RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeast

Gene RUB1, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUB1	YDR139C	URK1	P27515	501 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	YBR138C	P38277	524 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	FTH1	P38310	465 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	RPT2	P40327	437 aa	Known RBP	4.07	□□□□□ -1.76
RUB1	YDR139C	SNO3	P43544	222 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	TAM41	P53230	385 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	RTS3	P53289	263 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	ERG13	P54839	491 aa	Known RBP	4.07	□□□□□ -1.76
RUB1	YDR139C	YAT1	P80235	687 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	MTG1	Q03151	367 aa	Predicted RBP	4.07	□□□□□ -1.76
RUB1	YDR139C	BLS1	Q06071	122 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	RAD34	Q06665	692 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	YOR389W	Q08912	624 aa		4.07	□□□□□ -1.76
RUB1	YDR139C	CET1	O13297	549 aa	Predicted RBP	4.06	□□□□□ -1.76
RUB1	YDR139C	ILV2	P07342	687 aa	Known RBP	4.06	□□□□□ -1.76
RUB1	YDR139C	MRPL36	P36531	177 aa		4.06	□□□□□ -1.76
RUB1	YDR139C	ZAP1	P47043	880 aa		4.06	□□□□□ -1.76
RUB1	YDR139C	UBX6	P47049	396 aa		4.06	□□□□□ -1.76
RUB1	YDR139C	NPA3	P47122	385 aa		4.06	□□□□□ -1.76
RUB1	YDR139C	YGR079W	P53249	370 aa		4.06	□□□□□ -1.76
RUB1	YDR139C	IDP3	P53982	420 aa	Known RBP	4.06	□□□□□ -1.76
RUB1	YDR139C	VMS1	Q04311	632 aa	Known RBP	4.06	□□□□□ -1.76
RUB1	YDR139C	LYS21	Q12122	440 aa	Known RBP	4.06	□□□□□ -1.76
RUB1	YDR139C	NCP1	P16603	691 aa	Known RBP	4.05	□□□□□ -1.76
RUB1	YDR139C	MAK32	P23060	363 aa		4.05	□□□□□ -1.76
RUB1	YDR139C	YCL049C	P25577	312 aa		4.05	□□□□□ -1.76
RUB1	YDR139C	LAC1	P28496	418 aa		4.05	□□□□□ -1.76
RUB1	YDR139C	HES1	P35843	434 aa		4.05	□□□□□ -1.76
RUB1	YDR139C	NPR3	P38742	1146 aa		4.05	□□□□□ -1.76
RUB1	YDR139C	PSA1	P41940	361 aa	Known RBP	4.05	□□□□□ -1.76
RUB1	YDR139C	NET1	P47035	1189 aa		4.05	□□□□□ -1.76
RUB1	YDR139C	COX1	P00401	534 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	NUC1	P08466	329 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	ILS1	P09436	1072 aa	Known RBP	4.04	□□□□□ -1.76
RUB1	YDR139C	DBF20	P32328	564 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	IMD2	P38697	523 aa	Known RBP	4.04	□□□□□ -1.76
RUB1	YDR139C	PSF2	P40359	213 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	ERR3	P42222	437 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	IRC7	P43623	340 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	IMD3	P50095	523 aa	Known RBP	4.04	□□□□□ -1.76
RUB1	YDR139C	MRPL13	Q02204	264 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	RSC9	Q03124	581 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	SNU56	Q03782	492 aa	Known RBP	4.04	□□□□□ -1.76
RUB1	YDR139C	CIA1	Q05583	330 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	ATG23	Q06671	453 aa		4.04	□□□□□ -1.76
RUB1	YDR139C	PTC6	P25646	442 aa		4.03	□□□□□ -1.76
RUB1	YDR139C	MRS6	P32864	603 aa	Known RBP	4.03	□□□□□ -1.76
RUB1	YDR139C	NUP120	P35729	1037 aa		4.03	□□□□□ -1.76
RUB1	YDR139C	VPS24	P36095	224 aa	Known RBP	4.03	□□□□□ -1.76
RUB1	YDR139C	BUD16	P39988	312 aa		4.03	□□□□□ -1.76
RUB1	YDR139C	DJP1	P40564	432 aa		4.03	□□□□□ -1.76
RUB1	YDR139C	SAP185	P40856	1058 aa		4.03	□□□□□ -1.76
RUB1	YDR139C	YRB30	P53107	440 aa	Predicted RBP	4.03	□□□□□ -1.76
RUB1	YDR139C	ARC35	P53731	342 aa	Known RBP	4.03	□□□□□ -1.76
RUB1	YDR139C	ATG16	Q03818	150 aa		4.03	□□□□□ -1.76
RUB1	YDR139C	VAM6	Q07468	1049 aa		4.03	□□□□□ -1.76
RUB1	YDR139C	LEA1	Q08963	238 aa	Predicted RBP	4.03	□□□□□ -1.76
RUB1	YDR139C	PRS5	Q12265	496 aa	Known RBP	4.03	□□□□□ -1.76
RUB1	YDR139C	MTF2	P10849	440 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	LRE1	P25579	583 aa	Known RBP	4.02	□□□□□ -1.77
RUB1	YDR139C	PWP2	P25635	923 aa	Known RBP	4.02	□□□□□ -1.77
RUB1	YDR139C	GSH1	P32477	678 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	XRS2	P33301	854 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	YIL161W	P40449	235 aa	Known RBP	4.02	□□□□□ -1.77
RUB1	YDR139C	CIN1	P40987	1014 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	YDR109C	Q04585	715 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	PSR2	Q07949	397 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	AFT2	Q08957	416 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	BAG7	Q12128	409 aa		4.02	□□□□□ -1.77
RUB1	YDR139C	SPO16	P17122	198 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	UBC1	P21734	215 aa	Known RBP	4.01	□□□□□ -1.77
RUB1	YDR139C	IES5	P40060	125 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	SMK1	P41808	388 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	MSY1	P48527	492 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	STP1	Q00947	519 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	CSR1	Q06705	408 aa	Known RBP	4.01	□□□□□ -1.77
RUB1	YDR139C	THI3	Q07471	609 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	SWT1	Q12104	458 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	CRC1	Q12289	327 aa		4.01	□□□□□ -1.77
RUB1	YDR139C	ATP2	P00830	511 aa	Known RBP	4	□□□□□ -1.77
RUB1	YDR139C	YMR085W	P0CF18	432 aa		4	□□□□□ -1.77
RUB1	YDR139C	RFA2	P26754	273 aa	Known RBP	4	□□□□□ -1.77
RUB1	YDR139C	COQ3	P27680	312 aa		4	□□□□□ -1.77
RUB1	YDR139C	RAD16	P31244	790 aa		4	□□□□□ -1.77
RUB1	YDR139C	ERV46	P39727	415 aa		4	□□□□□ -1.77
RUB1	YDR139C	PHM8	P40025	321 aa		4	□□□□□ -1.77
RUB1	YDR139C	UBP7	P40453	1071 aa		4	□□□□□ -1.77
RUB1	YDR139C	ORC5	P50874	479 aa		4	□□□□□ -1.77
RUB1	YDR139C	STP3	Q05937	343 aa		4	□□□□□ -1.77
RUB1	YDR139C	COX17	Q12287	69 aa		4	□□□□□ -1.77
RUB1	YDR139C	SSM4	P40318	1319 aa		3.99	□□□□□ -1.77
RUB1	YDR139C	TPK1	P06244	397 aa		3.99	□□□□□ -1.77
RUB1	YDR139C	YML003W	P0CF16	290 aa		3.99	□□□□□ -1.77
RUB1	YDR139C	YAP1	P19880	650 aa	Known RBP	3.99	□□□□□ -1.77
RUB1	YDR139C	MSS51	P32335	436 aa		3.99	□□□□□ -1.77
RUB1	YDR139C	COP1	P53622	1201 aa	Known RBP	3.99	□□□□□ -1.77
RUB1	YDR139C	CSL4	P53859	292 aa	Predicted RBP	3.99	□□□□□ -1.77
RUB1	YDR139C	GET3	Q12154	354 aa	Known RBP	3.99	□□□□□ -1.77
RUB1	YDR139C	PSY4	P38193	441 aa		3.98	□□□□□ -1.77
RUB1	YDR139C	FUI1	P38196	639 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms