RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YSH1Q06224 779 aaPredicted RBP3.68□□□□□ -1.82
SDO1YLR022C YFT2Q06676 274 aa3.68□□□□□ -1.82
SDO1YLR022C VHS3Q08438 674 aa3.68□□□□□ -1.82
SDO1YLR022C AFT2Q08957 416 aa3.68□□□□□ -1.82
SDO1YLR022C IME1P21190 360 aa3.67□□□□□ -1.82
SDO1YLR022C CHS3P29465 1165 aa3.67□□□□□ -1.82
SDO1YLR022C NTH1P32356 751 aa3.67□□□□□ -1.82
SDO1YLR022C SFP1P32432 683 aa3.67□□□□□ -1.82
SDO1YLR022C ECM32P32644 1121 aaKnown RBP3.67□□□□□ -1.82
SDO1YLR022C YMC2P38087 329 aa3.67□□□□□ -1.82
SDO1YLR022C YHR097CP38809 366 aaKnown RBP3.67□□□□□ -1.82
SDO1YLR022C MNN1P39106 762 aa3.67□□□□□ -1.82
SDO1YLR022C MIT1P40002 666 aa3.67□□□□□ -1.82
SDO1YLR022C YIR016WP40572 265 aa3.67□□□□□ -1.82
SDO1YLR022C SDA1P53313 767 aaKnown RBP3.67□□□□□ -1.82
SDO1YLR022C UTP14Q04500 899 aaKnown RBP3.67□□□□□ -1.82
SDO1YLR022C YLR407WQ06070 228 aa3.67□□□□□ -1.82
SDO1YLR022C RTT109Q07794 436 aa3.67□□□□□ -1.82
SDO1YLR022C RKI1Q12189 258 aa3.67□□□□□ -1.82
SDO1YLR022C TY1B-AO13527 1196 aaKnown RBP3.66□□□□□ -1.82
SDO1YLR022C MSS51P32335 436 aa3.66□□□□□ -1.82
SDO1YLR022C RAD24P32641 659 aa3.66□□□□□ -1.82
SDO1YLR022C MRPL7P36519 292 aa3.66□□□□□ -1.82
SDO1YLR022C COS111P38308 924 aa3.66□□□□□ -1.82
SDO1YLR022C RIM4P38741 713 aa3.66□□□□□ -1.82
SDO1YLR022C CKB2P38930 258 aa3.66□□□□□ -1.82
SDO1YLR022C MAF1P41910 395 aa3.66□□□□□ -1.82
SDO1YLR022C SNF12P53628 566 aa3.66□□□□□ -1.82
SDO1YLR022C STP1Q00947 519 aa3.66□□□□□ -1.82
SDO1YLR022C YMR210WQ03649 449 aa3.66□□□□□ -1.82
SDO1YLR022C VBA4Q04602 768 aaKnown RBP3.66□□□□□ -1.82
SDO1YLR022C PHO5P00635 467 aa3.65□□□□□ -1.83
SDO1YLR022C RPS14AP06367 137 aaKnown RBP3.65□□□□□ -1.83
SDO1YLR022C SEC15P22224 910 aa3.65□□□□□ -1.83
SDO1YLR022C APL3P38065 1025 aa3.65□□□□□ -1.83
SDO1YLR022C TDA3P38758 523 aa3.65□□□□□ -1.83
SDO1YLR022C FPR3P38911 411 aaKnown RBP3.65□□□□□ -1.83
SDO1YLR022C RPS14BP39516 138 aaKnown RBP3.65□□□□□ -1.83
SDO1YLR022C YJR096WP47137 282 aa3.65□□□□□ -1.83
SDO1YLR022C NMA2P53204 395 aa3.65□□□□□ -1.83
SDO1YLR022C SPC98P53540 846 aa3.65□□□□□ -1.83
SDO1YLR022C THI7Q05998 598 aa3.65□□□□□ -1.83
SDO1YLR022C YPS7Q06325 596 aa3.65□□□□□ -1.83
SDO1YLR022C MRI1Q06489 411 aaKnown RBP3.65□□□□□ -1.83
SDO1YLR022C IZH3Q07959 543 aa3.65□□□□□ -1.83
SDO1YLR022C BEM2P39960 2167 aaKnown RBP3.64□□□□□ -1.83
SDO1YLR022C VPS34P22543 875 aa3.64□□□□□ -1.83
SDO1YLR022C PRP22P24384 1145 aaKnown RBP3.64□□□□□ -1.83
SDO1YLR022C DID4P36108 232 aa3.64□□□□□ -1.83
SDO1YLR022C VID27P40157 782 aa3.64□□□□□ -1.83
SDO1YLR022C CCT5P40413 562 aaKnown RBP3.64□□□□□ -1.83
SDO1YLR022C ESL1P40456 1118 aa3.64□□□□□ -1.83
SDO1YLR022C BUD8P41698 603 aa3.64□□□□□ -1.83
SDO1YLR022C PMT6P42934 759 aa3.64□□□□□ -1.83
SDO1YLR022C BFA1P47113 574 aa3.64□□□□□ -1.83
SDO1YLR022C YGR266WP53326 701 aa3.64□□□□□ -1.83
SDO1YLR022C YAT1P80235 687 aa3.64□□□□□ -1.83
SDO1YLR022C HOF1Q05080 669 aa3.64□□□□□ -1.83
SDO1YLR022C YAP7Q08182 245 aa3.64□□□□□ -1.83
SDO1YLR022C BUD2P33314 1104 aa3.63□□□□□ -1.83
SDO1YLR022C PPE1P38796 400 aa3.63□□□□□ -1.83
SDO1YLR022C VPS8P39702 1274 aa3.63□□□□□ -1.83
SDO1YLR022C PXA1P41909 870 aa3.63□□□□□ -1.83
SDO1YLR022C SPO1P53541 631 aa3.63□□□□□ -1.83
SDO1YLR022C YNR061CP53747 219 aa3.63□□□□□ -1.83
SDO1YLR022C NOP15P53927 220 aaPredicted RBP3.63□□□□□ -1.83
SDO1YLR022C YDR179W-AQ03983 463 aa3.63□□□□□ -1.83
SDO1YLR022C YHM2Q04013 314 aa3.63□□□□□ -1.83
SDO1YLR022C PPN1Q04119 674 aa3.63□□□□□ -1.83
SDO1YLR022C UFO1Q04511 668 aa3.63□□□□□ -1.83
SDO1YLR022C VIP1Q06685 1146 aaKnown RBP3.63□□□□□ -1.83
SDO1YLR022C STP4Q07351 490 aa3.63□□□□□ -1.83
SDO1YLR022C OSW1Q08692 278 aa3.63□□□□□ -1.83
SDO1YLR022C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SDO1YLR022C RPS17AP02407 136 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C HMG2P12684 1045 aa3.62□□□□□ -1.83
SDO1YLR022C STE12P13574 688 aa3.62□□□□□ -1.83
SDO1YLR022C RPS17BP14127 136 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C SAT4P25333 603 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C PRP19P32523 503 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C ORC2P32833 620 aa3.62□□□□□ -1.83
SDO1YLR022C UGP1P32861 499 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C GCS1P35197 352 aa3.62□□□□□ -1.83
SDO1YLR022C LEU5P38702 357 aa3.62□□□□□ -1.83
SDO1YLR022C PMC1P38929 1173 aaPredicted RBP3.62□□□□□ -1.83
SDO1YLR022C VPS45P38932 577 aa3.62□□□□□ -1.83
SDO1YLR022C IES1P43579 692 aa3.62□□□□□ -1.83
SDO1YLR022C YGR153WP48238 217 aa3.62□□□□□ -1.83
SDO1YLR022C ASN1P49089 572 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C ALT2P52892 507 aa3.62□□□□□ -1.83
SDO1YLR022C LIF1P53150 421 aa3.62□□□□□ -1.83
SDO1YLR022C DIP5P53388 608 aa3.62□□□□□ -1.83
SDO1YLR022C FDC1Q03034 503 aa3.62□□□□□ -1.83
SDO1YLR022C NSE5Q03718 556 aa3.62□□□□□ -1.83
SDO1YLR022C MRD1Q06106 887 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C APM4Q99186 491 aa3.62□□□□□ -1.83
SDO1YLR022C UTP20P35194 2493 aaKnown RBP3.62□□□□□ -1.83
SDO1YLR022C TPK2P06245 380 aa3.61□□□□□ -1.83
SDO1YLR022C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SDO1YLR022C RTS1P38903 757 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms