RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	SMK1	P41808	388 aa		4.83	□□□□□ -1.64
EBP2	YKL172W	SAE2	P46946	345 aa		4.83	□□□□□ -1.64
EBP2	YKL172W	BPL1	P48445	690 aa	Predicted RBP	4.83	□□□□□ -1.64
EBP2	YKL172W	YGR021W	P53212	290 aa		4.83	□□□□□ -1.64
EBP2	YKL172W	ARC35	P53731	342 aa	Known RBP	4.83	□□□□□ -1.64
EBP2	YKL172W	CIA1	Q05583	330 aa		4.83	□□□□□ -1.64
EBP2	YKL172W	PNO1	Q99216	274 aa	Known RBP	4.83	□□□□□ -1.64
EBP2	YKL172W	SSM4	P40318	1319 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	SES1	P07284	462 aa	Known RBP	4.82	□□□□□ -1.64
EBP2	YKL172W	NCP1	P16603	691 aa	Known RBP	4.82	□□□□□ -1.64
EBP2	YKL172W	URK1	P27515	501 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	RAD16	P31244	790 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	FUI1	P38196	639 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	UBX6	P47049	396 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	YAT1	P80235	687 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	RIM13	Q03792	727 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	THI7	Q05998	598 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	CSR1	Q06705	408 aa	Known RBP	4.82	□□□□□ -1.64
EBP2	YKL172W	Q0010	Q9ZZX9	128 aa		4.82	□□□□□ -1.64
EBP2	YKL172W	SPO16	P17122	198 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	UBC1	P21734	215 aa	Known RBP	4.81	□□□□□ -1.64
EBP2	YKL172W	MBR1	P23493	339 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	LRE1	P25579	583 aa	Known RBP	4.81	□□□□□ -1.64
EBP2	YKL172W	HES1	P35843	434 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	LTP1	P40347	161 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	YIL161W	P40449	235 aa	Known RBP	4.81	□□□□□ -1.64
EBP2	YKL172W	DJP1	P40564	432 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	NPA3	P47122	385 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	YRB30	P53107	440 aa	Predicted RBP	4.81	□□□□□ -1.64
EBP2	YKL172W	TAM41	P53230	385 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	YGR079W	P53249	370 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	YPL071C	Q02864	156 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	VAM6	Q07468	1049 aa		4.81	□□□□□ -1.64
EBP2	YKL172W	CET1	O13297	549 aa	Predicted RBP	4.8	□□□□□ -1.64
EBP2	YKL172W	ILV2	P07342	687 aa	Known RBP	4.8	□□□□□ -1.64
EBP2	YKL172W	NUP1	P20676	1076 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	APN1	P22936	367 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	LAC1	P28496	418 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	YPT53	P36019	220 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	PSY4	P38193	441 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	FTH1	P38310	465 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	ERR3	P42222	437 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	TPO3	Q06451	622 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	BAG7	Q12128	409 aa		4.8	□□□□□ -1.64
EBP2	YKL172W	TPK1	P06244	397 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	BEM3	P32873	1128 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	UME6	P39001	836 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	BUD16	P39988	312 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	SNO3	P43544	222 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	NMD5	P46970	1048 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	IML2	P47031	731 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	RAD34	Q06665	692 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	YOR389W	Q08912	624 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	SWT1	Q12104	458 aa		4.79	□□□□□ -1.64
EBP2	YKL172W	LYS21	Q12122	440 aa	Known RBP	4.79	□□□□□ -1.64
EBP2	YKL172W	ATP2	P00830	511 aa	Known RBP	4.78	□□□□□ -1.64
EBP2	YKL172W	ILS1	P09436	1072 aa	Known RBP	4.78	□□□□□ -1.64
EBP2	YKL172W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
EBP2	YKL172W	URE2	P23202	354 aa	Known RBP	4.78	□□□□□ -1.64
EBP2	YKL172W	PTC6	P25646	442 aa		4.78	□□□□□ -1.64
EBP2	YKL172W	RPT3	P33298	428 aa	Known RBP	4.78	□□□□□ -1.64
EBP2	YKL172W	PHM8	P40025	321 aa		4.78	□□□□□ -1.64
EBP2	YKL172W	CTF18	P49956	741 aa		4.78	□□□□□ -1.64
EBP2	YKL172W	GTR1	Q00582	310 aa		4.78	□□□□□ -1.64
EBP2	YKL172W	YML122C	Q03207	126 aa		4.78	□□□□□ -1.64
EBP2	YKL172W	LEA1	Q08963	238 aa	Predicted RBP	4.78	□□□□□ -1.64
EBP2	YKL172W	PRS5	Q12265	496 aa	Known RBP	4.78	□□□□□ -1.64
EBP2	YKL172W	YLR111W	Q12528	110 aa		4.78	□□□□□ -1.64
EBP2	YKL172W	RTC1	Q08281	1341 aa		4.77	□□□□□ -1.65
EBP2	YKL172W	COX1	P00401	534 aa		4.77	□□□□□ -1.65
EBP2	YKL172W	ULP2	P40537	1034 aa	Predicted RBP	4.77	□□□□□ -1.65
EBP2	YKL172W	ASE1	P50275	885 aa		4.77	□□□□□ -1.65
EBP2	YKL172W	CSL4	P53859	292 aa	Predicted RBP	4.77	□□□□□ -1.65
EBP2	YKL172W	ERG13	P54839	491 aa	Known RBP	4.77	□□□□□ -1.65
EBP2	YKL172W	ECM16	Q04217	1267 aa	Known RBP	4.77	□□□□□ -1.65
EBP2	YKL172W	TRX2	P22803	104 aa	Known RBP	4.76	□□□□□ -1.65
EBP2	YKL172W	MAK32	P23060	363 aa		4.76	□□□□□ -1.65
EBP2	YKL172W	TEF4	P36008	412 aa	Known RBP	4.76	□□□□□ -1.65
EBP2	YKL172W	KAP123	P40069	1113 aa	Known RBP	4.76	□□□□□ -1.65
EBP2	YKL172W	IST3	P40565	148 aa	Predicted RBP	4.76	□□□□□ -1.65
EBP2	YKL172W	IRC7	P43623	340 aa		4.76	□□□□□ -1.65
EBP2	YKL172W	COG1	P53079	417 aa		4.76	□□□□□ -1.65
EBP2	YKL172W	DCP2	P53550	970 aa	Known RBP	4.76	□□□□□ -1.65
EBP2	YKL172W	IDP3	P53982	420 aa	Known RBP	4.76	□□□□□ -1.65
EBP2	YKL172W	SNU56	Q03782	492 aa	Known RBP	4.76	□□□□□ -1.65
EBP2	YKL172W	YDR109C	Q04585	715 aa		4.76	□□□□□ -1.65
EBP2	YKL172W	COX17	Q12287	69 aa		4.76	□□□□□ -1.65
EBP2	YKL172W	TY2A-LR1	P0C2J4	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-F	P0CX61	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-GR2	P0CX62	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-C	P25383	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	IFA38	P38286	347 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	ASG1	P40467	964 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	PSA1	P41940	361 aa	Known RBP	4.75	□□□□□ -1.65
EBP2	YKL172W	BNA3	P47039	444 aa	Known RBP	4.75	□□□□□ -1.65
EBP2	YKL172W	MSY1	P48527	492 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-DR2	Q03483	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TFC6	Q06339	672 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-B	Q12260	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-OR2	Q12293	438 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms