RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C SWT1Q12104 458 aa5.88□□□□□ -1.47
YIR043CYIR043C HUA2Q12134 243 aa5.88□□□□□ -1.47
YIR043CYIR043C MDM20Q12387 796 aaKnown RBP5.88□□□□□ -1.47
YIR043CYIR043C YBR255C-AQ3E776 120 aa5.88□□□□□ -1.47
YIR043CYIR043C FOB1O13329 566 aa5.87□□□□□ -1.47
YIR043CYIR043C RPB2P08518 1224 aaKnown RBP5.87□□□□□ -1.47
YIR043CYIR043C KTR3P38130 404 aaPredicted RBP5.87□□□□□ -1.47
YIR043CYIR043C YPT10P38146 199 aa5.87□□□□□ -1.47
YIR043CYIR043C TDP1P38319 544 aa5.87□□□□□ -1.47
YIR043CYIR043C YJL206CP39529 758 aa5.87□□□□□ -1.47
YIR043CYIR043C BUD16P39988 312 aa5.87□□□□□ -1.47
YIR043CYIR043C FMP10P40098 244 aa5.87□□□□□ -1.47
YIR043CYIR043C DUO1P53168 247 aaKnown RBP5.87□□□□□ -1.47
YIR043CYIR043C YGR079WP53249 370 aa5.87□□□□□ -1.47
YIR043CYIR043C YKU80Q04437 629 aa5.87□□□□□ -1.47
YIR043CYIR043C VCX1Q99385 411 aa5.87□□□□□ -1.47
YIR043CYIR043C AAC1P04710 309 aa5.86□□□□□ -1.47
YIR043CYIR043C PRE8P23639 250 aa5.86□□□□□ -1.47
YIR043CYIR043C SIP1P32578 815 aa5.86□□□□□ -1.47
YIR043CYIR043C ALY1P36117 915 aa5.86□□□□□ -1.47
YIR043CYIR043C TIM10P87108 93 aa5.86□□□□□ -1.47
YIR043CYIR043C YSA1Q01976 231 aa5.86□□□□□ -1.47
YIR043CYIR043C UBP16Q02863 499 aa5.86□□□□□ -1.47
YIR043CYIR043C YML119WQ03208 357 aa5.86□□□□□ -1.47
YIR043CYIR043C TDA9Q04545 1251 aa5.86□□□□□ -1.47
YIR043CYIR043C GTB1Q04924 702 aa5.86□□□□□ -1.47
YIR043CYIR043C HBT1Q07653 1046 aaKnown RBP5.86□□□□□ -1.47
YIR043CYIR043C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
YIR043CYIR043C ACF2Q12168 779 aa5.86□□□□□ -1.47
YIR043CYIR043C TAH18Q12181 623 aa5.86□□□□□ -1.47
YIR043CYIR043C YBR126W-AQ8TGU7 68 aa5.86□□□□□ -1.47
YIR043CYIR043C YML003WP0CF16 290 aa5.85□□□□□ -1.47
YIR043CYIR043C LRE1P25579 583 aaKnown RBP5.85□□□□□ -1.47
YIR043CYIR043C BDH2P39713 417 aa5.85□□□□□ -1.47
YIR043CYIR043C YNL092WP53934 400 aa5.85□□□□□ -1.47
YIR043CYIR043C SPC19Q03954 165 aa5.85□□□□□ -1.47
YIR043CYIR043C RAD30Q04049 632 aa5.85□□□□□ -1.47
YIR043CYIR043C ATG23Q06671 453 aa5.85□□□□□ -1.47
YIR043CYIR043C PSK2Q08217 1101 aa5.85□□□□□ -1.47
YIR043CYIR043C CRT10Q08226 957 aa5.85□□□□□ -1.47
YIR043CYIR043C PRS5Q12265 496 aaKnown RBP5.85□□□□□ -1.47
YIR043CYIR043C ZPS1Q12512 249 aa5.85□□□□□ -1.47
YIR043CYIR043C SUI3P09064 285 aaKnown RBP5.84□□□□□ -1.47
YIR043CYIR043C RPL19AP0CX82 189 aaKnown RBP5.84□□□□□ -1.47
YIR043CYIR043C RPL19BP0CX83 189 aaPredicted RBP5.84□□□□□ -1.47
YIR043CYIR043C AMD2P22580 549 aa5.84□□□□□ -1.47
YIR043CYIR043C SGF29P25554 259 aa5.84□□□□□ -1.47
YIR043CYIR043C GEX2P36173 615 aa5.84□□□□□ -1.47
YIR043CYIR043C NOP4P37838 685 aaKnown RBP5.84□□□□□ -1.47
YIR043CYIR043C FUN12P39730 1002 aaKnown RBP5.84□□□□□ -1.47
YIR043CYIR043C GIP4P39732 760 aa5.84□□□□□ -1.47
YIR043CYIR043C MAM1P40065 302 aa5.84□□□□□ -1.47
YIR043CYIR043C CCT7P42943 550 aaKnown RBP5.84□□□□□ -1.47
YIR043CYIR043C MSE1P48525 536 aa5.84□□□□□ -1.47
YIR043CYIR043C STB4P50104 949 aa5.84□□□□□ -1.47
YIR043CYIR043C MRPL19P53875 158 aa5.84□□□□□ -1.47
YIR043CYIR043C YML053CQ04978 212 aa5.84□□□□□ -1.47
YIR043CYIR043C YDL242WQ07746 117 aa5.84□□□□□ -1.47
YIR043CYIR043C ERP4Q12450 207 aa5.84□□□□□ -1.47
YIR043CYIR043C COX1P00401 534 aa5.83□□□□□ -1.48
YIR043CYIR043C SEC53P07283 254 aaKnown RBP5.83□□□□□ -1.48
YIR043CYIR043C WHI2P12611 486 aa5.83□□□□□ -1.48
YIR043CYIR043C RNR3P21672 869 aaKnown RBP5.83□□□□□ -1.48
YIR043CYIR043C RFA2P26754 273 aaKnown RBP5.83□□□□□ -1.48
YIR043CYIR043C SAC6P32599 642 aaKnown RBP5.83□□□□□ -1.48
YIR043CYIR043C TFC3P34111 1160 aa5.83□□□□□ -1.48
YIR043CYIR043C RPF2P36160 344 aaKnown RBP5.83□□□□□ -1.48
YIR043CYIR043C YBL029WP38201 376 aa5.83□□□□□ -1.48
YIR043CYIR043C YBR225WP38321 900 aa5.83□□□□□ -1.48
YIR043CYIR043C UBP7P40453 1071 aa5.83□□□□□ -1.48
YIR043CYIR043C UBX6P47049 396 aa5.83□□□□□ -1.48
YIR043CYIR043C COQ6P53318 479 aa5.83□□□□□ -1.48
YIR043CYIR043C NRD1P53617 575 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
YIR043CYIR043C TIM44Q01852 431 aa5.83□□□□□ -1.48
YIR043CYIR043C GFD1Q04839 188 aaKnown RBP5.83□□□□□ -1.48
YIR043CYIR043C MFB1Q04922 465 aa5.83□□□□□ -1.48
YIR043CYIR043C MRI1Q06489 411 aaKnown RBP5.83□□□□□ -1.48
YIR043CYIR043C YOR019WQ99248 730 aa5.83□□□□□ -1.48
YIR043CYIR043C AI5_ALPHAQ9ZZX1 630 aa5.83□□□□□ -1.48
YIR043CYIR043C CHO2P05374 869 aaKnown RBP5.82□□□□□ -1.48
YIR043CYIR043C OLE1P21147 510 aaKnown RBP5.82□□□□□ -1.48
YIR043CYIR043C YCK1P23291 538 aa5.82□□□□□ -1.48
YIR043CYIR043C PGS1P25578 521 aa5.82□□□□□ -1.48
YIR043CYIR043C MRPL9P31334 269 aa5.82□□□□□ -1.48
YIR043CYIR043C GDA1P32621 518 aa5.82□□□□□ -1.48
YIR043CYIR043C YMC2P38087 329 aa5.82□□□□□ -1.48
YIR043CYIR043C MIT1P40002 666 aa5.82□□□□□ -1.48
YIR043CYIR043C LAS21P40367 830 aa5.82□□□□□ -1.48
YIR043CYIR043C AAD10P47182 288 aa5.82□□□□□ -1.48
YIR043CYIR043C FCP1Q03254 732 aa5.82□□□□□ -1.48
YIR043CYIR043C LYS21Q12122 440 aaKnown RBP5.82□□□□□ -1.48
YIR043CYIR043C CPA2P03965 1118 aaKnown RBP5.81□□□□□ -1.48
YIR043CYIR043C KGD2P19262 463 aaPredicted RBP5.81□□□□□ -1.48
YIR043CYIR043C KIN3P22209 435 aa5.81□□□□□ -1.48
YIR043CYIR043C SRB5P32585 307 aa5.81□□□□□ -1.48
YIR043CYIR043C ERC1P38767 581 aa5.81□□□□□ -1.48
YIR043CYIR043C RTS1P38903 757 aa5.81□□□□□ -1.48
YIR043CYIR043C SLZ1P40167 298 aa5.81□□□□□ -1.48
YIR043CYIR043C DJP1P40564 432 aa5.81□□□□□ -1.48
YIR043CYIR043C VTC2P43585 828 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms