RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W EBP2P36049 427 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W YHR112CP38716 378 aa3.94□□□□□ -1.78
UBP12YJL197W TIF4631P39935 952 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W ARB1P40024 610 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W PFK26P40433 827 aaKnown RBP3.94□□□□□ -1.78
UBP12YJL197W TLG1Q03322 224 aa3.94□□□□□ -1.78
UBP12YJL197W ATG23Q06671 453 aa3.94□□□□□ -1.78
UBP12YJL197W YDL073WQ07454 984 aa3.94□□□□□ -1.78
UBP12YJL197W TMA16Q08687 178 aa3.94□□□□□ -1.78
UBP12YJL197W CEX1Q12453 761 aa3.94□□□□□ -1.78
UBP12YJL197W RPC40P07703 335 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W THR1P17423 357 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W POT1P27796 417 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
UBP12YJL197W PAP1P29468 568 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W DCG1P32460 244 aa3.93□□□□□ -1.78
UBP12YJL197W YJL206CP39529 758 aa3.93□□□□□ -1.78
UBP12YJL197W FTR1P40088 404 aa3.93□□□□□ -1.78
UBP12YJL197W NOP9P47077 666 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W BNI5P53890 448 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W MTG1Q03151 367 aaPredicted RBP3.93□□□□□ -1.78
UBP12YJL197W GYL1Q04322 720 aa3.93□□□□□ -1.78
UBP12YJL197W THI22Q06490 572 aa3.93□□□□□ -1.78
UBP12YJL197W DIA2Q08496 732 aaPredicted RBP3.93□□□□□ -1.78
UBP12YJL197W TRE1Q08919 783 aa3.93□□□□□ -1.78
UBP12YJL197W CET1O13297 549 aaPredicted RBP3.93□□□□□ -1.78
UBP12YJL197W RPS9BP05755 195 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W VPS33P20795 691 aa3.93□□□□□ -1.78
UBP12YJL197W VPS34P22543 875 aa3.93□□□□□ -1.78
UBP12YJL197W LAS1P36146 502 aaPredicted RBP3.93□□□□□ -1.78
UBP12YJL197W POL12P38121 705 aaPredicted RBP3.93□□□□□ -1.78
UBP12YJL197W ACO2P39533 789 aa3.93□□□□□ -1.78
UBP12YJL197W RTT105P40063 208 aa3.93□□□□□ -1.78
UBP12YJL197W SEC27P41811 889 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W RCM1P53972 490 aa3.93□□□□□ -1.78
UBP12YJL197W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
UBP12YJL197W SKG3Q06315 1026 aa3.93□□□□□ -1.78
UBP12YJL197W SPE3Q12074 293 aaKnown RBP3.93□□□□□ -1.78
UBP12YJL197W SYN8P31377 255 aa3.93□□□□□ -1.78
UBP12YJL197W YEL043WP32618 956 aa3.93□□□□□ -1.78
UBP12YJL197W DAD2P36162 133 aa3.93□□□□□ -1.78
UBP12YJL197W CRG1P38892 291 aaRIP-Chip data3.93□□□□□ -1.78not detected
UBP12YJL197W MDE1P47095 244 aa3.93□□□□□ -1.78
UBP12YJL197W COX18P53239 316 aa3.93□□□□□ -1.78
UBP12YJL197W TOF1P53840 1238 aa3.93□□□□□ -1.78
UBP12YJL197W TCO89Q08921 799 aa3.93□□□□□ -1.78
UBP12YJL197W SWM1Q12379 170 aa3.93□□□□□ -1.78
UBP12YJL197W SEC15P22224 910 aa3.92□□□□□ -1.78
UBP12YJL197W GYP6P32806 458 aa3.92□□□□□ -1.78
UBP12YJL197W GEX2P36173 615 aa3.92□□□□□ -1.78
UBP12YJL197W GDT1P38301 280 aaPredicted RBP3.92□□□□□ -1.78
UBP12YJL197W OYE3P41816 400 aaPredicted RBP3.92□□□□□ -1.78
UBP12YJL197W TCB2P48231 1178 aa3.92□□□□□ -1.78
UBP12YJL197W TIM11P81449 96 aaPredicted RBP3.92□□□□□ -1.78
UBP12YJL197W LUC7Q07508 261 aaPredicted RBP3.92□□□□□ -1.78
UBP12YJL197W RRP36Q12481 300 aaPredicted RBP3.92□□□□□ -1.78
UBP12YJL197W TUB3P09734 445 aaKnown RBP3.92□□□□□ -1.78
UBP12YJL197W MSP1P28737 362 aa3.92□□□□□ -1.78
UBP12YJL197W WHI3P34761 661 aaKnown RBP3.92□□□□□ -1.78
UBP12YJL197W JJJ3P47138 172 aa3.92□□□□□ -1.78
UBP12YJL197W CUL3P53202 744 aa3.92□□□□□ -1.78
UBP12YJL197W SNF12P53628 566 aa3.92□□□□□ -1.78
UBP12YJL197W ERV25P54837 211 aaKnown RBP3.92□□□□□ -1.78
UBP12YJL197W ATG29Q12092 213 aa3.92□□□□□ -1.78
UBP12YJL197W AI3P03877 415 aa3.92□□□□□ -1.78
UBP12YJL197W LTV1P34078 463 aa3.92□□□□□ -1.78
UBP12YJL197W KTR3P38130 404 aaPredicted RBP3.92□□□□□ -1.78
UBP12YJL197W YNG2P38806 282 aaKnown RBP3.92□□□□□ -1.78
UBP12YJL197W YJL193WP39542 402 aa3.92□□□□□ -1.78
UBP12YJL197W LRO1P40345 661 aa3.92□□□□□ -1.78
UBP12YJL197W IDS2P46958 469 aa3.92□□□□□ -1.78
UBP12YJL197W INA17Q02888 182 aa3.92□□□□□ -1.78
UBP12YJL197W YMR111CQ04461 462 aaPredicted RBP3.92□□□□□ -1.78
UBP12YJL197W GAD1Q04792 585 aa3.92□□□□□ -1.78
UBP12YJL197W GTB1Q04924 702 aa3.92□□□□□ -1.78
UBP12YJL197W SWT1Q12104 458 aa3.92□□□□□ -1.78
UBP12YJL197W YML002WP0CF17 737 aa3.91□□□□□ -1.78
UBP12YJL197W CAF20P12962 161 aaKnown RBP3.91□□□□□ -1.78
UBP12YJL197W PEX1P24004 1043 aa3.91□□□□□ -1.78
UBP12YJL197W POL4P25615 582 aa3.91□□□□□ -1.78
UBP12YJL197W DAL80P26343 269 aa3.91□□□□□ -1.78
UBP12YJL197W CDC15P27636 974 aa3.91□□□□□ -1.78
UBP12YJL197W AUR1P36107 401 aaPredicted RBP3.91□□□□□ -1.78
UBP12YJL197W HEL1P36113 551 aa3.91□□□□□ -1.78
UBP12YJL197W YPL272CQ08984 517 aa3.91□□□□□ -1.78
UBP12YJL197W YPT6Q99260 215 aa3.91□□□□□ -1.78
UBP12YJL197W TUP1P16649 713 aa3.91□□□□□ -1.78
UBP12YJL197W LRE1P25579 583 aaKnown RBP3.91□□□□□ -1.78
UBP12YJL197W SIF2P38262 535 aa3.91□□□□□ -1.78
UBP12YJL197W YNL195CP40168 261 aa3.91□□□□□ -1.78
UBP12YJL197W ATF1P40353 525 aa3.91□□□□□ -1.78
UBP12YJL197W MET12P46151 657 aa3.91□□□□□ -1.78
UBP12YJL197W TAM41P53230 385 aa3.91□□□□□ -1.78
UBP12YJL197W GPM3Q12326 303 aa3.91□□□□□ -1.78
UBP12YJL197W SPE4Q12455 300 aa3.91□□□□□ -1.78
UBP12YJL197W PRP4P20053 465 aaKnown RBP3.91□□□□□ -1.78
UBP12YJL197W SRB5P32585 307 aa3.91□□□□□ -1.78
UBP12YJL197W AGP2P38090 596 aa3.91□□□□□ -1.78
UBP12YJL197W REV7P38927 245 aa3.91□□□□□ -1.78
UBP12YJL197W CCT6P39079 546 aa3.91□□□□□ -1.78
UBP12YJL197W BUD16P39988 312 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms