RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeast

Gene SDC1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDC1	YDR469W	YMR317W	Q04893	1140 aa		2.68	□□□□□ -1.98
SDC1	YDR469W	GRC3	Q07845	632 aa		2.68	□□□□□ -1.98
SDC1	YDR469W	MED1	Q12321	566 aa		2.68	□□□□□ -1.98
SDC1	YDR469W	ENT1	Q12518	454 aa		2.68	□□□□□ -1.98
SDC1	YDR469W	RTP1	Q12751	981 aa		2.68	□□□□□ -1.98
SDC1	YDR469W	RPS21B	Q3E754	87 aa	Known RBP	2.68	□□□□□ -1.98
SDC1	YDR469W	PNO1	Q99216	274 aa	Known RBP	2.68	□□□□□ -1.98
SDC1	YDR469W	CDC31	P06704	161 aa	Known RBP	2.67	□□□□□ -1.98
SDC1	YDR469W	MSM1	P22438	575 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	SAN1	P22470	610 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	MSH1	P25846	959 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	SCO2	P38072	301 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	EMP65	P40085	556 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	YIL169C	P40442	995 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	BFA1	P47113	574 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	TAF4	P50105	388 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	HOS2	P53096	452 aa	Predicted RBP	2.67	□□□□□ -1.98
SDC1	YDR469W	BLS1	Q06071	122 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	ARR3	Q06598	404 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	NUR1	Q12066	484 aa		2.67	□□□□□ -1.98
SDC1	YDR469W	RPS17A	P02407	136 aa	Known RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	RPS17B	P14127	136 aa	Known RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	RER1	P25560	188 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	MUD2	P36084	527 aa	Known RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	PSY4	P38193	441 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	FAT1	P38225	669 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	HXT6	P39003	570 aa	Known RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	HXT7	P39004	570 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	VPS8	P39702	1274 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	YEL068C	P39977	110 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	PRM2	P40534	656 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	ASK10	P48361	1146 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	RNR4	P49723	345 aa	Known RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	TEP1	P53916	434 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	CEG1	Q01159	459 aa	Predicted RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	ERO1	Q03103	563 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	TRS130	Q03660	1102 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	SXM1	Q04175	944 aa	Known RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	VIP1	Q06685	1146 aa	Known RBP	2.66	□□□□□ -1.98
SDC1	YDR469W	MLH2	Q07980	695 aa		2.66	□□□□□ -1.98
SDC1	YDR469W	YPK1	P12688	680 aa	Known RBP	2.65	□□□□□ -1.99
SDC1	YDR469W	ATP12	P22135	325 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	SEC65	P29478	273 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	RPS0A	P32905	252 aa	Known RBP	2.65	□□□□□ -1.99
SDC1	YDR469W	SLC1	P33333	303 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	RRN3	P36070	627 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	FTH1	P38310	465 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	SAW1	P39735	261 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	LRO1	P40345	661 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	SKP2	P42843	763 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	EIS1	Q05050	843 aa	Known RBP	2.65	□□□□□ -1.99
SDC1	YDR469W	OPY2	Q06810	360 aa		2.65	□□□□□ -1.99
SDC1	YDR469W	CET1	O13297	549 aa	Predicted RBP	2.64	□□□□□ -1.99
SDC1	YDR469W	AAC1	P04710	309 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	SWI6	P09959	803 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	AAC3	P18238	307 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	FUR1	P18562	216 aa	Known RBP	2.64	□□□□□ -1.99
SDC1	YDR469W	PHO3	P24031	467 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	PXA2	P34230	853 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	NUP120	P35729	1037 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	OAF3	P36023	863 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	APM3	P38153	483 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	EAF5	P39995	279 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	SMK1	P41808	388 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	MPP10	P47083	593 aa	Known RBP	2.64	□□□□□ -1.99
SDC1	YDR469W	HOL1	P53389	586 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	CNM67	P53865	581 aa	Known RBP	2.64	□□□□□ -1.99
SDC1	YDR469W	NOP15	P53927	220 aa	Predicted RBP	2.64	□□□□□ -1.99
SDC1	YDR469W	CIA1	Q05583	330 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	YLR352W	Q06479	807 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	PSK2	Q08217	1101 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	CWC2	Q12046	339 aa	Predicted RBP	2.64	□□□□□ -1.99
SDC1	YDR469W	HFI1	Q12060	488 aa		2.64	□□□□□ -1.99
SDC1	YDR469W	HSH49	Q99181	213 aa	Predicted RBP	2.64	□□□□□ -1.99
SDC1	YDR469W	NUC1	P08466	329 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	GLN4	P13188	809 aa	Known RBP	2.63	□□□□□ -1.99
SDC1	YDR469W	MAK32	P23060	363 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	PGS1	P25578	521 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	PET309	P32522	965 aa	Predicted RBP	2.63	□□□□□ -1.99
SDC1	YDR469W	VMA8	P32610	256 aa	Known RBP	2.63	□□□□□ -1.99
SDC1	YDR469W	MUM2	P38236	366 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	VRG4	P40107	337 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	RAD26	P40352	1085 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	CIN1	P40987	1014 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	SAD1	P43589	448 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	MAD3	P47074	515 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	RBG2	P53295	368 aa	Known RBP	2.63	□□□□□ -1.99
SDC1	YDR469W	ARC35	P53731	342 aa	Known RBP	2.63	□□□□□ -1.99
SDC1	YDR469W	RAD33	Q04231	177 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	YCG1	Q06680	1035 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	PFA4	Q12006	378 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	AIM41	Q12032	185 aa		2.63	□□□□□ -1.99
SDC1	YDR469W	RRG1	Q12167	365 aa	Predicted RBP	2.63	□□□□□ -1.99
SDC1	YDR469W	MRP7	P12687	371 aa		2.62	□□□□□ -1.99
SDC1	YDR469W	GUK1	P15454	187 aa	Known RBP	2.62	□□□□□ -1.99
SDC1	YDR469W	CDC60	P26637	1090 aa	Known RBP	2.62	□□□□□ -1.99
SDC1	YDR469W	IMP2'	P32351	346 aa		2.62	□□□□□ -1.99
SDC1	YDR469W	AXL2	P38928	823 aa		2.62	□□□□□ -1.99
SDC1	YDR469W	SPC72	P39723	622 aa		2.62	□□□□□ -1.99
SDC1	YDR469W	KAP123	P40069	1113 aa	Known RBP	2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms