RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	YKL050C	P35736	922 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	RMA1	P36001	430 aa	Known RBP	3.57	□□□□□ -1.84
YGR039W	YGR039W	APE4	P38821	490 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	NPR2	P39923	615 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	PRM2	P40534	656 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	BST1	P43571	1029 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	RMD8	P43620	662 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	YGR250C	P53316	781 aa	Known RBP	3.57	□□□□□ -1.84
YGR039W	YGR039W	ACS1	Q01574	713 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	VBA4	Q04602	768 aa	Known RBP	3.57	□□□□□ -1.84
YGR039W	YGR039W	ARG7	Q04728	441 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	YLR287C	Q05881	355 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	UTP21	Q06078	939 aa	Predicted RBP	3.57	□□□□□ -1.84
YGR039W	YGR039W	YLR352W	Q06479	807 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	RGT2	Q12300	763 aa		3.57	□□□□□ -1.84
YGR039W	YGR039W	RPS9B	P05755	195 aa	Known RBP	3.56	□□□□□ -1.84
YGR039W	YGR039W	SGF29	P25554	259 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	PRP45	P28004	379 aa	Predicted RBP	3.56	□□□□□ -1.84
YGR039W	YGR039W	HOT13	P36078	116 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	CDS1	P38221	457 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	YBR225W	P38321	900 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	FSH1	P38777	243 aa	Known RBP	3.56	□□□□□ -1.84
YGR039W	YGR039W	FMP10	P40098	244 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	GPD2	P41911	440 aa	Known RBP	3.56	□□□□□ -1.84
YGR039W	YGR039W	YDL183C	P48569	320 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	YGL117W	P53133	265 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	CPR8	P53728	308 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	DAK1	P54838	584 aa	Known RBP	3.56	□□□□□ -1.84
YGR039W	YGR039W	MFB1	Q04922	465 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	CRD1	Q07560	283 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	RRG1	Q12167	365 aa	Predicted RBP	3.56	□□□□□ -1.84
YGR039W	YGR039W	TAH18	Q12181	623 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	HIF1	Q12373	385 aa		3.56	□□□□□ -1.84
YGR039W	YGR039W	RPL19A	P0CX82	189 aa	Known RBP	3.55	□□□□□ -1.84
YGR039W	YGR039W	RPL19B	P0CX83	189 aa	Predicted RBP	3.55	□□□□□ -1.84
YGR039W	YGR039W	STE4	P18851	423 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	RPC53	P25441	422 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	TEF4	P36008	412 aa	Known RBP	3.55	□□□□□ -1.84
YGR039W	YGR039W	ELF1	P36053	145 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	ESL2	P36168	1195 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	UME6	P39001	836 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	LSM5	P40089	93 aa	Known RBP	3.55	□□□□□ -1.84
YGR039W	YGR039W	LYS14	P40971	790 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	PXA1	P41909	870 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	GSM1	P42950	618 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	SIP4	P46954	829 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	SPO1	P53541	631 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	PPN1	Q04119	674 aa		3.55	□□□□□ -1.84
YGR039W	YGR039W	FUR1	P18562	216 aa	Known RBP	3.54	□□□□□ -1.84
YGR039W	YGR039W	PRP22	P24384	1145 aa	Known RBP	3.54	□□□□□ -1.84
YGR039W	YGR039W	SAC6	P32599	642 aa	Known RBP	3.54	□□□□□ -1.84
YGR039W	YGR039W	PEX5	P35056	612 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	MUM2	P38236	366 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	ULP2	P40537	1034 aa	Predicted RBP	3.54	□□□□□ -1.84
YGR039W	YGR039W	AXL1	P40851	1208 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	POL31	P46957	487 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	SQS1	P53866	767 aa	Known RBP	3.54	□□□□□ -1.84
YGR039W	YGR039W	TRS31	Q03337	283 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	SYF1	Q04048	859 aa	Predicted RBP	3.54	□□□□□ -1.84
YGR039W	YGR039W	YCG1	Q06680	1035 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	PSR1	Q07800	427 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	HOS1	Q12214	470 aa		3.54	□□□□□ -1.84
YGR039W	YGR039W	RPB2	P08518	1224 aa	Known RBP	3.53	□□□□□ -1.84
YGR039W	YGR039W	PCK1	P10963	549 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	RED1	P14291	827 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	TPM1	P17536	199 aa	Known RBP	3.53	□□□□□ -1.84
YGR039W	YGR039W	AAD3	P25612	363 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	ERG3	P32353	365 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	CNS1	P33313	385 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	MRPL36	P36531	177 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	LRP1	P38801	184 aa	Known RBP	3.53	□□□□□ -1.84
YGR039W	YGR039W	CRG1	P38892	291 aa	RIP-Chip data	3.53	□□□□□ -1.84	not detected
YGR039W	YGR039W	YJR061W	P40355	935 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	CAB2	P40506	365 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	YML6	P51998	286 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	DUO1	P53168	247 aa	Known RBP	3.53	□□□□□ -1.84
YGR039W	YGR039W	BSC5	P53755	489 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	CSL4	P53859	292 aa	Predicted RBP	3.53	□□□□□ -1.84
YGR039W	YGR039W	MPS1	P54199	764 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	MEH1	Q02205	184 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	YPL071C	Q02864	156 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	RCF1	Q03713	159 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	VAM6	Q07468	1049 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	PSK2	Q08217	1101 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	CIR2	Q08822	631 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	ICL2	Q12031	575 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	COX17	Q12287	69 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	AI5_ALPHA	Q9ZZX1	630 aa		3.53	□□□□□ -1.84
YGR039W	YGR039W	ARG3	P05150	338 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	TPK1	P06244	397 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	CKA1	P15790	372 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	TUP1	P16649	713 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	MRP20	P32387	263 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	FTR1	P40088	404 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	ARC1	P46672	376 aa	Known RBP	3.52	□□□□□ -1.85
YGR039W	YGR039W	VPS75	P53853	264 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	YSA1	Q01976	231 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	TIM50	Q02776	476 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	TRS23	Q03784	219 aa		3.52	□□□□□ -1.85
YGR039W	YGR039W	YDR131C	Q03899	556 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms