RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C ARC1P46672 376 aaKnown RBP4.43□□□□□ -1.7
SHU2YDR078C VPS4P52917 437 aa4.43□□□□□ -1.7
SHU2YDR078C YMR206WQ03695 313 aa4.43□□□□□ -1.7
SHU2YDR078C STP3Q05937 343 aa4.43□□□□□ -1.7
SHU2YDR078C TMA16Q08687 178 aa4.43□□□□□ -1.7
SHU2YDR078C SWT1Q12104 458 aa4.43□□□□□ -1.7
SHU2YDR078C ACF2Q12168 779 aa4.43□□□□□ -1.7
SHU2YDR078C SKM1Q12469 655 aa4.43□□□□□ -1.7
SHU2YDR078C MRP7P12687 371 aa4.42□□□□□ -1.7
SHU2YDR078C YPK1P12688 680 aaKnown RBP4.42□□□□□ -1.7
SHU2YDR078C LRE1P25579 583 aaKnown RBP4.42□□□□□ -1.7
SHU2YDR078C TDP1P38319 544 aa4.42□□□□□ -1.7
SHU2YDR078C LYS14P40971 790 aa4.42□□□□□ -1.7
SHU2YDR078C CCT7P42943 550 aaKnown RBP4.42□□□□□ -1.7
SHU2YDR078C IMO32P53219 342 aa4.42□□□□□ -1.7
SHU2YDR078C YNL092WP53934 400 aa4.42□□□□□ -1.7
SHU2YDR078C ATG23Q06671 453 aa4.42□□□□□ -1.7
SHU2YDR078C HBT1Q07653 1046 aaKnown RBP4.42□□□□□ -1.7
SHU2YDR078C CRT10Q08226 957 aa4.42□□□□□ -1.7
SHU2YDR078C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SHU2YDR078C RVB2Q12464 471 aaKnown RBP4.42□□□□□ -1.7
SHU2YDR078C VCX1Q99385 411 aa4.42□□□□□ -1.7
SHU2YDR078C YML003WP0CF16 290 aa4.41□□□□□ -1.7
SHU2YDR078C RPL19AP0CX82 189 aaKnown RBP4.41□□□□□ -1.7
SHU2YDR078C RPL19BP0CX83 189 aaPredicted RBP4.41□□□□□ -1.7
SHU2YDR078C CDC24P11433 854 aaPredicted RBP4.41□□□□□ -1.7
SHU2YDR078C MET8P15807 274 aa4.41□□□□□ -1.7
SHU2YDR078C ERG8P24521 451 aa4.41□□□□□ -1.7
SHU2YDR078C SAC6P32599 642 aaKnown RBP4.41□□□□□ -1.7
SHU2YDR078C OAR1P35731 278 aa4.41□□□□□ -1.7
SHU2YDR078C ESL2P36168 1195 aa4.41□□□□□ -1.7
SHU2YDR078C MOH1P38191 138 aa4.41□□□□□ -1.7
SHU2YDR078C MIT1P40002 666 aa4.41□□□□□ -1.7
SHU2YDR078C MAM1P40065 302 aa4.41□□□□□ -1.7
SHU2YDR078C YGR079WP53249 370 aa4.41□□□□□ -1.7
SHU2YDR078C COQ6P53318 479 aa4.41□□□□□ -1.7
SHU2YDR078C TIM44Q01852 431 aa4.41□□□□□ -1.7
SHU2YDR078C NUS1Q12063 375 aa4.41□□□□□ -1.7
SHU2YDR078C PRS5Q12265 496 aaKnown RBP4.41□□□□□ -1.7
SHU2YDR078C TAF3Q12297 353 aa4.41□□□□□ -1.7
SHU2YDR078C ERG27Q12452 347 aaKnown RBP4.41□□□□□ -1.7
SHU2YDR078C RNR3P21672 869 aaKnown RBP4.4□□□□□ -1.71
SHU2YDR078C AMD2P22580 549 aa4.4□□□□□ -1.71
SHU2YDR078C CMK1P27466 446 aaKnown RBP4.4□□□□□ -1.71
SHU2YDR078C NOP4P37838 685 aaKnown RBP4.4□□□□□ -1.71
SHU2YDR078C LAS21P40367 830 aa4.4□□□□□ -1.71
SHU2YDR078C YSA1Q01976 231 aa4.4□□□□□ -1.71
SHU2YDR078C YML119WQ03208 357 aa4.4□□□□□ -1.71
SHU2YDR078C GIR2Q03768 265 aaPredicted RBP4.4□□□□□ -1.71
SHU2YDR078C MRI1Q06489 411 aaKnown RBP4.4□□□□□ -1.71
SHU2YDR078C YDL242WQ07746 117 aa4.4□□□□□ -1.71
SHU2YDR078C PSK2Q08217 1101 aa4.4□□□□□ -1.71
SHU2YDR078C MDM20Q12387 796 aaKnown RBP4.4□□□□□ -1.71
SHU2YDR078C CPA2P03965 1118 aaKnown RBP4.39□□□□□ -1.71
SHU2YDR078C CHO2P05374 869 aaKnown RBP4.39□□□□□ -1.71
SHU2YDR078C WHI2P12611 486 aa4.39□□□□□ -1.71
SHU2YDR078C TFC3P34111 1160 aa4.39□□□□□ -1.71
SHU2YDR078C YMC2P38087 329 aa4.39□□□□□ -1.71
SHU2YDR078C PFK26P40433 827 aaKnown RBP4.39□□□□□ -1.71
SHU2YDR078C UBP7P40453 1071 aa4.39□□□□□ -1.71
SHU2YDR078C AAD10P47182 288 aa4.39□□□□□ -1.71
SHU2YDR078C STB4P50104 949 aa4.39□□□□□ -1.71
SHU2YDR078C DUO1P53168 247 aaKnown RBP4.39□□□□□ -1.71
SHU2YDR078C RBG2P53295 368 aaKnown RBP4.39□□□□□ -1.71
SHU2YDR078C UBP16Q02863 499 aa4.39□□□□□ -1.71
SHU2YDR078C VIP1Q06685 1146 aaKnown RBP4.39□□□□□ -1.71
SHU2YDR078C LCB4Q12246 624 aa4.39□□□□□ -1.71
SHU2YDR078C ZPS1Q12512 249 aa4.39□□□□□ -1.71
SHU2YDR078C YOR111WQ99210 232 aa4.39□□□□□ -1.71
SHU2YDR078C OLE1P21147 510 aaKnown RBP4.38□□□□□ -1.71
SHU2YDR078C SGF29P25554 259 aa4.38□□□□□ -1.71
SHU2YDR078C SIP1P32578 815 aa4.38□□□□□ -1.71
SHU2YDR078C GDA1P32621 518 aa4.38□□□□□ -1.71
SHU2YDR078C ALY1P36117 915 aa4.38□□□□□ -1.71
SHU2YDR078C RPF2P36160 344 aaKnown RBP4.38□□□□□ -1.71
SHU2YDR078C ERC1P38767 581 aa4.38□□□□□ -1.71
SHU2YDR078C MTG2P38860 518 aa4.38□□□□□ -1.71
SHU2YDR078C SDS3P40505 327 aa4.38□□□□□ -1.71
SHU2YDR078C DJP1P40564 432 aa4.38□□□□□ -1.71
SHU2YDR078C CPR8P53728 308 aa4.38□□□□□ -1.71
SHU2YDR078C YNR061CP53747 219 aa4.38□□□□□ -1.71
SHU2YDR078C TIM10P87108 93 aa4.38□□□□□ -1.71
SHU2YDR078C GFD1Q04839 188 aaKnown RBP4.38□□□□□ -1.71
SHU2YDR078C ENT4Q07872 247 aa4.38□□□□□ -1.71
SHU2YDR078C Q0010Q9ZZX9 128 aa4.38□□□□□ -1.71
SHU2YDR078C TPK2P06245 380 aa4.37□□□□□ -1.71
SHU2YDR078C PRE8P23639 250 aa4.37□□□□□ -1.71
SHU2YDR078C RFA2P26754 273 aaKnown RBP4.37□□□□□ -1.71
SHU2YDR078C SRB5P32585 307 aa4.37□□□□□ -1.71
SHU2YDR078C FUN12P39730 1002 aaKnown RBP4.37□□□□□ -1.71
SHU2YDR078C IRC6P43615 237 aa4.37□□□□□ -1.71
SHU2YDR078C NPA3P47122 385 aa4.37□□□□□ -1.71
SHU2YDR078C YGL117WP53133 265 aa4.37□□□□□ -1.71
SHU2YDR078C PIL1P53252 339 aaKnown RBP4.37□□□□□ -1.71
SHU2YDR078C MUB1Q03162 620 aa4.37□□□□□ -1.71
SHU2YDR078C RAD30Q04049 632 aa4.37□□□□□ -1.71
SHU2YDR078C TDA9Q04545 1251 aa4.37□□□□□ -1.71
SHU2YDR078C PCL8Q08966 492 aa4.37□□□□□ -1.71
SHU2YDR078C BAG7Q12128 409 aa4.37□□□□□ -1.71
SHU2YDR078C HUA2Q12134 243 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms