RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	GLO1	P50107	326 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	STP1	Q00947	519 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	MTG1	Q03151	367 aa	Predicted RBP	3.42	□□□□□ -1.86
VHR1	YIL056W	BLS1	Q06071	122 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	YPL191C	Q08930	360 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	PRS5	Q12265	496 aa	Known RBP	3.42	□□□□□ -1.86
VHR1	YIL056W	YBR255C-A	Q3E776	120 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	COX1	P00401	534 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.42	□□□□□ -1.86	not detected
VHR1	YIL056W	FTH1	P38310	465 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	FSH1	P38777	243 aa	Known RBP	3.42	□□□□□ -1.86
VHR1	YIL056W	ACA1	P39970	489 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	IRC7	P43623	340 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	NMD5	P46970	1048 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	YGR079W	P53249	370 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	TRS130	Q03660	1102 aa		3.42	□□□□□ -1.86
VHR1	YIL056W	SUI3	P09064	285 aa	Known RBP	3.41	□□□□□ -1.86
VHR1	YIL056W	KGD2	P19262	463 aa	Predicted RBP	3.41	□□□□□ -1.86
VHR1	YIL056W	LAC1	P28496	418 aa		3.41	□□□□□ -1.86
VHR1	YIL056W	FRD1	P32614	470 aa	Known RBP	3.41	□□□□□ -1.86
VHR1	YIL056W	MRS6	P32864	603 aa	Known RBP	3.41	□□□□□ -1.86
VHR1	YIL056W	YIL161W	P40449	235 aa	Known RBP	3.41	□□□□□ -1.86
VHR1	YIL056W	IDP3	P53982	420 aa	Known RBP	3.41	□□□□□ -1.86
VHR1	YIL056W	SPN1	Q06505	410 aa	Predicted RBP	3.41	□□□□□ -1.86
VHR1	YIL056W	FRE7	Q12333	620 aa		3.41	□□□□□ -1.86
VHR1	YIL056W	MBR1	P23493	339 aa		3.4	□□□□□ -1.86
VHR1	YIL056W	KES1	P35844	434 aa	Known RBP	3.4	□□□□□ -1.86
VHR1	YIL056W	SCO2	P38072	301 aa		3.4	□□□□□ -1.86
VHR1	YIL056W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.86	not detected
VHR1	YIL056W	VPS8	P39702	1274 aa		3.4	□□□□□ -1.86
VHR1	YIL056W	PUG1	P40100	303 aa		3.4	□□□□□ -1.86
VHR1	YIL056W	NPA3	P47122	385 aa		3.4	□□□□□ -1.86
VHR1	YIL056W	YAT1	P80235	687 aa		3.4	□□□□□ -1.86
VHR1	YIL056W	SEC5	P89102	971 aa		3.4	□□□□□ -1.86
VHR1	YIL056W	MSM1	P22438	575 aa		3.4	□□□□□ -1.87
VHR1	YIL056W	PTC6	P25646	442 aa		3.4	□□□□□ -1.87
VHR1	YIL056W	ERC1	P38767	581 aa		3.4	□□□□□ -1.87
VHR1	YIL056W	JHD1	P40034	492 aa		3.4	□□□□□ -1.87
VHR1	YIL056W	BNA3	P47039	444 aa	Known RBP	3.4	□□□□□ -1.87
VHR1	YIL056W	MRPL13	Q02204	264 aa		3.4	□□□□□ -1.87
VHR1	YIL056W	SUL2	Q12325	893 aa		3.4	□□□□□ -1.87
VHR1	YIL056W	TPK1	P06244	397 aa		3.39	□□□□□ -1.87
VHR1	YIL056W	UME6	P39001	836 aa		3.39	□□□□□ -1.87
VHR1	YIL056W	BST1	P43571	1029 aa		3.39	□□□□□ -1.87
VHR1	YIL056W	TAM41	P53230	385 aa		3.39	□□□□□ -1.87
VHR1	YIL056W	RSC9	Q03124	581 aa		3.39	□□□□□ -1.87
VHR1	YIL056W	YLR111W	Q12528	110 aa		3.39	□□□□□ -1.87
VHR1	YIL056W	ATP2	P00830	511 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	APA1	P16550	321 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	YAP1	P19880	650 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	URK1	P27515	501 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	YBR138C	P38277	524 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	IMD2	P38697	523 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	SMK1	P41808	388 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	IMD3	P50095	523 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	IMA1	P53051	589 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	STP3	Q05937	343 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	THI3	Q07471	609 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	LEA1	Q08963	238 aa	Predicted RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	COX17	Q12287	69 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	CRC1	Q12289	327 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	SES1	P07284	462 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	YMR085W	P0CF18	432 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	COQ3	P27680	312 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	DBF20	P32328	564 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	ERR3	P42222	437 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	ORC5	P50874	479 aa		3.38	□□□□□ -1.87
VHR1	YIL056W	EIS1	Q05050	843 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	LYS21	Q12122	440 aa	Known RBP	3.38	□□□□□ -1.87
VHR1	YIL056W	SSM4	P40318	1319 aa		3.37	□□□□□ -1.87
VHR1	YIL056W	CET1	O13297	549 aa	Predicted RBP	3.37	□□□□□ -1.87
VHR1	YIL056W	FLO5	P38894	1075 aa		3.37	□□□□□ -1.87
VHR1	YIL056W	DJP1	P40564	432 aa		3.37	□□□□□ -1.87
VHR1	YIL056W	CIN1	P40987	1014 aa		3.37	□□□□□ -1.87
VHR1	YIL056W	YNL144C	P53907	740 aa		3.37	□□□□□ -1.87
VHR1	YIL056W	ATG16	Q03818	150 aa		3.37	□□□□□ -1.87
VHR1	YIL056W	SWT1	Q12104	458 aa		3.37	□□□□□ -1.87
VHR1	YIL056W	SPO16	P17122	198 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	RFA2	P26754	273 aa	Known RBP	3.36	□□□□□ -1.87
VHR1	YIL056W	GAT1	P43574	510 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	GTB1	Q04924	702 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	YAP7	Q08182	245 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	Q0010	Q9ZZX9	128 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	HES1	P35843	434 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	TEF4	P36008	412 aa	Known RBP	3.36	□□□□□ -1.87
VHR1	YIL056W	NPR3	P38742	1146 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	ASG1	P40467	964 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	YIL024C	P40543	189 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	MNT3	P40549	630 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	SAP185	P40856	1058 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	FCP1	Q03254	732 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	ECM22	Q05958	814 aa	Predicted RBP	3.36	□□□□□ -1.87
VHR1	YIL056W	RAD34	Q06665	692 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	ATG23	Q06671	453 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	YLR049C	Q12110	428 aa		3.36	□□□□□ -1.87
VHR1	YIL056W	ERG27	Q12452	347 aa	Known RBP	3.36	□□□□□ -1.87
VHR1	YIL056W	RPT3	P33298	428 aa	Known RBP	3.35	□□□□□ -1.87
VHR1	YIL056W	CNS1	P33313	385 aa		3.35	□□□□□ -1.87
VHR1	YIL056W	IML2	P47031	731 aa		3.35	□□□□□ -1.87
VHR1	YIL056W	COG1	P53079	417 aa		3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 133.7 ms