RNA–Protein interactions for RNA: YDR501W

PLM2, Transcript of Putative transcription factor, contains Forkhead Associated domain, yeast

Gene PLM2, Length 1,566 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PLM2	YDR501W	SEM1	O94742	89 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	CPA2	P03965	1118 aa	Known RBP	4.17	□□□□□ -1.74
PLM2	YDR501W	LRE1	P25579	583 aa	Known RBP	4.17	□□□□□ -1.74
PLM2	YDR501W	MRPL9	P31334	269 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	SIP1	P32578	815 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	RPF2	P36160	344 aa	Known RBP	4.17	□□□□□ -1.74
PLM2	YDR501W	JNM1	P36224	373 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	YMC2	P38087	329 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	TDP1	P38319	544 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	VPS8	P39702	1274 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	YJR061W	P40355	935 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	VPS4	P52917	437 aa		4.17	□□□□□ -1.74
PLM2	YDR501W	CHO2	P05374	869 aa	Known RBP	4.16	□□□□□ -1.74
PLM2	YDR501W	RPB2	P08518	1224 aa	Known RBP	4.16	□□□□□ -1.74
PLM2	YDR501W	RNR3	P21672	869 aa	Known RBP	4.16	□□□□□ -1.74
PLM2	YDR501W	OAR1	P35731	278 aa		4.16	□□□□□ -1.74
PLM2	YDR501W	MOH1	P38191	138 aa		4.16	□□□□□ -1.74
PLM2	YDR501W	MTG2	P38860	518 aa		4.16	□□□□□ -1.74
PLM2	YDR501W	FUN12	P39730	1002 aa	Known RBP	4.16	□□□□□ -1.74
PLM2	YDR501W	ARC1	P46672	376 aa	Known RBP	4.16	□□□□□ -1.74
PLM2	YDR501W	SIP4	P46954	829 aa		4.16	□□□□□ -1.74
PLM2	YDR501W	UPF3	P48412	387 aa	Known RBP	4.16	□□□□□ -1.74
PLM2	YDR501W	IMO32	P53219	342 aa		4.16	□□□□□ -1.74
PLM2	YDR501W	CPR8	P53728	308 aa		4.16	□□□□□ -1.74
PLM2	YDR501W	YDL242W	Q07746	117 aa		4.16	□□□□□ -1.74
PLM2	YDR501W	AAC3	P18238	307 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	MRP20	P32387	263 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	NOP4	P37838	685 aa	Known RBP	4.15	□□□□□ -1.74
PLM2	YDR501W	NDE1	P40215	560 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	UBP7	P40453	1071 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	DJP1	P40564	432 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	SRB7	P47822	140 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	YGL117W	P53133	265 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	REG1	Q00816	1014 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	UBP16	Q02863	499 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	STP3	Q05937	343 aa		4.15	□□□□□ -1.74
PLM2	YDR501W	MRI1	Q06489	411 aa	Known RBP	4.15	□□□□□ -1.74
PLM2	YDR501W	IMH1	Q06704	911 aa	Known RBP	4.15	□□□□□ -1.74
PLM2	YDR501W	TPK2	P06245	380 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	CDC24	P11433	854 aa	Predicted RBP	4.14	□□□□□ -1.75
PLM2	YDR501W	AMD2	P22580	549 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	PRE8	P23639	250 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	ERG8	P24521	451 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	TFC3	P34111	1160 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	MIT1	P40002	666 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	PFK26	P40433	827 aa	Known RBP	4.14	□□□□□ -1.75
PLM2	YDR501W	OPT1	P40897	799 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	UBX6	P47049	396 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	COG2	P53271	262 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	YNL092W	P53934	400 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	WAR1	Q03631	944 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PLM2	YDR501W	MRH1	Q12117	320 aa	Predicted RBP	4.14	□□□□□ -1.75
PLM2	YDR501W	BAG7	Q12128	409 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	RPN13	O13563	156 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	YML003W	P0CF16	290 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	MRP7	P12687	371 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	CDC15	P27636	974 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	GEX2	P36173	615 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	LYS14	P40971	790 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	YGR079W	P53249	370 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	GND2	P53319	492 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	AAT1	Q01802	451 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	SDH5	Q08230	162 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	YPL191C	Q08930	360 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	HUA2	Q12134	243 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	LCB4	Q12246	624 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	PRS5	Q12265	496 aa	Known RBP	4.14	□□□□□ -1.75
PLM2	YDR501W	PNS1	Q12412	539 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	YOR111W	Q99210	232 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	VCX1	Q99385	411 aa		4.14	□□□□□ -1.75
PLM2	YDR501W	YMR084W	A2P2R3	262 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	CDC31	P06704	161 aa	Known RBP	4.13	□□□□□ -1.75
PLM2	YDR501W	HES1	P35843	434 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	ESL2	P36168	1195 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	MUP3	P38734	546 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	ESL1	P40456	1118 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	MUB1	Q03162	620 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	YML119W	Q03208	357 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	TMN2	Q04562	672 aa		4.13	□□□□□ -1.75
PLM2	YDR501W	COX1	P00401	534 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	STE12	P13574	688 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	CMK1	P27466	446 aa	Known RBP	4.12	□□□□□ -1.75
PLM2	YDR501W	SRB5	P32585	307 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	SAC6	P32599	642 aa	Known RBP	4.12	□□□□□ -1.75
PLM2	YDR501W	GDA1	P32621	518 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	MTH1	P35198	433 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	PSD1	P39006	500 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	NPA3	P47122	385 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	AAD10	P47182	288 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	ASN1	P49089	572 aa	Known RBP	4.12	□□□□□ -1.75
PLM2	YDR501W	RBG2	P53295	368 aa	Known RBP	4.12	□□□□□ -1.75
PLM2	YDR501W	SLI1	P53304	468 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	DCP2	P53550	970 aa	Known RBP	4.12	□□□□□ -1.75
PLM2	YDR501W	YNL058C	P53947	316 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	RAD33	Q04231	177 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	YKU80	Q04437	629 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	AHA1	Q12449	350 aa	Known RBP	4.12	□□□□□ -1.75
PLM2	YDR501W	AI5_ALPHA	Q9ZZX1	630 aa		4.12	□□□□□ -1.75
PLM2	YDR501W	RPL7A	P05737	244 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms