RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W RCR2Q03446 210 aaKnown RBP5.65□□□□□ -1.5
CBF1YJR060W EBS1Q03466 884 aaKnown RBP5.65□□□□□ -1.5
CBF1YJR060W GIS3Q12418 502 aa5.65□□□□□ -1.5
CBF1YJR060W HIP1P06775 603 aa5.64□□□□□ -1.51
CBF1YJR060W ASP3-2P0CX77 362 aa5.64□□□□□ -1.51
CBF1YJR060W ASP3-3P0CX78 362 aa5.64□□□□□ -1.51
CBF1YJR060W ASP3-4P0CX79 362 aa5.64□□□□□ -1.51
CBF1YJR060W ASP3-1P0CZ17 362 aa5.64□□□□□ -1.51
CBF1YJR060W RPL4AP10664 362 aaKnown RBP5.64□□□□□ -1.51
CBF1YJR060W SST2P11972 698 aaKnown RBP5.64□□□□□ -1.51
CBF1YJR060W HMG1P12683 1054 aa5.64□□□□□ -1.51
CBF1YJR060W RFA1P22336 621 aaKnown RBP5.64□□□□□ -1.51
CBF1YJR060W RSA4P25382 515 aaKnown RBP5.64□□□□□ -1.51
CBF1YJR060W DPB3P27344 201 aa5.64□□□□□ -1.51
CBF1YJR060W TOD6P34219 525 aa5.64□□□□□ -1.51
CBF1YJR060W SAP190P36123 1033 aa5.64□□□□□ -1.51
CBF1YJR060W CCL1P37366 393 aa5.64□□□□□ -1.51
CBF1YJR060W SDS3P40505 327 aa5.64□□□□□ -1.51
CBF1YJR060W ALY2P47029 1046 aa5.64□□□□□ -1.51
CBF1YJR060W SMC3P47037 1230 aa5.64□□□□□ -1.51
CBF1YJR060W RPL4BP49626 362 aaKnown RBP5.64□□□□□ -1.51
CBF1YJR060W SFB2P53953 876 aa5.64□□□□□ -1.51
CBF1YJR060W ATG16Q03818 150 aa5.64□□□□□ -1.51
CBF1YJR060W YDR132CQ03900 495 aa5.64□□□□□ -1.51
CBF1YJR060W NHX1Q04121 633 aa5.64□□□□□ -1.51
CBF1YJR060W YOL075CQ08234 1294 aa5.64□□□□□ -1.51
CBF1YJR060W GPB1Q08886 897 aa5.64□□□□□ -1.51
CBF1YJR060W HAP2P06774 265 aa5.63□□□□□ -1.51
CBF1YJR060W COX11P19516 300 aaKnown RBP5.63□□□□□ -1.51
CBF1YJR060W VPS3P23643 1011 aa5.63□□□□□ -1.51
CBF1YJR060W ADK2P26364 225 aa5.63□□□□□ -1.51
CBF1YJR060W SYN8P31377 255 aa5.63□□□□□ -1.51
CBF1YJR060W VPH1P32563 840 aaKnown RBP5.63□□□□□ -1.51
CBF1YJR060W KDX1P36005 433 aa5.63□□□□□ -1.51
CBF1YJR060W KAP123P40069 1113 aaKnown RBP5.63□□□□□ -1.51
CBF1YJR060W MMF1P40185 145 aaKnown RBP5.63□□□□□ -1.51
CBF1YJR060W TAD1P53065 400 aa5.63□□□□□ -1.51
CBF1YJR060W WAR1Q03631 944 aa5.63□□□□□ -1.51
CBF1YJR060W YLR297WQ05899 129 aa5.63□□□□□ -1.51
CBF1YJR060W CSR1Q06705 408 aaKnown RBP5.63□□□□□ -1.51
CBF1YJR060W RXT3Q07458 294 aa5.63□□□□□ -1.51
CBF1YJR060W ESC8Q08119 714 aa5.63□□□□□ -1.51
CBF1YJR060W TMA16Q08687 178 aa5.63□□□□□ -1.51
CBF1YJR060W RMP1Q12530 201 aa5.63□□□□□ -1.51
CBF1YJR060W GAL80P04387 435 aa5.62□□□□□ -1.51
CBF1YJR060W ATP1P07251 545 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W KGD2P19262 463 aaPredicted RBP5.62□□□□□ -1.51
CBF1YJR060W SPO11P23179 398 aa5.62□□□□□ -1.51
CBF1YJR060W PRR1P28708 518 aa5.62□□□□□ -1.51
CBF1YJR060W SEC21P32074 935 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W SRP101P32916 621 aa5.62□□□□□ -1.51
CBF1YJR060W THI80P35202 319 aa5.62□□□□□ -1.51
CBF1YJR060W RPC25P35718 212 aa5.62□□□□□ -1.51
CBF1YJR060W YET1P35723 206 aa5.62□□□□□ -1.51
CBF1YJR060W HMT1P38074 348 aa5.62□□□□□ -1.51
CBF1YJR060W PSY4P38193 441 aa5.62□□□□□ -1.51
CBF1YJR060W SPT8P38915 602 aa5.62□□□□□ -1.51
CBF1YJR060W MND2P40577 368 aa5.62□□□□□ -1.51
CBF1YJR060W FYV8P46949 817 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W MNN11P46985 422 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W YJR054WP47114 497 aa5.62□□□□□ -1.51
CBF1YJR060W YGR012WP53206 393 aa5.62□□□□□ -1.51
CBF1YJR060W RSC1P53236 928 aa5.62□□□□□ -1.51
CBF1YJR060W SPC98P53540 846 aa5.62□□□□□ -1.51
CBF1YJR060W NOG2P53742 486 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W ESBP6P53918 673 aa5.62□□□□□ -1.51
CBF1YJR060W YVH1Q02256 364 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W EMI2Q04409 500 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W YPR078CQ06813 372 aa5.62□□□□□ -1.51
CBF1YJR060W IWR1Q07532 353 aaPredicted RBP5.62□□□□□ -1.51
CBF1YJR060W PLP2Q12017 286 aa5.62□□□□□ -1.51
CBF1YJR060W PKH2Q12236 1081 aaKnown RBP5.62□□□□□ -1.51
CBF1YJR060W PRC1P00729 532 aa5.61□□□□□ -1.51
CBF1YJR060W RPC82P32349 654 aa5.61□□□□□ -1.51
CBF1YJR060W TRZ1P36159 838 aaPredicted RBP5.61□□□□□ -1.51
CBF1YJR060W HSL7P38274 827 aa5.61□□□□□ -1.51
CBF1YJR060W STB5P38699 743 aa5.61□□□□□ -1.51
CBF1YJR060W TDA3P38758 523 aa5.61□□□□□ -1.51
CBF1YJR060W MIP6P38760 659 aaKnown RBP5.61□□□□□ -1.51
CBF1YJR060W YFL052WP43551 465 aa5.61□□□□□ -1.51
CBF1YJR060W NIT2P47016 307 aa5.61□□□□□ -1.51
CBF1YJR060W CPR7P47103 393 aa5.61□□□□□ -1.51
CBF1YJR060W VPS75P53853 264 aa5.61□□□□□ -1.51
CBF1YJR060W TPO1Q07824 586 aa5.61□□□□□ -1.51
CBF1YJR060W CTF3Q12748 733 aa5.61□□□□□ -1.51
CBF1YJR060W HSF1P10961 833 aa5.6□□□□□ -1.51
CBF1YJR060W PHO13P19881 312 aa5.6□□□□□ -1.51
CBF1YJR060W URK1P27515 501 aa5.6□□□□□ -1.51
CBF1YJR060W NIP100P33420 868 aa5.6□□□□□ -1.51
CBF1YJR060W NIC96P34077 839 aa5.6□□□□□ -1.51
CBF1YJR060W MIC60P36112 540 aa5.6□□□□□ -1.51
CBF1YJR060W SHE3P38272 425 aaKnown RBP5.6□□□□□ -1.51
CBF1YJR060W VFA1P40080 203 aa5.6□□□□□ -1.51
CBF1YJR060W FMP10P40098 244 aa5.6□□□□□ -1.51
CBF1YJR060W GPP2P40106 250 aaKnown RBP5.6□□□□□ -1.51
CBF1YJR060W RLP7P40693 322 aaKnown RBP5.6□□□□□ -1.51
CBF1YJR060W SHR5P41912 237 aa5.6□□□□□ -1.51
CBF1YJR060W YGR021WP53212 290 aa5.6□□□□□ -1.51
CBF1YJR060W UBX4P54730 416 aa5.6□□□□□ -1.51
CBF1YJR060W SSL2Q00578 843 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms