RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W AKR1P39010 764 aa5.41□□□□□ -1.54
UBP9YER098W SPO22P40511 975 aa5.41□□□□□ -1.54
UBP9YER098W SIZ1Q04195 904 aa5.41□□□□□ -1.54
UBP9YER098W RGA2Q06407 1009 aa5.41□□□□□ -1.54
UBP9YER098W NOP6Q07623 225 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W CHS5Q12114 671 aaKnown RBP5.41□□□□□ -1.54
UBP9YER098W KES1P35844 434 aaKnown RBP5.4□□□□□ -1.54
UBP9YER098W MCX1P38323 520 aaPredicted RBP5.4□□□□□ -1.54
UBP9YER098W YHL017WP38745 532 aa5.4□□□□□ -1.54
UBP9YER098W PTC7P38797 343 aa5.4□□□□□ -1.54
UBP9YER098W PEX7P39108 375 aa5.4□□□□□ -1.54
UBP9YER098W GTS1P40956 396 aa5.4□□□□□ -1.54
UBP9YER098W OYE3P41816 400 aaPredicted RBP5.4□□□□□ -1.54
UBP9YER098W SHE4P51534 789 aa5.4□□□□□ -1.54
UBP9YER098W YNL247WP53852 767 aaKnown RBP5.4□□□□□ -1.54
UBP9YER098W SXM1Q04175 944 aaKnown RBP5.4□□□□□ -1.54
UBP9YER098W TYR1P20049 452 aa5.4□□□□□ -1.55
UBP9YER098W CMK1P27466 446 aaKnown RBP5.4□□□□□ -1.55
UBP9YER098W ATO2P32907 282 aa5.4□□□□□ -1.55
UBP9YER098W RIB7P33312 244 aa5.4□□□□□ -1.55
UBP9YER098W PXL1P36166 706 aa5.4□□□□□ -1.55
UBP9YER098W ADE17P38009 592 aaKnown RBP5.4□□□□□ -1.55
UBP9YER098W UME6P39001 836 aa5.4□□□□□ -1.55
UBP9YER098W EFM4P40516 257 aa5.4□□□□□ -1.55
UBP9YER098W SEC27P41811 889 aaKnown RBP5.4□□□□□ -1.55
UBP9YER098W GCN20P43535 752 aaKnown RBP5.4□□□□□ -1.55
UBP9YER098W EPL1P43572 832 aa5.4□□□□□ -1.55
UBP9YER098W PSP2P50109 593 aaKnown RBP5.4□□□□□ -1.55
UBP9YER098W MRPL19P53875 158 aa5.4□□□□□ -1.55
UBP9YER098W VPS64Q03944 604 aa5.4□□□□□ -1.55
UBP9YER098W TRE1Q08919 783 aa5.4□□□□□ -1.55
UBP9YER098W TAH18Q12181 623 aa5.4□□□□□ -1.55
UBP9YER098W OCA6Q12454 224 aa5.4□□□□□ -1.55
UBP9YER098W HSH49Q99181 213 aaPredicted RBP5.4□□□□□ -1.55
UBP9YER098W RRP5Q05022 1729 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W AI3P03877 415 aa5.39□□□□□ -1.55
UBP9YER098W PYC1P11154 1178 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W BET2P20133 325 aa5.39□□□□□ -1.55
UBP9YER098W PGS1P25578 521 aa5.39□□□□□ -1.55
UBP9YER098W YBR062CP38239 180 aa5.39□□□□□ -1.55
UBP9YER098W YLF2P38746 405 aa5.39□□□□□ -1.55
UBP9YER098W SDP1P40479 209 aa5.39□□□□□ -1.55
UBP9YER098W PFA3P42836 336 aa5.39□□□□□ -1.55
UBP9YER098W TMA22P47089 198 aaPredicted RBP5.39□□□□□ -1.55
UBP9YER098W RBL2P48606 106 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W ARI1P53111 347 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W ORM1P53224 222 aa5.39□□□□□ -1.55
UBP9YER098W YNR014WP53719 212 aa5.39□□□□□ -1.55
UBP9YER098W ERG5P54781 538 aa5.39□□□□□ -1.55
UBP9YER098W RSM24Q03976 319 aa5.39□□□□□ -1.55
UBP9YER098W PLP1Q04004 230 aa5.39□□□□□ -1.55
UBP9YER098W TAF11Q04226 346 aa5.39□□□□□ -1.55
UBP9YER098W GFD1Q04839 188 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W YLR287CQ05881 355 aa5.39□□□□□ -1.55
UBP9YER098W SPN1Q06505 410 aaPredicted RBP5.39□□□□□ -1.55
UBP9YER098W WHI4Q07655 649 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W OSW1Q08692 278 aa5.39□□□□□ -1.55
UBP9YER098W ATG11Q12527 1178 aa5.39□□□□□ -1.55
UBP9YER098W SEM1O94742 89 aa5.39□□□□□ -1.55
UBP9YER098W ADE3P07245 946 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W SPE1P08432 466 aa5.39□□□□□ -1.55
UBP9YER098W SUI3P09064 285 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W FUR1P18562 216 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W CLN1P20437 546 aa5.39□□□□□ -1.55
UBP9YER098W RIT1P23796 513 aa5.39□□□□□ -1.55
UBP9YER098W PET127P32606 800 aa5.39□□□□□ -1.55
UBP9YER098W TIF3P34167 436 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W YET1P35723 206 aa5.39□□□□□ -1.55
UBP9YER098W LIN1P38852 340 aaPredicted RBP5.39□□□□□ -1.55
UBP9YER098W CCT2P39076 527 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W PZF1P39933 429 aa5.39□□□□□ -1.55
UBP9YER098W LYS14P40971 790 aa5.39□□□□□ -1.55
UBP9YER098W TAF4P50105 388 aa5.39□□□□□ -1.55
UBP9YER098W SHE10P53075 577 aa5.39□□□□□ -1.55
UBP9YER098W MUS81Q04149 632 aaPredicted RBP5.39□□□□□ -1.55
UBP9YER098W SNO4Q04902 237 aa5.39□□□□□ -1.55
UBP9YER098W TAF9Q05027 157 aa5.39□□□□□ -1.55
UBP9YER098W SLK19Q08581 821 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W HSP33Q08914 237 aaKnown RBP5.39□□□□□ -1.55
UBP9YER098W HSP32Q08992 237 aa5.39□□□□□ -1.55
UBP9YER098W SCM3Q12334 223 aa5.39□□□□□ -1.55
UBP9YER098W FUM1P08417 488 aaKnown RBP5.38□□□□□ -1.55
UBP9YER098W YMR085WP0CF18 432 aa5.38□□□□□ -1.55
UBP9YER098W RPS24AP0CX31 135 aaKnown RBP5.38□□□□□ -1.55
UBP9YER098W RPS24BP0CX32 135 aaKnown RBP5.38□□□□□ -1.55
UBP9YER098W FRS1P15624 595 aaKnown RBP5.38□□□□□ -1.55
UBP9YER098W SPO12P17123 173 aa5.38□□□□□ -1.55
UBP9YER098W RAD57P25301 460 aa5.38□□□□□ -1.55
UBP9YER098W CDC10P25342 322 aaKnown RBP5.38□□□□□ -1.55
UBP9YER098W VMA8P32610 256 aaKnown RBP5.38□□□□□ -1.55
UBP9YER098W CSE1P33307 960 aa5.38□□□□□ -1.55
UBP9YER098W SHQ1P40486 507 aaPredicted RBP5.38□□□□□ -1.55
UBP9YER098W AXL1P40851 1208 aa5.38□□□□□ -1.55
UBP9YER098W BUD8P41698 603 aa5.38□□□□□ -1.55
UBP9YER098W DSL1P53847 754 aa5.38□□□□□ -1.55
UBP9YER098W NGL3Q03210 505 aa5.38□□□□□ -1.55
UBP9YER098W SPC24Q04477 213 aa5.38□□□□□ -1.55
UBP9YER098W YLR352WQ06479 807 aa5.38□□□□□ -1.55
UBP9YER098W PSR1Q07800 427 aa5.38□□□□□ -1.55
UBP9YER098W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms