RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C VPS34P22543 875 aa5.09□□□□□ -1.59
NUP42YDR192C SWC3P31376 625 aa5.09□□□□□ -1.59
NUP42YDR192C GLG1P36143 616 aa5.09□□□□□ -1.59
NUP42YDR192C STT3P39007 718 aaKnown RBP5.09□□□□□ -1.59
NUP42YDR192C BDH2P39713 417 aa5.09□□□□□ -1.59
NUP42YDR192C VFA1P40080 203 aa5.09□□□□□ -1.59
NUP42YDR192C CPR6P53691 371 aaKnown RBP5.09□□□□□ -1.59
NUP42YDR192C ARA2Q04212 335 aa5.09□□□□□ -1.59
NUP42YDR192C ARR3Q06598 404 aa5.09□□□□□ -1.59
NUP42YDR192C RKI1Q12189 258 aa5.09□□□□□ -1.59
NUP42YDR192C SAC3P46674 1301 aa5.08□□□□□ -1.6
NUP42YDR192C DBF20P32328 564 aa5.08□□□□□ -1.6
NUP42YDR192C DSS4P32601 143 aa5.08□□□□□ -1.6
NUP42YDR192C LOT5P34234 306 aa5.08□□□□□ -1.6
NUP42YDR192C GMH1P36125 273 aa5.08□□□□□ -1.6
NUP42YDR192C EFR3Q03653 782 aaKnown RBP5.08□□□□□ -1.6
NUP42YDR192C SYF1Q04048 859 aaPredicted RBP5.08□□□□□ -1.6
NUP42YDR192C UBX2Q04228 584 aa5.08□□□□□ -1.6
NUP42YDR192C IRC3Q06683 689 aa5.08□□□□□ -1.6
NUP42YDR192C IWR1Q07532 353 aaPredicted RBP5.08□□□□□ -1.6
NUP42YDR192C LSP1Q12230 341 aaKnown RBP5.08□□□□□ -1.6
NUP42YDR192C RRI2Q12348 645 aa5.08□□□□□ -1.6
NUP42YDR192C RNR2P09938 399 aaKnown RBP5.07□□□□□ -1.6
NUP42YDR192C SEC18P18759 758 aaKnown RBP5.07□□□□□ -1.6
NUP42YDR192C CDC43P18898 376 aa5.07□□□□□ -1.6
NUP42YDR192C OPI1P21957 404 aa5.07□□□□□ -1.6
NUP42YDR192C MCM3P24279 971 aaKnown RBP5.07□□□□□ -1.6
NUP42YDR192C DMC1P25453 334 aa5.07□□□□□ -1.6
NUP42YDR192C XRS2P33301 854 aa5.07□□□□□ -1.6
NUP42YDR192C OAR1P35731 278 aa5.07□□□□□ -1.6
NUP42YDR192C ELF1P36053 145 aa5.07□□□□□ -1.6
NUP42YDR192C SET3P36124 751 aa5.07□□□□□ -1.6
NUP42YDR192C MRPL7P36519 292 aa5.07□□□□□ -1.6
NUP42YDR192C MRPL36P36531 177 aa5.07□□□□□ -1.6
NUP42YDR192C KSP1P38691 1029 aaKnown RBP5.07□□□□□ -1.6
NUP42YDR192C DIP5P53388 608 aa5.07□□□□□ -1.6
NUP42YDR192C TRS31Q03337 283 aa5.07□□□□□ -1.6
NUP42YDR192C YMR206WQ03695 313 aa5.07□□□□□ -1.6
NUP42YDR192C ENT2Q05785 613 aa5.07□□□□□ -1.6
NUP42YDR192C YPL216WQ08964 1102 aa5.07□□□□□ -1.6
NUP42YDR192C POL3P15436 1097 aa5.06□□□□□ -1.6
NUP42YDR192C YHR097CP38809 366 aaKnown RBP5.06□□□□□ -1.6
NUP42YDR192C SPO22P40511 975 aa5.06□□□□□ -1.6
NUP42YDR192C POL31P46957 487 aa5.06□□□□□ -1.6
NUP42YDR192C IDS2P46958 469 aa5.06□□□□□ -1.6
NUP42YDR192C MOT3P54785 490 aaKnown RBP5.06□□□□□ -1.6
NUP42YDR192C MFM1Q02783 413 aa5.06□□□□□ -1.6
NUP42YDR192C NGL2Q03264 515 aaKnown RBP5.06□□□□□ -1.6
NUP42YDR192C ETT1Q08421 412 aaKnown RBP5.06□□□□□ -1.6
NUP42YDR192C TGS1Q12052 315 aa5.06□□□□□ -1.6
NUP42YDR192C PNS1Q12412 539 aa5.06□□□□□ -1.6
NUP42YDR192C RIM15P43565 1770 aa5.06□□□□□ -1.6
NUP42YDR192C BET2P20133 325 aa5.05□□□□□ -1.6
NUP42YDR192C PFF1P38244 976 aa5.05□□□□□ -1.6
NUP42YDR192C NPR3P38742 1146 aa5.05□□□□□ -1.6
NUP42YDR192C PIH1P38768 344 aa5.05□□□□□ -1.6
NUP42YDR192C SPC72P39723 622 aa5.05□□□□□ -1.6
NUP42YDR192C SDS3P40505 327 aa5.05□□□□□ -1.6
NUP42YDR192C CAB2P40506 365 aa5.05□□□□□ -1.6
NUP42YDR192C YDL073WQ07454 984 aa5.05□□□□□ -1.6
NUP42YDR192C PSK2Q08217 1101 aa5.05□□□□□ -1.6
NUP42YDR192C TOM1Q03280 3268 aa5.05□□□□□ -1.6
NUP42YDR192C YIL177CP40434 1758 aa5.04□□□□□ -1.6
NUP42YDR192C YJL225CP40889 1758 aa5.04□□□□□ -1.6
NUP42YDR192C CYB2P00175 591 aa5.04□□□□□ -1.6
NUP42YDR192C APA1P16550 321 aaKnown RBP5.04□□□□□ -1.6
NUP42YDR192C FRD1P32614 470 aaKnown RBP5.04□□□□□ -1.6
NUP42YDR192C CCL1P37366 393 aa5.04□□□□□ -1.6
NUP42YDR192C MOH1P38191 138 aa5.04□□□□□ -1.6
NUP42YDR192C YJL206CP39529 758 aa5.04□□□□□ -1.6
NUP42YDR192C RPT2P40327 437 aaKnown RBP5.04□□□□□ -1.6
NUP42YDR192C PMT6P42934 759 aa5.04□□□□□ -1.6
NUP42YDR192C IML2P47031 731 aa5.04□□□□□ -1.6
NUP42YDR192C STB4P50104 949 aa5.04□□□□□ -1.6
NUP42YDR192C IMA1P53051 589 aa5.04□□□□□ -1.6
NUP42YDR192C NMA2P53204 395 aa5.04□□□□□ -1.6
NUP42YDR192C SPC98P53540 846 aa5.04□□□□□ -1.6
NUP42YDR192C SNF12P53628 566 aa5.04□□□□□ -1.6
NUP42YDR192C MUK1Q02866 612 aa5.04□□□□□ -1.6
NUP42YDR192C ATG21Q02887 496 aa5.04□□□□□ -1.6
NUP42YDR192C USA1Q03714 838 aa5.04□□□□□ -1.6
NUP42YDR192C HOF1Q05080 669 aa5.04□□□□□ -1.6
NUP42YDR192C CTI6Q08923 506 aa5.04□□□□□ -1.6
NUP42YDR192C TAF3Q12297 353 aa5.04□□□□□ -1.6
NUP42YDR192C KIN3P22209 435 aa5.03□□□□□ -1.6
NUP42YDR192C YCL049CP25577 312 aa5.03□□□□□ -1.6
NUP42YDR192C PSY4P38193 441 aa5.03□□□□□ -1.6
NUP42YDR192C OPY1P38271 328 aa5.03□□□□□ -1.6
NUP42YDR192C FSH1P38777 243 aaKnown RBP5.03□□□□□ -1.6
NUP42YDR192C RAD26P40352 1085 aa5.03□□□□□ -1.6
NUP42YDR192C MRPL13Q02204 264 aa5.03□□□□□ -1.6
NUP42YDR192C YPL108WQ02872 168 aaPredicted RBP5.03□□□□□ -1.6
NUP42YDR192C YDR179W-AQ03983 463 aa5.03□□□□□ -1.6
NUP42YDR192C RIM20Q12033 661 aa5.03□□□□□ -1.6
NUP42YDR192C LAM4P38800 1345 aa5.02□□□□□ -1.61
NUP42YDR192C YLR278CQ05854 1341 aa5.02□□□□□ -1.61
NUP42YDR192C MTF2P10849 440 aa5.02□□□□□ -1.61
NUP42YDR192C BIK1P11709 440 aa5.02□□□□□ -1.61
NUP42YDR192C PCT1P13259 424 aa5.02□□□□□ -1.61
NUP42YDR192C RIT1P23796 513 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 562.9 ms