P40007	231 aa	Known RBP	6.07	□□□□□ -1.44
RSA3	YLR221C	GND2	P53319	492 aa		6.07	□□□□□ -1.44
RSA3	YLR221C	BSC5	P53755	489 aa		6.07	□□□□□ -1.44
RSA3	YLR221C	RCO1	Q04779	684 aa		6.07	□□□□□ -1.44
RSA3	YLR221C	IRC10	Q08118	586 aa		6.07	□□□□□ -1.44
RSA3	YLR221C	NUS1	Q12063	375 aa		6.07	□□□□□ -1.44
RSA3	YLR221C	MRPL9	P31334	269 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	PAH1	P32567	862 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	MUD2	P36084	527 aa	Known RBP	6.06	□□□□□ -1.44
RSA3	YLR221C	FUN12	P39730	1002 aa	Known RBP	6.06	□□□□□ -1.44
RSA3	YLR221C	YEL068C	P39977	110 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	BUD16	P39988	312 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	VPS4	P52917	437 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	YGL117W	P53133	265 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	COG2	P53271	262 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	YDL242W	Q07746	117 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	TMA16	Q08687	178 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	SKM1	Q12469	655 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	RTP1	Q12751	981 aa		6.06	□□□□□ -1.44
RSA3	YLR221C	AMD2	P22580	549 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	MTH1	P35198	433 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	TDP1	P38319	544 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	DJP1	P40564	432 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	OPT1	P40897	799 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	ASN1	P49089	572 aa	Known RBP	6.05	□□□□□ -1.44
RSA3	YLR221C	IMO32	P53219	342 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	YGR079W	P53249	370 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	YNL092W	P53934	400 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	REG1	Q00816	1014 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	UBP16	Q02863	499 aa		6.05	□□□□□ -1.44
RSA3	YLR221C	MRI1	Q06489	411 aa	Known RBP	6.05	□□□□□ -1.44
RSA3	YLR221C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	6.05	□□□□□ -1.44	not detected
RSA3	YLR221C	RPN13	O13563	156 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	SEM1	O94742	89 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	CDC16	P09798	840 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	TFC3	P34111	1160 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	NOC2	P39744	710 aa	Known RBP	6.04	□□□□□ -1.44
RSA3	YLR221C	YJR061W	P40355	935 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	UBP7	P40453	1071 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	AAT1	Q01802	451 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	YML119W	Q03208	357 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	WAR1	Q03631	944 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	STP3	Q05937	343 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	TSR2	Q06672	205 aa	Known RBP	6.04	□□□□□ -1.44
RSA3	YLR221C	LCB4	Q12246	624 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	MED1	Q12321	566 aa		6.04	□□□□□ -1.44
RSA3	YLR221C	YMR084W	A2P2R3	262 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	RPB2	P08518	1224 aa	Known RBP	6.03	□□□□□ -1.44
RSA3	YLR221C	STE12	P13574	688 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	SAN1	P22470	610 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	MRP20	P32387	263 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	GDA1	P32621	518 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	ARC1	P46672	376 aa	Known RBP	6.03	□□□□□ -1.44
RSA3	YLR221C	UBX6	P47049	396 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	VPS73	P53142	486 aa	Known RBP	6.03	□□□□□ -1.44
RSA3	YLR221C	MDM1	Q01846	1127 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	YPL191C	Q08930	360 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	BAG7	Q12128	409 aa		6.03	□□□□□ -1.44
RSA3	YLR221C	PRS5	Q12265	496 aa	Known RBP	6.03	□□□□□ -1.44
RSA3	YLR221C	AHA1	Q12449	350 aa	Known RBP	6.03	□□□□□ -1.44
RSA3	YLR221C	RPL7A	P05737	244 aa	Known RBP	6.02	□□□□□ -1.45
RSA3	YLR221C	YML003W	P0CF16	290 aa		6.02	□□□□□ -1.45
RSA3	YLR221C	ERC1	P38767	581 aa		6.02	□□□□□ -1.45
RSA3	YLR221C	ATF1	P40353	525 aa		6.02	□□□□□ -1.45
RSA3	YLR221C	PFK26	P40433	827 aa	Known RBP	6.02	□□□□□ -1.45
RSA3	YLR221C	RPL7B	Q12213	244 aa	Known RBP	6.02	□□□□□ -1.45
RSA3	YLR221C	VCX1	Q99385	411 aa		6.02	□□□□□ -1.45
RSA3	YLR221C	INH1	P01097	85 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	CDC24	P11433	854 aa	Predicted RBP	6.01	□□□□□ -1.45
RSA3	YLR221C	AAC3	P18238	307 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	PMA2	P19657	947 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	PRE8	P23639	250 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	ERG8	P24521	451 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	UGP1	P32861	499 aa	Known RBP	6.01	□□□□□ -1.45
RSA3	YLR221C	HES1	P35843	434 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	GEX2	P36173	615 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	SIP4	P46954	829 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	NPA3	P47122	385 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	UPF3	P48412	387 aa	Known RBP	6.01	□□□□□ -1.45
RSA3	YLR221C	YML053C	Q04978	212 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	PCL8	Q08966	492 aa		6.01	□□□□□ -1.45
RSA3	YLR221C	SAT4	P25333	603 aa	Known RBP	6	□□□□□ -1.45
RSA3	YLR221C	CDC15	P27636	974 aa		6	□□□□□ -1.45
RSA3	YLR221C	JNM1	P36224	373 aa		6	□□□□□ -1.45
RSA3	YLR221C	PSD1	P39006	500 aa		6	□□□□□ -1.45
RSA3	YLR221C	YFL015C	P43578	164 aa		6	□□□□□ -1.45
RSA3	YLR221C	MRK1	P50873	501 aa		6	□□□□□ -1.45
RSA3	YLR221C	RAD33	Q04231	177 aa		6	□□□□□ -1.45
RSA3	YLR221C	PLM2	Q04383	521 aa		6	□□□□□ -1.45
RSA3	YLR221C	YOR111W	Q99210	232 aa		6	□□□□□ -1.45
RSA3	YLR221C	COX1	P00401	534 aa		5.99	□□□□□ -1.45
RSA3	YLR221C	RFA2	P26754	273 aa	Known RBP	5.99	□□□□□ -1.45
RSA3	YLR221C	LAC1	P28496	418 aa		5.99	□□□□□ -1.45
RSA3	YLR221C	SRB5	P32585	307 aa		5.99	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms