RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	YKR015C	P36111	568 aa		4.23	□□□□□ -1.73
NUG1	YER006W	CAF4	P36130	643 aa		4.23	□□□□□ -1.73
NUG1	YER006W	GPT2	P36148	743 aa		4.23	□□□□□ -1.73
NUG1	YER006W	KAP104	P38217	918 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	YBR225W	P38321	900 aa		4.23	□□□□□ -1.73
NUG1	YER006W	DED81	P38707	554 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	EDC3	P39998	551 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	PAC11	P40960	533 aa		4.23	□□□□□ -1.73
NUG1	YER006W	TFG2	P41896	400 aa	Predicted RBP	4.23	□□□□□ -1.73
NUG1	YER006W	DAK2	P43550	591 aa		4.23	□□□□□ -1.73
NUG1	YER006W	LOC1	P43586	204 aa	Predicted RBP	4.23	□□□□□ -1.73
NUG1	YER006W	MNN11	P46985	422 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	YJL055W	P47044	245 aa		4.23	□□□□□ -1.73
NUG1	YER006W	GCV1	P48015	400 aa		4.23	□□□□□ -1.73
NUG1	YER006W	IMD3	P50095	523 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	MRM2	P53123	320 aa		4.23	□□□□□ -1.73
NUG1	YER006W	MNP1	P53163	194 aa	Predicted RBP	4.23	□□□□□ -1.73
NUG1	YER006W	YGR021W	P53212	290 aa		4.23	□□□□□ -1.73
NUG1	YER006W	BSC5	P53755	489 aa		4.23	□□□□□ -1.73
NUG1	YER006W	PGA2	P53903	129 aa		4.23	□□□□□ -1.73
NUG1	YER006W	SPO20	Q04359	397 aa		4.23	□□□□□ -1.73
NUG1	YER006W	RGC1	Q06108	1083 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	SFH1	Q06168	426 aa		4.23	□□□□□ -1.73
NUG1	YER006W	YEH2	Q07950	538 aa		4.23	□□□□□ -1.73
NUG1	YER006W	PGC1	Q08959	321 aa		4.23	□□□□□ -1.73
NUG1	YER006W	DAS2	Q12084	232 aa		4.23	□□□□□ -1.73
NUG1	YER006W	TRL1	P09880	827 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	ATE1	P16639	503 aa		4.23	□□□□□ -1.73
NUG1	YER006W	NPR1	P22211	790 aa		4.23	□□□□□ -1.73
NUG1	YER006W	SRO9	P25567	434 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	RPS7A	P26786	190 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	HXT3	P32466	567 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	UBP11	P36026	717 aa		4.23	□□□□□ -1.73
NUG1	YER006W	STV1	P37296	890 aa		4.23	□□□□□ -1.73
NUG1	YER006W	ALG3	P38179	458 aa		4.23	□□□□□ -1.73
NUG1	YER006W	YBR138C	P38277	524 aa		4.23	□□□□□ -1.73
NUG1	YER006W	TOK1	P40310	691 aa		4.23	□□□□□ -1.73
NUG1	YER006W	CIN5	P40917	295 aa		4.23	□□□□□ -1.73
NUG1	YER006W	HUL4	P40985	892 aa		4.23	□□□□□ -1.73
NUG1	YER006W	YFH7	P43591	353 aa		4.23	□□□□□ -1.73
NUG1	YER006W	FAR7	P43592	221 aa		4.23	□□□□□ -1.73
NUG1	YER006W	CNN1	P43618	361 aa		4.23	□□□□□ -1.73
NUG1	YER006W	CIT3	P43635	486 aa		4.23	□□□□□ -1.73
NUG1	YER006W	POL31	P46957	487 aa		4.23	□□□□□ -1.73
NUG1	YER006W	MAD3	P47074	515 aa		4.23	□□□□□ -1.73
NUG1	YER006W	HFM1	P51979	1187 aa		4.23	□□□□□ -1.73
NUG1	YER006W	TEL2	P53038	688 aa		4.23	□□□□□ -1.73
NUG1	YER006W	IMP4	P53941	290 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	IRC4	Q03036	179 aa		4.23	□□□□□ -1.73
NUG1	YER006W	YDR131C	Q03899	556 aa		4.23	□□□□□ -1.73
NUG1	YER006W	SND1	Q04007	877 aa		4.23	□□□□□ -1.73
NUG1	YER006W	DOT1	Q04089	582 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	EMI2	Q04409	500 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	COA4	Q05809	96 aa		4.23	□□□□□ -1.73
NUG1	YER006W	PUS7	Q08647	676 aa	Known RBP	4.23	□□□□□ -1.73
NUG1	YER006W	LYS2	P07702	1392 aa		4.22	□□□□□ -1.73
NUG1	YER006W	RPO41	P13433	1351 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	COQ4	O13525	335 aa		4.22	□□□□□ -1.73
NUG1	YER006W	CIT2	P08679	460 aa		4.22	□□□□□ -1.73
NUG1	YER006W	YGL041W-A	P0C5N3	154 aa		4.22	□□□□□ -1.73
NUG1	YER006W	CKI1	P20485	582 aa		4.22	□□□□□ -1.73
NUG1	YER006W	DAL7	P21826	554 aa		4.22	□□□□□ -1.73
NUG1	YER006W	SWI4	P25302	1093 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	RRP43	P25359	394 aa	Predicted RBP	4.22	□□□□□ -1.73
NUG1	YER006W	NAM9	P27929	486 aa		4.22	□□□□□ -1.73
NUG1	YER006W	SIN4	P32259	974 aa		4.22	□□□□□ -1.73
NUG1	YER006W	GDA1	P32621	518 aa		4.22	□□□□□ -1.73
NUG1	YER006W	GYP6	P32806	458 aa		4.22	□□□□□ -1.73
NUG1	YER006W	CYM1	P32898	989 aa		4.22	□□□□□ -1.73
NUG1	YER006W	WHI3	P34761	661 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	YKT6	P36015	200 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	APE3	P37302	537 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	NOP4	P37838	685 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	GRS1	P38088	690 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	SEA4	P38164	1038 aa		4.22	□□□□□ -1.73
NUG1	YER006W	CCC2	P38995	1004 aa		4.22	□□□□□ -1.73
NUG1	YER006W	YTA12	P40341	825 aa		4.22	□□□□□ -1.73
NUG1	YER006W	UTP25	P40498	721 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	RTS2	P40962	232 aa		4.22	□□□□□ -1.73
NUG1	YER006W	LYS14	P40971	790 aa		4.22	□□□□□ -1.73
NUG1	YER006W	ZIM17	P42844	174 aa		4.22	□□□□□ -1.73
NUG1	YER006W	FOL2	P51601	243 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	MCM6	P53091	1017 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	ZPR1	P53303	486 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	HEF3	P53978	1044 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	ADE16	P54113	591 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	CLU1	Q03690	1277 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	PPM1	Q04081	328 aa		4.22	□□□□□ -1.73
NUG1	YER006W	GFD1	Q04839	188 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	VPS54	Q12071	889 aa		4.22	□□□□□ -1.73
NUG1	YER006W	REX3	Q12090	404 aa		4.22	□□□□□ -1.73
NUG1	YER006W	NCA2	Q12374	616 aa		4.22	□□□□□ -1.73
NUG1	YER006W	EMP46	Q12396	444 aa		4.22	□□□□□ -1.73
NUG1	YER006W	TOR2	P32600	2474 aa	Known RBP	4.22	□□□□□ -1.73
NUG1	YER006W	HTS1	P07263	546 aa	Known RBP	4.21	□□□□□ -1.74
NUG1	YER006W	PUT4	P15380	627 aa		4.21	□□□□□ -1.74
NUG1	YER006W	OM45	P16547	393 aa		4.21	□□□□□ -1.74
NUG1	YER006W	SFL1	P20134	766 aa		4.21	□□□□□ -1.74
NUG1	YER006W	GFD2	P25370	566 aa	Known RBP	4.21	□□□□□ -1.74
NUG1	YER006W	RFS1	P38234	210 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms