RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C IST3P40565 148 aaPredicted RBP13.48□□□□□ -0.25
SHU1YHL006C NBP35P52920 328 aa13.48□□□□□ -0.25
SHU1YHL006C YPL113CQ02961 396 aa13.48□□□□□ -0.25
SHU1YHL006C ATG10Q07879 167 aa13.48□□□□□ -0.25
SHU1YHL006C RTK1Q12100 620 aaPredicted RBP13.48□□□□□ -0.25
SHU1YHL006C YEL077CQ3E7X8 1277 aa13.48□□□□□ -0.25
SHU1YHL006C AI5_ALPHAQ9ZZX1 630 aa13.48□□□□□ -0.25
SHU1YHL006C CIN8P27895 1000 aa13.47□□□□□ -0.25
SHU1YHL006C BRF1P29056 596 aa13.47□□□□□ -0.25
SHU1YHL006C STO1P34160 861 aaKnown RBP13.47□□□□□ -0.25
SHU1YHL006C YJL070CP40361 888 aa13.47□□□□□ -0.25
SHU1YHL006C SET2P46995 733 aaKnown RBP13.47□□□□□ -0.25
SHU1YHL006C STR3P53101 465 aaKnown RBP13.47□□□□□ -0.25
SHU1YHL006C YFT2Q06676 274 aa13.47□□□□□ -0.25
SHU1YHL006C NRT1Q08485 598 aa13.47□□□□□ -0.25
SHU1YHL006C YLL056CQ12177 298 aa13.47□□□□□ -0.25
SHU1YHL006C PMI40P29952 429 aaKnown RBP13.46□□□□□ -0.25
SHU1YHL006C RAD5P32849 1169 aaPredicted RBP13.46□□□□□ -0.25
SHU1YHL006C SCD5P34758 872 aa13.46□□□□□ -0.25
SHU1YHL006C YAT2P40017 923 aa13.46□□□□□ -0.25
SHU1YHL006C MND2P40577 368 aa13.46□□□□□ -0.25
SHU1YHL006C SPC105P53148 917 aa13.46□□□□□ -0.25
SHU1YHL006C TEP1P53916 434 aa13.46□□□□□ -0.25
SHU1YHL006C YDR131CQ03899 556 aa13.46□□□□□ -0.25
SHU1YHL006C PPN1Q04119 674 aa13.46□□□□□ -0.25
SHU1YHL006C NUM1Q00402 2748 aa13.45□□□□□ -0.26
SHU1YHL006C SNF5P18480 905 aa13.45□□□□□ -0.26
SHU1YHL006C UTR2P32623 467 aa13.45□□□□□ -0.26
SHU1YHL006C YKL151CP36059 337 aa13.45□□□□□ -0.26
SHU1YHL006C END3P39013 349 aa13.45□□□□□ -0.26
SHU1YHL006C SUM1P46676 1062 aa13.45□□□□□ -0.26
SHU1YHL006C BUD13P46947 266 aaPredicted RBP13.45□□□□□ -0.26
SHU1YHL006C SIP4P46954 829 aa13.45□□□□□ -0.26
SHU1YHL006C CSN12P47130 423 aa13.45□□□□□ -0.26
SHU1YHL006C SWS2P53937 143 aa13.45□□□□□ -0.26
SHU1YHL006C LDB18Q07887 179 aa13.45□□□□□ -0.26
SHU1YHL006C SUC2P00724 532 aa13.44□□□□□ -0.26
SHU1YHL006C SPT15P13393 240 aaKnown RBP13.44□□□□□ -0.26
SHU1YHL006C ACO1P19414 778 aaKnown RBP RIP-Chip data13.44□□□□□ -0.26not detected
SHU1YHL006C EBP2P36049 427 aaKnown RBP13.44□□□□□ -0.26
SHU1YHL006C YAT1P80235 687 aa13.44□□□□□ -0.26
SHU1YHL006C YMR114CQ04471 368 aaKnown RBP13.44□□□□□ -0.26
SHU1YHL006C FAP7Q12055 197 aaPredicted RBP13.44□□□□□ -0.26
SHU1YHL006C POL2P21951 2222 aaKnown RBP13.43□□□□□ -0.26
SHU1YHL006C CKI1P20485 582 aa13.43□□□□□ -0.26
SHU1YHL006C TFA2P36145 328 aa13.43□□□□□ -0.26
SHU1YHL006C ECM2P38241 364 aaKnown RBP13.43□□□□□ -0.26
SHU1YHL006C YBP1P38315 674 aa13.43□□□□□ -0.26
SHU1YHL006C OCA5P38738 679 aa13.43□□□□□ -0.26
SHU1YHL006C DSN1P40568 576 aa13.43□□□□□ -0.26
SHU1YHL006C SUN4P53616 420 aa13.43□□□□□ -0.26
SHU1YHL006C TRM82Q03774 444 aa13.43□□□□□ -0.26
SHU1YHL006C YOR338WQ99326 363 aa13.43□□□□□ -0.26
SHU1YHL006C DCC1P25559 380 aa13.42□□□□□ -0.26
SHU1YHL006C SRB4P32569 687 aa13.42□□□□□ -0.26
SHU1YHL006C RRP3P38712 501 aaKnown RBP13.42□□□□□ -0.26
SHU1YHL006C LTP1P40347 161 aa13.42□□□□□ -0.26
SHU1YHL006C RPL34BP40525 121 aaKnown RBP13.42□□□□□ -0.26
SHU1YHL006C IML2P47031 731 aa13.42□□□□□ -0.26
SHU1YHL006C CDC14Q00684 551 aa13.42□□□□□ -0.26
SHU1YHL006C CLN1P20437 546 aa13.41□□□□□ -0.26
SHU1YHL006C ERG6P25087 383 aaKnown RBP13.41□□□□□ -0.26
SHU1YHL006C AEP1P32493 518 aa13.41□□□□□ -0.26
SHU1YHL006C LRP1P38801 184 aaKnown RBP13.41□□□□□ -0.26
SHU1YHL006C RGD2P43556 714 aa13.41□□□□□ -0.26
SHU1YHL006C COG1P53079 417 aa13.41□□□□□ -0.26
SHU1YHL006C SIW14P53965 281 aa13.41□□□□□ -0.26
SHU1YHL006C RTT10Q08924 1013 aa13.41□□□□□ -0.26
SHU1YHL006C SRO7Q12038 1033 aa13.41□□□□□ -0.26
SHU1YHL006C SLD2P34252 453 aa13.4□□□□□ -0.26
SHU1YHL006C MSR1P38714 643 aa13.4□□□□□ -0.26
SHU1YHL006C CKB2P38930 258 aa13.4□□□□□ -0.26
SHU1YHL006C YIL108WP40483 696 aaKnown RBP13.4□□□□□ -0.26
SHU1YHL006C TES1P41903 349 aaKnown RBP13.4□□□□□ -0.26
SHU1YHL006C BOP3P53958 396 aa13.4□□□□□ -0.26
SHU1YHL006C VAC14Q06708 880 aa13.4□□□□□ -0.26
SHU1YHL006C POL30P15873 258 aaKnown RBP13.39□□□□□ -0.27
SHU1YHL006C GAL11P19659 1081 aa13.39□□□□□ -0.27
SHU1YHL006C MFT1P33441 392 aaKnown RBP13.39□□□□□ -0.27
SHU1YHL006C PHO11P35842 467 aa13.39□□□□□ -0.27
SHU1YHL006C PHO12P38693 467 aa13.39□□□□□ -0.27
SHU1YHL006C YMR134WP40207 237 aa13.39□□□□□ -0.27
SHU1YHL006C HLJ1P48353 224 aa13.39□□□□□ -0.27
SHU1YHL006C RPN8Q08723 338 aaKnown RBP13.39□□□□□ -0.27
SHU1YHL006C YLR149CQ99296 730 aa13.39□□□□□ -0.27
SHU1YHL006C TRM1P15565 570 aaKnown RBP13.38□□□□□ -0.27
SHU1YHL006C ERV46P39727 415 aa13.38□□□□□ -0.27
SHU1YHL006C CIS3P47001 227 aa13.38□□□□□ -0.27
SHU1YHL006C SAP4P53036 818 aa13.38□□□□□ -0.27
SHU1YHL006C PCL10P53124 433 aa13.38□□□□□ -0.27
SHU1YHL006C RIM8P53179 542 aa13.38□□□□□ -0.27
SHU1YHL006C SWC4P53201 476 aa13.38□□□□□ -0.27
SHU1YHL006C YNL143CP53908 130 aa13.38□□□□□ -0.27
SHU1YHL006C MET14Q02196 202 aa13.38□□□□□ -0.27
SHU1YHL006C RSC4Q02206 625 aa13.38□□□□□ -0.27
SHU1YHL006C YDR132CQ03900 495 aa13.38□□□□□ -0.27
SHU1YHL006C YKR104WP0CE69 306 aa13.37□□□□□ -0.27
SHU1YHL006C PUF4P25339 888 aaKnown RBP RIP-Chip data13.37□□□□□ -0.27not detected
SHU1YHL006C DUG1P43616 481 aaKnown RBP13.37□□□□□ -0.27
SHU1YHL006C NUP100Q02629 959 aa13.37□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms