RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C SWC3P31376 625 aa2□□□□□ -2.09
RFX1YLR176C FUN12P39730 1002 aaKnown RBP2□□□□□ -2.09
RFX1YLR176C PUG1P40100 303 aa2□□□□□ -2.09
RFX1YLR176C CIN1P40987 1014 aa2□□□□□ -2.09
RFX1YLR176C IRC7P43623 340 aa2□□□□□ -2.09
RFX1YLR176C GLO1P50107 326 aa2□□□□□ -2.09
RFX1YLR176C YNL058CP53947 316 aa2□□□□□ -2.09
RFX1YLR176C YAT1P80235 687 aa2□□□□□ -2.09
RFX1YLR176C YPL191CQ08930 360 aa2□□□□□ -2.09
RFX1YLR176C LYS21Q12122 440 aaKnown RBP2□□□□□ -2.09
RFX1YLR176C CET1O13297 549 aaPredicted RBP1.99□□□□□ -2.09
RFX1YLR176C YAP1P19880 650 aaKnown RBP1.99□□□□□ -2.09
RFX1YLR176C CLB4P24871 460 aa1.99□□□□□ -2.09
RFX1YLR176C URK1P27515 501 aa1.99□□□□□ -2.09
RFX1YLR176C LAC1P28496 418 aa1.99□□□□□ -2.09
RFX1YLR176C GCD7P32502 381 aaPredicted RBP1.99□□□□□ -2.09
RFX1YLR176C ERV46P39727 415 aa1.99□□□□□ -2.09
RFX1YLR176C SKP2P42843 763 aa1.99□□□□□ -2.09
RFX1YLR176C IMA1P53051 589 aa1.99□□□□□ -2.09
RFX1YLR176C STP3Q05937 343 aa1.99□□□□□ -2.09
RFX1YLR176C CRC1Q12289 327 aa1.99□□□□□ -2.09
RFX1YLR176C RVB2Q12464 471 aaKnown RBP1.99□□□□□ -2.09
RFX1YLR176C ILS1P09436 1072 aaKnown RBP1.99□□□□□ -2.09
RFX1YLR176C GSH1P32477 678 aa1.99□□□□□ -2.09
RFX1YLR176C ECM32P32644 1121 aaKnown RBP1.99□□□□□ -2.09
RFX1YLR176C RPT2P40327 437 aaKnown RBP1.99□□□□□ -2.09
RFX1YLR176C UBP7P40453 1071 aa1.99□□□□□ -2.09
RFX1YLR176C NOP2P40991 618 aaKnown RBP1.99□□□□□ -2.09
RFX1YLR176C GAT1P43574 510 aa1.99□□□□□ -2.09
RFX1YLR176C ZAP1P47043 880 aa1.99□□□□□ -2.09
RFX1YLR176C UBX6P47049 396 aa1.99□□□□□ -2.09
RFX1YLR176C PAP2P53632 584 aaKnown RBP1.99□□□□□ -2.09
RFX1YLR176C UBX4P54730 416 aa1.99□□□□□ -2.09
RFX1YLR176C PGI1P12709 554 aaKnown RBP1.98□□□□□ -2.09
RFX1YLR176C PTC6P25646 442 aa1.98□□□□□ -2.09
RFX1YLR176C COQ3P27680 312 aa1.98□□□□□ -2.09
RFX1YLR176C FSH1P38777 243 aaKnown RBP1.98□□□□□ -2.09
RFX1YLR176C ACA1P39970 489 aa1.98□□□□□ -2.09
RFX1YLR176C TRS130Q03660 1102 aa1.98□□□□□ -2.09
RFX1YLR176C YDR109CQ04585 715 aa1.98□□□□□ -2.09
RFX1YLR176C YAP7Q08182 245 aa1.98□□□□□ -2.09
RFX1YLR176C LEA1Q08963 238 aaPredicted RBP1.98□□□□□ -2.09
RFX1YLR176C PFA4Q12006 378 aa1.98□□□□□ -2.09
RFX1YLR176C RGT2Q12300 763 aa1.98□□□□□ -2.09
RFX1YLR176C ICT1Q12385 394 aa1.98□□□□□ -2.09
RFX1YLR176C BIK1P11709 440 aa1.98□□□□□ -2.09
RFX1YLR176C NCP1P16603 691 aaKnown RBP1.98□□□□□ -2.09
RFX1YLR176C TMT1P32643 299 aa1.98□□□□□ -2.09
RFX1YLR176C HES1P35843 434 aa1.98□□□□□ -2.09
RFX1YLR176C YIL024CP40543 189 aa1.98□□□□□ -2.09
RFX1YLR176C FAF1P40546 346 aaPredicted RBP1.98□□□□□ -2.09
RFX1YLR176C SNM1P40993 198 aa1.98□□□□□ -2.09
RFX1YLR176C ERR3P42222 437 aa1.98□□□□□ -2.09
RFX1YLR176C COP1P53622 1201 aaKnown RBP1.98□□□□□ -2.09
RFX1YLR176C MTG1Q03151 367 aaPredicted RBP1.98□□□□□ -2.09
RFX1YLR176C GTB1Q04924 702 aa1.98□□□□□ -2.09
RFX1YLR176C MSM1P22438 575 aa1.97□□□□□ -2.09
RFX1YLR176C FLO5P38894 1075 aa1.97□□□□□ -2.09
RFX1YLR176C BUD16P39988 312 aa1.97□□□□□ -2.09
RFX1YLR176C JHD1P40034 492 aa1.97□□□□□ -2.09
RFX1YLR176C PSF2P40359 213 aa1.97□□□□□ -2.09
RFX1YLR176C TPM2P40414 161 aa1.97□□□□□ -2.09
RFX1YLR176C MNT3P40549 630 aa1.97□□□□□ -2.09
RFX1YLR176C YPR003CP53394 754 aa1.97□□□□□ -2.09
RFX1YLR176C ARC35P53731 342 aaKnown RBP1.97□□□□□ -2.09
RFX1YLR176C SEC5P89102 971 aa1.97□□□□□ -2.09
RFX1YLR176C CIA1Q05583 330 aa1.97□□□□□ -2.09
RFX1YLR176C THI3Q07471 609 aa1.97□□□□□ -2.09
RFX1YLR176C GAL4P04386 881 aa1.97□□□□□ -2.09
RFX1YLR176C RFA2P26754 273 aaKnown RBP1.97□□□□□ -2.09
RFX1YLR176C GEP3Q08622 556 aa1.97□□□□□ -2.09
RFX1YLR176C GET3Q12154 354 aaKnown RBP1.97□□□□□ -2.09
RFX1YLR176C NUC1P08466 329 aa1.96□□□□□ -2.1
RFX1YLR176C YCL049CP25577 312 aa1.96□□□□□ -2.1
RFX1YLR176C DBF20P32328 564 aa1.96□□□□□ -2.1
RFX1YLR176C MSS51P32335 436 aa1.96□□□□□ -2.1
RFX1YLR176C CFD1P40558 293 aa1.96□□□□□ -2.1
RFX1YLR176C ORC5P50874 479 aa1.96□□□□□ -2.1
RFX1YLR176C YRB30P53107 440 aaPredicted RBP1.96□□□□□ -2.1
RFX1YLR176C ADE16P54113 591 aaKnown RBP1.96□□□□□ -2.1
RFX1YLR176C BLS1Q06071 122 aa1.96□□□□□ -2.1
RFX1YLR176C COX17Q12287 69 aa1.96□□□□□ -2.1
RFX1YLR176C YML003WP0CF16 290 aa1.96□□□□□ -2.1
RFX1YLR176C LRE1P25579 583 aaKnown RBP1.96□□□□□ -2.1
RFX1YLR176C DJP1P40564 432 aa1.96□□□□□ -2.1
RFX1YLR176C MSY1P48527 492 aa1.96□□□□□ -2.1
RFX1YLR176C VAM6Q07468 1049 aa1.96□□□□□ -2.1
RFX1YLR176C HER1Q12276 1246 aa1.96□□□□□ -2.1
RFX1YLR176C ATP2P00830 511 aaKnown RBP1.95□□□□□ -2.1
RFX1YLR176C YER190C-BP0CX94 160 aa1.95□□□□□ -2.1
RFX1YLR176C YEL077W-AP0CX95 160 aa1.95□□□□□ -2.1
RFX1YLR176C YGR296C-BP0CX96 160 aa1.95□□□□□ -2.1
RFX1YLR176C YPL283W-BP0CX97 160 aa1.95□□□□□ -2.1
RFX1YLR176C YPR204C-AP0CX98 160 aa1.95□□□□□ -2.1
RFX1YLR176C RPT3P33298 428 aaKnown RBP1.95□□□□□ -2.1
RFX1YLR176C NUP120P35729 1037 aa1.95□□□□□ -2.1
RFX1YLR176C MRPL36P36531 177 aa1.95□□□□□ -2.1
RFX1YLR176C EXO84P38261 753 aa1.95□□□□□ -2.1
RFX1YLR176C YMR124WP39523 943 aaKnown RBP1.95□□□□□ -2.1
RFX1YLR176C YIL161WP40449 235 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms