RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W CLB4P24871 460 aa3.71□□□□□ -1.82
LOC1YFR001W URK1P27515 501 aa3.71□□□□□ -1.82
LOC1YFR001W SWC3P31376 625 aa3.71□□□□□ -1.82
LOC1YFR001W FTH1P38310 465 aa3.71□□□□□ -1.82
LOC1YFR001W FSH1P38777 243 aaKnown RBP3.71□□□□□ -1.82
LOC1YFR001W TPM2P40414 161 aa3.71□□□□□ -1.82
LOC1YFR001W SNO3P43544 222 aa3.71□□□□□ -1.82
LOC1YFR001W NET1P47035 1189 aa3.71□□□□□ -1.82
LOC1YFR001W NPA3P47122 385 aa3.71□□□□□ -1.82
LOC1YFR001W TAM41P53230 385 aa3.71□□□□□ -1.82
LOC1YFR001W AFT2Q08957 416 aa3.71□□□□□ -1.82
LOC1YFR001W RVB2Q12464 471 aaKnown RBP3.71□□□□□ -1.82
LOC1YFR001W COX1P00401 534 aa3.7□□□□□ -1.82
LOC1YFR001W BUD16P39988 312 aa3.7□□□□□ -1.82
LOC1YFR001W CIN1P40987 1014 aa3.7□□□□□ -1.82
LOC1YFR001W PSA1P41940 361 aaKnown RBP3.7□□□□□ -1.82
LOC1YFR001W IRC7P43623 340 aa3.7□□□□□ -1.82
LOC1YFR001W YGR079WP53249 370 aa3.7□□□□□ -1.82
LOC1YFR001W ERG13P54839 491 aaKnown RBP3.7□□□□□ -1.82
LOC1YFR001W GTB1Q04924 702 aa3.7□□□□□ -1.82
LOC1YFR001W CIA1Q05583 330 aa3.7□□□□□ -1.82
LOC1YFR001W YOR389WQ08912 624 aa3.7□□□□□ -1.82
LOC1YFR001W ILV2P07342 687 aaKnown RBP3.69□□□□□ -1.82
LOC1YFR001W YMR085WP0CF18 432 aa3.69□□□□□ -1.82
LOC1YFR001W NCP1P16603 691 aaKnown RBP3.69□□□□□ -1.82
LOC1YFR001W MSM1P22438 575 aa3.69□□□□□ -1.82
LOC1YFR001W PTC6P25646 442 aa3.69□□□□□ -1.82
LOC1YFR001W LAC1P28496 418 aa3.69□□□□□ -1.82
LOC1YFR001W GSH1P32477 678 aa3.69□□□□□ -1.82
LOC1YFR001W HES1P35843 434 aa3.69□□□□□ -1.82
LOC1YFR001W UBP7P40453 1071 aa3.69□□□□□ -1.82
LOC1YFR001W FAF1P40546 346 aaPredicted RBP3.69□□□□□ -1.82
LOC1YFR001W MTG1Q03151 367 aaPredicted RBP3.69□□□□□ -1.82
LOC1YFR001W TRS130Q03660 1102 aa3.69□□□□□ -1.82
LOC1YFR001W SNU56Q03782 492 aaKnown RBP3.69□□□□□ -1.82
LOC1YFR001W GCD7P32502 381 aaPredicted RBP3.68□□□□□ -1.82
LOC1YFR001W ERV46P39727 415 aa3.68□□□□□ -1.82
LOC1YFR001W FUN12P39730 1002 aaKnown RBP3.68□□□□□ -1.82
LOC1YFR001W SKP2P42843 763 aa3.68□□□□□ -1.82
LOC1YFR001W STP1Q00947 519 aa3.68□□□□□ -1.82
LOC1YFR001W LEA1Q08963 238 aaPredicted RBP3.68□□□□□ -1.82
LOC1YFR001W ICT1Q12385 394 aa3.68□□□□□ -1.82
LOC1YFR001W ILS1P09436 1072 aaKnown RBP3.67□□□□□ -1.82
LOC1YFR001W ZAP1P47043 880 aa3.67□□□□□ -1.82
LOC1YFR001W UBX6P47049 396 aa3.67□□□□□ -1.82
LOC1YFR001W ARC35P53731 342 aaKnown RBP3.67□□□□□ -1.82
LOC1YFR001W YDR109CQ04585 715 aa3.67□□□□□ -1.82
LOC1YFR001W CRC1Q12289 327 aa3.67□□□□□ -1.82
LOC1YFR001W YML003WP0CF16 290 aa3.66□□□□□ -1.82
LOC1YFR001W YCL049CP25577 312 aa3.66□□□□□ -1.82
LOC1YFR001W DBF20P32328 564 aa3.66□□□□□ -1.82
LOC1YFR001W ECM32P32644 1121 aaKnown RBP3.66□□□□□ -1.82
LOC1YFR001W NPR3P38742 1146 aa3.66□□□□□ -1.82
LOC1YFR001W PSF2P40359 213 aa3.66□□□□□ -1.82
LOC1YFR001W ERR3P42222 437 aa3.66□□□□□ -1.82
LOC1YFR001W MSY1P48527 492 aa3.66□□□□□ -1.82
LOC1YFR001W GLO1P50107 326 aa3.66□□□□□ -1.82
LOC1YFR001W YRB30P53107 440 aaPredicted RBP3.66□□□□□ -1.82
LOC1YFR001W COP1P53622 1201 aaKnown RBP3.66□□□□□ -1.82
LOC1YFR001W STP3Q05937 343 aa3.66□□□□□ -1.82
LOC1YFR001W BLS1Q06071 122 aa3.66□□□□□ -1.82
LOC1YFR001W ATG23Q06671 453 aa3.66□□□□□ -1.82
LOC1YFR001W VAM6Q07468 1049 aa3.66□□□□□ -1.82
LOC1YFR001W NUC1P08466 329 aa3.65□□□□□ -1.83
LOC1YFR001W YAP1P19880 650 aaKnown RBP3.65□□□□□ -1.83
LOC1YFR001W COQ3P27680 312 aa3.65□□□□□ -1.83
LOC1YFR001W TMT1P32643 299 aa3.65□□□□□ -1.83
LOC1YFR001W GEX2P36173 615 aa3.65□□□□□ -1.83
LOC1YFR001W EXO84P38261 753 aa3.65□□□□□ -1.83
LOC1YFR001W DJP1P40564 432 aa3.65□□□□□ -1.83
LOC1YFR001W ORC5P50874 479 aa3.65□□□□□ -1.83
LOC1YFR001W YPR003CP53394 754 aa3.65□□□□□ -1.83
LOC1YFR001W MRPL13Q02204 264 aa3.65□□□□□ -1.83
LOC1YFR001W THI3Q07471 609 aa3.65□□□□□ -1.83
LOC1YFR001W BAG7Q12128 409 aa3.65□□□□□ -1.83
LOC1YFR001W MTF2P10849 440 aa3.64□□□□□ -1.83
LOC1YFR001W LRE1P25579 583 aaKnown RBP3.64□□□□□ -1.83
LOC1YFR001W RFA2P26754 273 aaKnown RBP3.64□□□□□ -1.83
LOC1YFR001W PTH2P34222 208 aa3.64□□□□□ -1.83
LOC1YFR001W PHM8P40025 321 aa3.64□□□□□ -1.83
LOC1YFR001W IES5P40060 125 aa3.64□□□□□ -1.83
LOC1YFR001W YIL024CP40543 189 aa3.64□□□□□ -1.83
LOC1YFR001W CFD1P40558 293 aa3.64□□□□□ -1.83
LOC1YFR001W YAP7Q08182 245 aa3.64□□□□□ -1.83
LOC1YFR001W GET3Q12154 354 aaKnown RBP3.64□□□□□ -1.83
LOC1YFR001W ATP2P00830 511 aaKnown RBP3.63□□□□□ -1.83
LOC1YFR001W GAL4P04386 881 aa3.63□□□□□ -1.83
LOC1YFR001W UBC1P21734 215 aaKnown RBP3.63□□□□□ -1.83
LOC1YFR001W YSP3P25036 478 aa3.63□□□□□ -1.83
LOC1YFR001W NUP120P35729 1037 aa3.63□□□□□ -1.83
LOC1YFR001W MRPL36P36531 177 aa3.63□□□□□ -1.83
LOC1YFR001W JHD1P40034 492 aa3.63□□□□□ -1.83
LOC1YFR001W MNT3P40549 630 aa3.63□□□□□ -1.83
LOC1YFR001W CDC1P40986 491 aa3.63□□□□□ -1.83
LOC1YFR001W YJL107CP42947 387 aa3.63□□□□□ -1.83
LOC1YFR001W GAT1P43574 510 aa3.63□□□□□ -1.83
LOC1YFR001W RTS3P53289 263 aa3.63□□□□□ -1.83
LOC1YFR001W ADE16P54113 591 aaKnown RBP3.63□□□□□ -1.83
LOC1YFR001W ATG16Q03818 150 aa3.63□□□□□ -1.83
LOC1YFR001W PFA4Q12006 378 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms