RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C CYM1P32898 989 aa7.92□□□□□ -1.14
PUP3YER094C LOS1P33418 1100 aaPredicted RBP7.92□□□□□ -1.14
PUP3YER094C COY1P34237 679 aa7.92□□□□□ -1.14
PUP3YER094C YJL206CP39529 758 aa7.92□□□□□ -1.14
PUP3YER094C KTR7P40504 517 aa7.92□□□□□ -1.14
PUP3YER094C LIA1P47120 325 aaKnown RBP7.92□□□□□ -1.14
PUP3YER094C AMA1P50082 593 aa7.92□□□□□ -1.14
PUP3YER094C LSC1P53598 329 aaKnown RBP7.92□□□□□ -1.14
PUP3YER094C EFM6P53970 246 aa7.92□□□□□ -1.14
PUP3YER094C TRS31Q03337 283 aa7.92□□□□□ -1.14
PUP3YER094C TMN2Q04562 672 aa7.92□□□□□ -1.14
PUP3YER094C CDC123Q05791 360 aa7.92□□□□□ -1.14
PUP3YER094C YSH1Q06224 779 aaPredicted RBP7.92□□□□□ -1.14
PUP3YER094C TDA5Q06417 326 aaKnown RBP7.92□□□□□ -1.14
PUP3YER094C SLD7Q08457 257 aa7.92□□□□□ -1.14
PUP3YER094C YEL077CQ3E7X8 1277 aa7.92□□□□□ -1.14
PUP3YER094C SST2P11972 698 aaKnown RBP7.91□□□□□ -1.14
PUP3YER094C INO1P11986 533 aa7.91□□□□□ -1.14
PUP3YER094C ARF2P19146 181 aaKnown RBP7.91□□□□□ -1.14
PUP3YER094C ACO1P19414 778 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
PUP3YER094C CLN1P20437 546 aa7.91□□□□□ -1.14
PUP3YER094C DAL81P21657 970 aa7.91□□□□□ -1.14
PUP3YER094C RAM1P22007 431 aa7.91□□□□□ -1.14
PUP3YER094C ATP12P22135 325 aa7.91□□□□□ -1.14
PUP3YER094C RBK1P25332 333 aa7.91□□□□□ -1.14
PUP3YER094C DCC1P25559 380 aa7.91□□□□□ -1.14
PUP3YER094C AAD3P25612 363 aa7.91□□□□□ -1.14
PUP3YER094C KIP2P28743 706 aa7.91□□□□□ -1.14
PUP3YER094C SRP101P32916 621 aa7.91□□□□□ -1.14
PUP3YER094C RRP14P36080 434 aaKnown RBP7.91□□□□□ -1.14
PUP3YER094C SET3P36124 751 aa7.91□□□□□ -1.14
PUP3YER094C TFA2P36145 328 aa7.91□□□□□ -1.14
PUP3YER094C APM3P38153 483 aa7.91□□□□□ -1.14
PUP3YER094C MRP21P38175 177 aa7.91□□□□□ -1.14
PUP3YER094C SLX8P40072 274 aa7.91□□□□□ -1.14
PUP3YER094C STR3P53101 465 aaKnown RBP7.91□□□□□ -1.14
PUP3YER094C TUB4P53378 473 aa7.91□□□□□ -1.14
PUP3YER094C UBX4P54730 416 aa7.91□□□□□ -1.14
PUP3YER094C YPL014WQ02606 381 aa7.91□□□□□ -1.14
PUP3YER094C RPN9Q04062 393 aaKnown RBP7.91□□□□□ -1.14
PUP3YER094C CMS1Q07897 291 aaKnown RBP7.91□□□□□ -1.14
PUP3YER094C BUD20Q08004 166 aaPredicted RBP7.91□□□□□ -1.14
PUP3YER094C SGO1Q08490 590 aa7.91□□□□□ -1.14
PUP3YER094C NDD1Q08887 554 aa7.91□□□□□ -1.14
PUP3YER094C YPR117WQ06116 2489 aa7.91□□□□□ -1.14
PUP3YER094C SCH9P11792 824 aaKnown RBP7.9□□□□□ -1.14
PUP3YER094C MRPL8P22353 238 aa7.9□□□□□ -1.14
PUP3YER094C AAT2P23542 418 aaKnown RBP7.9□□□□□ -1.14
PUP3YER094C RIM1P32445 135 aaKnown RBP7.9□□□□□ -1.14
PUP3YER094C GDA1P32621 518 aa7.9□□□□□ -1.14
PUP3YER094C CAB3P36076 571 aa7.9□□□□□ -1.14
PUP3YER094C MAK5P38112 773 aaPredicted RBP7.9□□□□□ -1.14
PUP3YER094C POL12P38121 705 aaPredicted RBP7.9□□□□□ -1.14
PUP3YER094C YHI9P38765 294 aa7.9□□□□□ -1.14
PUP3YER094C MED6P38782 295 aa7.9□□□□□ -1.14
PUP3YER094C MEF2P39677 819 aa7.9□□□□□ -1.14
PUP3YER094C PEP8P40335 379 aa7.9□□□□□ -1.14
PUP3YER094C YTP1P53584 459 aa7.9□□□□□ -1.14
PUP3YER094C NOP15P53927 220 aaPredicted RBP7.9□□□□□ -1.14
PUP3YER094C PET117Q02771 107 aa7.9□□□□□ -1.14
PUP3YER094C PML39Q03760 334 aa7.9□□□□□ -1.14
PUP3YER094C RSC2Q06488 889 aa7.9□□□□□ -1.14
PUP3YER094C SLP1Q12232 587 aa7.9□□□□□ -1.14
PUP3YER094C YLR046CQ12253 270 aa7.9□□□□□ -1.14
PUP3YER094C PEX11Q12462 236 aa7.9□□□□□ -1.14
PUP3YER094C KCS1Q12494 1050 aa7.9□□□□□ -1.14
PUP3YER094C CCH1P50077 2039 aa7.9□□□□□ -1.15
PUP3YER094C HSP26P15992 214 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
PUP3YER094C SEC14P24280 304 aaKnown RBP7.89□□□□□ -1.15
PUP3YER094C YSP3P25036 478 aa7.89□□□□□ -1.15
PUP3YER094C CDC10P25342 322 aaKnown RBP7.89□□□□□ -1.15
PUP3YER094C HRR25P29295 494 aaKnown RBP7.89□□□□□ -1.15
PUP3YER094C BEM1P29366 551 aa7.89□□□□□ -1.15
PUP3YER094C YBR032WP38223 100 aa7.89□□□□□ -1.15
PUP3YER094C YBR062CP38239 180 aa7.89□□□□□ -1.15
PUP3YER094C GGA2P38817 585 aaKnown RBP7.89□□□□□ -1.15
PUP3YER094C EXO1P39875 702 aa7.89□□□□□ -1.15
PUP3YER094C RGI2P40188 164 aa7.89□□□□□ -1.15
PUP3YER094C CHS6P40955 746 aa7.89□□□□□ -1.15
PUP3YER094C TDA10P42938 290 aa7.89□□□□□ -1.15
PUP3YER094C BUD13P46947 266 aaPredicted RBP7.89□□□□□ -1.15
PUP3YER094C ARH1P48360 493 aa7.89□□□□□ -1.15
PUP3YER094C SAP4P53036 818 aa7.89□□□□□ -1.15
PUP3YER094C YGL140CP53120 1219 aa7.89□□□□□ -1.15
PUP3YER094C YNR065CP53751 1116 aa7.89□□□□□ -1.15
PUP3YER094C YVH1Q02256 364 aaKnown RBP7.89□□□□□ -1.15
PUP3YER094C NUP100Q02629 959 aa7.89□□□□□ -1.15
PUP3YER094C YMR209CQ03648 457 aa7.89□□□□□ -1.15
PUP3YER094C GSF2Q04697 403 aaKnown RBP7.89□□□□□ -1.15
PUP3YER094C RGS2Q99188 309 aa7.89□□□□□ -1.15
PUP3YER094C UBR1P19812 1950 aa7.88□□□□□ -1.15
PUP3YER094C REV1P12689 985 aa7.88□□□□□ -1.15
PUP3YER094C NSP1P14907 823 aaKnown RBP7.88□□□□□ -1.15
PUP3YER094C GEX1P25596 615 aa7.88□□□□□ -1.15
PUP3YER094C GCD11P32481 527 aaKnown RBP7.88□□□□□ -1.15
PUP3YER094C GEX2P36173 615 aa7.88□□□□□ -1.15
PUP3YER094C RDH54P38086 958 aa7.88□□□□□ -1.15
PUP3YER094C OAF1P39720 1047 aaPredicted RBP7.88□□□□□ -1.15
PUP3YER094C HEM14P40012 539 aa7.88□□□□□ -1.15
PUP3YER094C YJL107CP42947 387 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms