RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeast

Gene CTK2, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTK2	YJL006C	YFL068W	P0CX99	160 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	YLL066W-A	P0CY00	160 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	YLL067W-A	P0CY01	160 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	PET309	P32522	965 aa	Predicted RBP	4.14	□□□□□ -1.75
CTK2	YJL006C	NIC96	P34077	839 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	TGL1	P34163	548 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	PUS4	P48567	403 aa	Known RBP	4.14	□□□□□ -1.75
CTK2	YJL006C	ORC5	P50874	479 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	YNR071C	P53757	342 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	YNL144C	P53907	740 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	GSH2	Q08220	491 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	PSF3	Q12146	194 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	HOS1	Q12214	470 aa		4.14	□□□□□ -1.75
CTK2	YJL006C	SST2	P11972	698 aa	Known RBP	4.13	□□□□□ -1.75
CTK2	YJL006C	PHO3	P24031	467 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	SDS22	P36047	338 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	FMP46	P36141	133 aa	Known RBP	4.13	□□□□□ -1.75
CTK2	YJL006C	SCS2	P40075	244 aa	Known RBP	4.13	□□□□□ -1.75
CTK2	YJL006C	VRG4	P40107	337 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	SAD1	P43589	448 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	IDS2	P46958	469 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	ACS1	Q01574	713 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	YMR317W	Q04893	1140 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	NUR1	Q12066	484 aa		4.13	□□□□□ -1.75
CTK2	YJL006C	SES1	P07284	462 aa	Known RBP	4.12	□□□□□ -1.75
CTK2	YJL006C	ARO9	P38840	513 aa	Predicted RBP	4.12	□□□□□ -1.75
CTK2	YJL006C	SAW1	P39735	261 aa		4.12	□□□□□ -1.75
CTK2	YJL006C	ASK10	P48361	1146 aa		4.12	□□□□□ -1.75
CTK2	YJL006C	YAT1	P80235	687 aa		4.12	□□□□□ -1.75
CTK2	YJL006C	DIG1	Q03063	452 aa	Known RBP	4.12	□□□□□ -1.75
CTK2	YJL006C	TRI1	Q05024	226 aa		4.12	□□□□□ -1.75
CTK2	YJL006C	DBP10	Q12389	995 aa	Known RBP	4.12	□□□□□ -1.75
CTK2	YJL006C	ATP4	P05626	244 aa		4.11	□□□□□ -1.75
CTK2	YJL006C	VAS1	P07806	1104 aa	Known RBP	4.11	□□□□□ -1.75
CTK2	YJL006C	RPL42A	P0CX27	106 aa	Known RBP	4.11	□□□□□ -1.75
CTK2	YJL006C	RPL42B	P0CX28	106 aa	Known RBP	4.11	□□□□□ -1.75
CTK2	YJL006C	YKL133C	P36066	463 aa		4.11	□□□□□ -1.75
CTK2	YJL006C	TAF5	P38129	798 aa		4.11	□□□□□ -1.75
CTK2	YJL006C	HOS2	P53096	452 aa	Predicted RBP	4.11	□□□□□ -1.75
CTK2	YJL006C	CEG1	Q01159	459 aa	Predicted RBP	4.11	□□□□□ -1.75
CTK2	YJL006C	IOC4	Q04213	475 aa		4.11	□□□□□ -1.75
CTK2	YJL006C	YER175W-A	Q8TGU4	54 aa		4.11	□□□□□ -1.75
CTK2	YJL006C	GAL1	P04385	528 aa		4.1	□□□□□ -1.75
CTK2	YJL006C	KGD2	P19262	463 aa	Predicted RBP	4.1	□□□□□ -1.75
CTK2	YJL006C	ARN1	P38731	627 aa		4.1	□□□□□ -1.75
CTK2	YJL006C	GSM1	P42950	618 aa		4.1	□□□□□ -1.75
CTK2	YJL006C	MET14	Q02196	202 aa		4.1	□□□□□ -1.75
CTK2	YJL006C	ADH4	P10127	382 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	PPZ1	P26570	692 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	GSH1	P32477	678 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	VBA2	P38358	474 aa	Known RBP	4.09	□□□□□ -1.75
CTK2	YJL006C	BET4	Q00618	327 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	ECM16	Q04217	1267 aa	Known RBP	4.09	□□□□□ -1.75
CTK2	YJL006C	RTT103	Q05543	409 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	YOL057W	Q08225	711 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	ARP7	Q12406	477 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	YMR230W-A	Q3E7B5	62 aa		4.09	□□□□□ -1.75
CTK2	YJL006C	ILV2	P07342	687 aa	Known RBP	4.08	□□□□□ -1.76
CTK2	YJL006C	PRP45	P28004	379 aa	Predicted RBP	4.08	□□□□□ -1.76
CTK2	YJL006C	PTP2	P29461	750 aa		4.08	□□□□□ -1.76
CTK2	YJL006C	YLF2	P38746	405 aa		4.08	□□□□□ -1.76
CTK2	YJL006C	SWD1	P39706	426 aa		4.08	□□□□□ -1.76
CTK2	YJL006C	UBP7	P40453	1071 aa		4.08	□□□□□ -1.76
CTK2	YJL006C	MLC2	Q06580	163 aa		4.08	□□□□□ -1.76
CTK2	YJL006C	YOL114C	Q12322	202 aa		4.08	□□□□□ -1.76
CTK2	YJL006C	YCR061W	P25639	631 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	MSS51	P32335	436 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	HIS6	P40545	261 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	IMA5	P40884	581 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	SKP2	P42843	763 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	TEP1	P53916	434 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	CRD1	Q07560	283 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	YPL191C	Q08930	360 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	NYV1	Q12255	253 aa		4.07	□□□□□ -1.76
CTK2	YJL006C	PTC6	P25646	442 aa		4.06	□□□□□ -1.76
CTK2	YJL006C	PRE2	P30656	287 aa	Known RBP	4.06	□□□□□ -1.76
CTK2	YJL006C	SDS24	P38314	527 aa		4.06	□□□□□ -1.76
CTK2	YJL006C	YND1	P40009	630 aa		4.06	□□□□□ -1.76
CTK2	YJL006C	VFA1	P40080	203 aa		4.06	□□□□□ -1.76
CTK2	YJL006C	AAD4	Q07747	329 aa		4.06	□□□□□ -1.76
CTK2	YJL006C	RRP6	Q12149	733 aa	Known RBP	4.06	□□□□□ -1.76
CTK2	YJL006C	YOX1	P34161	385 aa		4.05	□□□□□ -1.76
CTK2	YJL006C	RKM3	P38222	552 aa		4.05	□□□□□ -1.76
CTK2	YJL006C	QRI7	P43122	407 aa		4.05	□□□□□ -1.76
CTK2	YJL006C	POL31	P46957	487 aa		4.05	□□□□□ -1.76
CTK2	YJL006C	MAD3	P47074	515 aa		4.05	□□□□□ -1.76
CTK2	YJL006C	TAN1	P53072	289 aa	Predicted RBP	4.05	□□□□□ -1.76
CTK2	YJL006C	TRS31	Q03337	283 aa		4.05	□□□□□ -1.76
CTK2	YJL006C	YLR281C	Q05863	155 aa		4.05	□□□□□ -1.76
CTK2	YJL006C	MSS18	P08593	268 aa		4.04	□□□□□ -1.76
CTK2	YJL006C	RPF2	P36160	344 aa	Known RBP	4.04	□□□□□ -1.76
CTK2	YJL006C	YJR008W	P47085	338 aa		4.04	□□□□□ -1.76
CTK2	YJL006C	CRF1	Q04930	467 aa		4.04	□□□□□ -1.76
CTK2	YJL006C	BRE1	Q07457	700 aa	Known RBP	4.04	□□□□□ -1.76
CTK2	YJL006C	CTT1	P06115	562 aa		4.03	□□□□□ -1.76
CTK2	YJL006C	YHL041W	P38730	149 aa		4.03	□□□□□ -1.76
CTK2	YJL006C	PCL6	P40038	420 aa		4.03	□□□□□ -1.76
CTK2	YJL006C	VPS25	P47142	202 aa		4.03	□□□□□ -1.76
CTK2	YJL006C	FMP42	Q04991	504 aa		4.03	□□□□□ -1.76
CTK2	YJL006C	PDR8	Q06149	701 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms