RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W MAK10Q02197 733 aa5.68□□□□□ -1.5
FOB1YDR110W NGL3Q03210 505 aa5.68□□□□□ -1.5
FOB1YDR110W EFR3Q03653 782 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W ECM11Q04110 302 aa5.68□□□□□ -1.5
FOB1YDR110W UTP5Q04177 643 aaKnown RBP5.68□□□□□ -1.5
FOB1YDR110W MRPL1Q04599 285 aa5.68□□□□□ -1.5
FOB1YDR110W YLR413WQ06689 675 aa5.68□□□□□ -1.5
FOB1YDR110W LUC7Q07508 261 aaPredicted RBP5.68□□□□□ -1.5
FOB1YDR110W RKM1Q08961 583 aaPredicted RBP5.68□□□□□ -1.5
FOB1YDR110W FMP40Q08968 688 aaPredicted RBP5.68□□□□□ -1.5
FOB1YDR110W CWC2Q12046 339 aaPredicted RBP5.68□□□□□ -1.5
FOB1YDR110W SRN2Q99176 213 aa5.68□□□□□ -1.5
FOB1YDR110W BET2P20133 325 aa5.67□□□□□ -1.5
FOB1YDR110W AAR2P32357 355 aaPredicted RBP5.67□□□□□ -1.5
FOB1YDR110W ERG1P32476 496 aaKnown RBP5.67□□□□□ -1.5
FOB1YDR110W FRD1P32614 470 aaKnown RBP5.67□□□□□ -1.5
FOB1YDR110W CTF13P35203 478 aa5.67□□□□□ -1.5
FOB1YDR110W LDH1P38139 375 aa5.67□□□□□ -1.5
FOB1YDR110W YHR054CP38780 354 aa5.67□□□□□ -1.5
FOB1YDR110W YEL057CP39983 233 aa5.67□□□□□ -1.5
FOB1YDR110W MSS2P40990 351 aa5.67□□□□□ -1.5
FOB1YDR110W IAH1P41734 238 aa5.67□□□□□ -1.5
FOB1YDR110W YGR283CP53336 341 aaPredicted RBP5.67□□□□□ -1.5
FOB1YDR110W YSA1Q01976 231 aa5.67□□□□□ -1.5
FOB1YDR110W MEC3Q02574 474 aa5.67□□□□□ -1.5
FOB1YDR110W RLI1Q03195 608 aaKnown RBP5.67□□□□□ -1.5
FOB1YDR110W GIS4Q04233 774 aa5.67□□□□□ -1.5
FOB1YDR110W SEG1Q04279 960 aa5.67□□□□□ -1.5
FOB1YDR110W HBT1Q07653 1046 aaKnown RBP5.67□□□□□ -1.5
FOB1YDR110W CTI6Q08923 506 aa5.67□□□□□ -1.5
FOB1YDR110W SEN2P16658 377 aa5.66□□□□□ -1.5
FOB1YDR110W YPK2P18961 677 aa5.66□□□□□ -1.5
FOB1YDR110W PWP1P21304 576 aaKnown RBP5.66□□□□□ -1.5
FOB1YDR110W APA2P22108 325 aa5.66□□□□□ -1.5
FOB1YDR110W BOS1P25385 244 aa5.66□□□□□ -1.5
FOB1YDR110W PER1P25625 357 aa5.66□□□□□ -1.5
FOB1YDR110W DCW1P36091 449 aa5.66□□□□□ -1.5
FOB1YDR110W SRO77P38163 1010 aa5.66□□□□□ -1.5
FOB1YDR110W ALG3P38179 458 aa5.66□□□□□ -1.5
FOB1YDR110W UME6P39001 836 aa5.66□□□□□ -1.5
FOB1YDR110W PRM9P39551 298 aa5.66□□□□□ -1.5
FOB1YDR110W PSP1P50896 841 aaKnown RBP5.66□□□□□ -1.5
FOB1YDR110W MCM6P53091 1017 aaKnown RBP5.66□□□□□ -1.5
FOB1YDR110W FUS2Q05670 677 aa5.66□□□□□ -1.5
FOB1YDR110W BCP1Q06338 283 aa5.66□□□□□ -1.5
FOB1YDR110W TGS1Q12052 315 aa5.66□□□□□ -1.5
FOB1YDR110W YSP2Q06681 1438 aa5.66□□□□□ -1.5
FOB1YDR110W CHC1P22137 1653 aaKnown RBP5.66□□□□□ -1.5
FOB1YDR110W DED1P06634 604 aaKnown RBP5.65□□□□□ -1.5
FOB1YDR110W SEC53P07283 254 aaKnown RBP5.65□□□□□ -1.5
FOB1YDR110W PRE8P23639 250 aa5.65□□□□□ -1.5
FOB1YDR110W BUD5P25300 642 aaPredicted RBP5.65□□□□□ -1.5
FOB1YDR110W VAC17P25591 423 aa5.65□□□□□ -1.5
FOB1YDR110W CRM1P30822 1084 aaKnown RBP5.65□□□□□ -1.5
FOB1YDR110W EFT1P32324 842 aaKnown RBP5.65□□□□□ -1.5
FOB1YDR110W HXT1P32465 570 aa5.65□□□□□ -1.5
FOB1YDR110W SUA5P32579 426 aa5.65□□□□□ -1.5
FOB1YDR110W MAC1P35192 417 aa5.65□□□□□ -1.5
FOB1YDR110W UGA2P38067 497 aa5.65□□□□□ -1.5
FOB1YDR110W SMF1P38925 575 aa5.65□□□□□ -1.5
FOB1YDR110W STT3P39007 718 aaKnown RBP5.65□□□□□ -1.5
FOB1YDR110W RTR1P40084 226 aaPredicted RBP5.65□□□□□ -1.5
FOB1YDR110W YTA12P40341 825 aa5.65□□□□□ -1.5
FOB1YDR110W UBC9P50623 157 aaPredicted RBP5.65□□□□□ -1.5
FOB1YDR110W DCP2P53550 970 aaKnown RBP5.65□□□□□ -1.5
FOB1YDR110W GCR2Q01722 534 aa5.65□□□□□ -1.5
FOB1YDR110W RSN1Q03516 953 aa5.65□□□□□ -1.5
FOB1YDR110W PEX19Q07418 342 aa5.65□□□□□ -1.5
FOB1YDR110W DSE3Q08729 430 aa5.65□□□□□ -1.5
FOB1YDR110W LAG2Q92325 660 aa5.65□□□□□ -1.5
FOB1YDR110W PHO5P00635 467 aa5.65□□□□□ -1.51
FOB1YDR110W PDC1P06169 563 aaKnown RBP5.65□□□□□ -1.51
FOB1YDR110W CPR2P23285 205 aa5.65□□□□□ -1.51
FOB1YDR110W OCA4P25366 362 aa5.65□□□□□ -1.51
FOB1YDR110W YCR051WP25631 222 aa5.65□□□□□ -1.51
FOB1YDR110W PDC6P26263 563 aaKnown RBP5.65□□□□□ -1.51
FOB1YDR110W ICL1P28240 557 aaPredicted RBP5.65□□□□□ -1.51
FOB1YDR110W NUP133P36161 1157 aa5.65□□□□□ -1.51
FOB1YDR110W MRPL37P36532 105 aa5.65□□□□□ -1.51
FOB1YDR110W ADE17P38009 592 aaKnown RBP5.65□□□□□ -1.51
FOB1YDR110W VMA13P41807 478 aaKnown RBP5.65□□□□□ -1.51
FOB1YDR110W YRB1P41920 201 aaKnown RBP5.65□□□□□ -1.51
FOB1YDR110W YDL183CP48569 320 aa5.65□□□□□ -1.51
FOB1YDR110W MNT2P53059 558 aa5.65□□□□□ -1.51
FOB1YDR110W PGA2P53903 129 aa5.65□□□□□ -1.51
FOB1YDR110W ESBP6P53918 673 aa5.65□□□□□ -1.51
FOB1YDR110W ARX1Q03862 593 aaKnown RBP5.65□□□□□ -1.51
FOB1YDR110W VAC14Q06708 880 aa5.65□□□□□ -1.51
FOB1YDR110W ABP140Q08641 628 aaKnown RBP5.65□□□□□ -1.51
FOB1YDR110W YOR296WQ08748 1289 aa5.65□□□□□ -1.51
FOB1YDR110W ULA1Q12059 462 aa5.65□□□□□ -1.51
FOB1YDR110W HUA2Q12134 243 aa5.65□□□□□ -1.51
FOB1YDR110W ZRT2Q12436 422 aa5.65□□□□□ -1.51
FOB1YDR110W SKM1Q12469 655 aa5.65□□□□□ -1.51
FOB1YDR110W YBR126W-AQ8TGU7 68 aa5.65□□□□□ -1.51
FOB1YDR110W RPL1AP0CX43 217 aaKnown RBP5.64□□□□□ -1.51
FOB1YDR110W RPL1BP0CX44 217 aaKnown RBP5.64□□□□□ -1.51
FOB1YDR110W PRP2P20095 876 aaPredicted RBP5.64□□□□□ -1.51
FOB1YDR110W SWI4P25302 1093 aaKnown RBP5.64□□□□□ -1.51
FOB1YDR110W IMG2P25642 146 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms