RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REX3	YLR107W	YGR079W	P53249	370 aa		5.56	□□□□□ -1.52
REX3	YLR107W	YAT1	P80235	687 aa		5.56	□□□□□ -1.52
REX3	YLR107W	YPL071C	Q02864	156 aa		5.56	□□□□□ -1.52
REX3	YLR107W	TPO3	Q06451	622 aa		5.56	□□□□□ -1.52
REX3	YLR107W	LYS21	Q12122	440 aa	Known RBP	5.56	□□□□□ -1.52
REX3	YLR107W	NCP1	P16603	691 aa	Known RBP	5.55	□□□□□ -1.52
REX3	YLR107W	YCL049C	P25577	312 aa		5.55	□□□□□ -1.52
REX3	YLR107W	IMD2	P38697	523 aa	Known RBP	5.55	□□□□□ -1.52
REX3	YLR107W	SNO3	P43544	222 aa		5.55	□□□□□ -1.52
REX3	YLR107W	IMD3	P50095	523 aa	Known RBP	5.55	□□□□□ -1.52
REX3	YLR107W	RSC9	Q03124	581 aa		5.55	□□□□□ -1.52
REX3	YLR107W	TRS130	Q03660	1102 aa		5.55	□□□□□ -1.52
REX3	YLR107W	PRS5	Q12265	496 aa	Known RBP	5.55	□□□□□ -1.52
REX3	YLR107W	URE2	P23202	354 aa	Known RBP	5.54	□□□□□ -1.52
REX3	YLR107W	HES1	P35843	434 aa		5.54	□□□□□ -1.52
REX3	YLR107W	PSA1	P41940	361 aa	Known RBP	5.54	□□□□□ -1.52
REX3	YLR107W	ARC35	P53731	342 aa	Known RBP	5.54	□□□□□ -1.52
REX3	YLR107W	IDP3	P53982	420 aa	Known RBP	5.54	□□□□□ -1.52
REX3	YLR107W	RVB2	Q12464	471 aa	Known RBP	5.54	□□□□□ -1.52
REX3	YLR107W	LAC1	P28496	418 aa		5.53	□□□□□ -1.52
REX3	YLR107W	GSH1	P32477	678 aa		5.53	□□□□□ -1.52
REX3	YLR107W	FUN12	P39730	1002 aa	Known RBP	5.53	□□□□□ -1.52
REX3	YLR107W	CIN1	P40987	1014 aa		5.53	□□□□□ -1.52
REX3	YLR107W	ERG13	P54839	491 aa	Known RBP	5.53	□□□□□ -1.52
REX3	YLR107W	MTG1	Q03151	367 aa	Predicted RBP	5.53	□□□□□ -1.52
REX3	YLR107W	VAM6	Q07468	1049 aa		5.53	□□□□□ -1.52
REX3	YLR107W	COX1	P00401	534 aa		5.52	□□□□□ -1.53
REX3	YLR107W	MTF2	P10849	440 aa		5.52	□□□□□ -1.53
REX3	YLR107W	PTP1	P25044	335 aa		5.52	□□□□□ -1.53
REX3	YLR107W	NPR3	P38742	1146 aa		5.52	□□□□□ -1.53
REX3	YLR107W	IES5	P40060	125 aa		5.52	□□□□□ -1.53
REX3	YLR107W	UBP7	P40453	1071 aa		5.52	□□□□□ -1.53
REX3	YLR107W	FAF1	P40546	346 aa	Predicted RBP	5.52	□□□□□ -1.53
REX3	YLR107W	SKP2	P42843	763 aa		5.52	□□□□□ -1.53
REX3	YLR107W	NET1	P47035	1189 aa		5.52	□□□□□ -1.53
REX3	YLR107W	ZAP1	P47043	880 aa		5.52	□□□□□ -1.53
REX3	YLR107W	YRB30	P53107	440 aa	Predicted RBP	5.52	□□□□□ -1.53
REX3	YLR107W	ILV2	P07342	687 aa	Known RBP	5.51	□□□□□ -1.53
REX3	YLR107W	PTC6	P25646	442 aa		5.51	□□□□□ -1.53
REX3	YLR107W	DBF20	P32328	564 aa		5.51	□□□□□ -1.53
REX3	YLR107W	GCD7	P32502	381 aa	Predicted RBP	5.51	□□□□□ -1.53
REX3	YLR107W	ERV46	P39727	415 aa		5.51	□□□□□ -1.53
REX3	YLR107W	ERR3	P42222	437 aa		5.51	□□□□□ -1.53
REX3	YLR107W	IRC7	P43623	340 aa		5.51	□□□□□ -1.53
REX3	YLR107W	SNU56	Q03782	492 aa	Known RBP	5.51	□□□□□ -1.53
REX3	YLR107W	BLS1	Q06071	122 aa		5.51	□□□□□ -1.53
REX3	YLR107W	YOR389W	Q08912	624 aa		5.51	□□□□□ -1.53
REX3	YLR107W	PTH2	P34222	208 aa		5.5	□□□□□ -1.53
REX3	YLR107W	RTS3	P53289	263 aa		5.5	□□□□□ -1.53
REX3	YLR107W	ATG23	Q06671	453 aa		5.5	□□□□□ -1.53
REX3	YLR107W	LEA1	Q08963	238 aa	Predicted RBP	5.5	□□□□□ -1.53
REX3	YLR107W	ILS1	P09436	1072 aa	Known RBP	5.49	□□□□□ -1.53
REX3	YLR107W	YML003W	P0CF16	290 aa		5.49	□□□□□ -1.53
REX3	YLR107W	YMR085W	P0CF18	432 aa		5.49	□□□□□ -1.53
REX3	YLR107W	LRE1	P25579	583 aa	Known RBP	5.49	□□□□□ -1.53
REX3	YLR107W	ECM32	P32644	1121 aa	Known RBP	5.49	□□□□□ -1.53
REX3	YLR107W	GEX2	P36173	615 aa		5.49	□□□□□ -1.53
REX3	YLR107W	UBX6	P47049	396 aa		5.49	□□□□□ -1.53
REX3	YLR107W	MSY1	P48527	492 aa		5.49	□□□□□ -1.53
REX3	YLR107W	STP1	Q00947	519 aa		5.49	□□□□□ -1.53
REX3	YLR107W	MRPL13	Q02204	264 aa		5.49	□□□□□ -1.53
REX3	YLR107W	STP3	Q05937	343 aa		5.49	□□□□□ -1.53
REX3	YLR107W	TFC6	Q06339	672 aa		5.49	□□□□□ -1.53
REX3	YLR107W	AFT2	Q08957	416 aa		5.49	□□□□□ -1.53
REX3	YLR107W	BAG7	Q12128	409 aa		5.49	□□□□□ -1.53
REX3	YLR107W	UBC1	P21734	215 aa	Known RBP	5.48	□□□□□ -1.53
REX3	YLR107W	VPS24	P36095	224 aa	Known RBP	5.48	□□□□□ -1.53
REX3	YLR107W	MRPL36	P36531	177 aa		5.48	□□□□□ -1.53
REX3	YLR107W	EXO84	P38261	753 aa		5.48	□□□□□ -1.53
REX3	YLR107W	PHM8	P40025	321 aa		5.48	□□□□□ -1.53
REX3	YLR107W	PSF2	P40359	213 aa		5.48	□□□□□ -1.53
REX3	YLR107W	DJP1	P40564	432 aa		5.48	□□□□□ -1.53
REX3	YLR107W	SAP185	P40856	1058 aa		5.48	□□□□□ -1.53
REX3	YLR107W	ATG16	Q03818	150 aa		5.48	□□□□□ -1.53
REX3	YLR107W	GET3	Q12154	354 aa	Known RBP	5.48	□□□□□ -1.53
REX3	YLR107W	CRC1	Q12289	327 aa		5.48	□□□□□ -1.53
REX3	YLR107W	PWP2	P25635	923 aa	Known RBP	5.47	□□□□□ -1.53
REX3	YLR107W	COQ3	P27680	312 aa		5.47	□□□□□ -1.53
REX3	YLR107W	YDR109C	Q04585	715 aa		5.47	□□□□□ -1.53
REX3	YLR107W	THI3	Q07471	609 aa		5.47	□□□□□ -1.53
REX3	YLR107W	NUC1	P08466	329 aa		5.46	□□□□□ -1.54
REX3	YLR107W	PCT1	P13259	424 aa		5.46	□□□□□ -1.54
REX3	YLR107W	YAP1	P19880	650 aa	Known RBP	5.46	□□□□□ -1.54
REX3	YLR107W	RFA2	P26754	273 aa	Known RBP	5.46	□□□□□ -1.54
REX3	YLR107W	CDC1	P40986	491 aa		5.46	□□□□□ -1.54
REX3	YLR107W	CSL4	P53859	292 aa	Predicted RBP	5.46	□□□□□ -1.54
REX3	YLR107W	VMS1	Q04311	632 aa	Known RBP	5.46	□□□□□ -1.54
REX3	YLR107W	SWT1	Q12104	458 aa		5.46	□□□□□ -1.54
REX3	YLR107W	YSP3	P25036	478 aa		5.45	□□□□□ -1.54
REX3	YLR107W	MRS6	P32864	603 aa	Known RBP	5.45	□□□□□ -1.54
REX3	YLR107W	XRS2	P33301	854 aa		5.45	□□□□□ -1.54
REX3	YLR107W	NUP120	P35729	1037 aa		5.45	□□□□□ -1.54
REX3	YLR107W	IFA38	P38286	347 aa		5.45	□□□□□ -1.54
REX3	YLR107W	SMK1	P41808	388 aa		5.45	□□□□□ -1.54
REX3	YLR107W	ORC5	P50874	479 aa		5.45	□□□□□ -1.54
REX3	YLR107W	YPR003C	P53394	754 aa		5.45	□□□□□ -1.54
REX3	YLR107W	COP1	P53622	1201 aa	Known RBP	5.45	□□□□□ -1.54
REX3	YLR107W	CSR1	Q06705	408 aa	Known RBP	5.45	□□□□□ -1.54
REX3	YLR107W	PSR2	Q07949	397 aa		5.45	□□□□□ -1.54
REX3	YLR107W	ATP2	P00830	511 aa	Known RBP	5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms