RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI1	YDL216C	RVB2	Q12464	471 aa	Known RBP	4.88	□□□□□ -1.63
RRI1	YDL216C	CET1	O13297	549 aa	Predicted RBP	4.87	□□□□□ -1.63
RRI1	YDL216C	PTP1	P25044	335 aa		4.87	□□□□□ -1.63
RRI1	YDL216C	FTH1	P38310	465 aa		4.87	□□□□□ -1.63
RRI1	YDL216C	NPR3	P38742	1146 aa		4.87	□□□□□ -1.63
RRI1	YDL216C	RPT2	P40327	437 aa	Known RBP	4.87	□□□□□ -1.63
RRI1	YDL216C	ERG13	P54839	491 aa	Known RBP	4.87	□□□□□ -1.63
RRI1	YDL216C	MTG1	Q03151	367 aa	Predicted RBP	4.87	□□□□□ -1.63
RRI1	YDL216C	VMS1	Q04311	632 aa	Known RBP	4.87	□□□□□ -1.63
RRI1	YDL216C	RAD34	Q06665	692 aa		4.87	□□□□□ -1.63
RRI1	YDL216C	FRE7	Q12333	620 aa		4.87	□□□□□ -1.63
RRI1	YDL216C	RTC1	Q08281	1341 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	ILV2	P07342	687 aa	Known RBP	4.86	□□□□□ -1.63
RRI1	YDL216C	MAK32	P23060	363 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	URK1	P27515	501 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	YBR138C	P38277	524 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	PSA1	P41940	361 aa	Known RBP	4.86	□□□□□ -1.63
RRI1	YDL216C	UBX6	P47049	396 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	NPA3	P47122	385 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	YGR079W	P53249	370 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	RTS3	P53289	263 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	IDP3	P53982	420 aa	Known RBP	4.86	□□□□□ -1.63
RRI1	YDL216C	BLS1	Q06071	122 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	ATG23	Q06671	453 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	YOR389W	Q08912	624 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	LYS21	Q12122	440 aa	Known RBP	4.86	□□□□□ -1.63
RRI1	YDL216C	ICT1	Q12385	394 aa		4.86	□□□□□ -1.63
RRI1	YDL216C	YCL049C	P25577	312 aa		4.85	□□□□□ -1.63
RRI1	YDL216C	LAC1	P28496	418 aa		4.85	□□□□□ -1.63
RRI1	YDL216C	HES1	P35843	434 aa		4.85	□□□□□ -1.63
RRI1	YDL216C	ZAP1	P47043	880 aa		4.85	□□□□□ -1.63
RRI1	YDL216C	TAM41	P53230	385 aa		4.85	□□□□□ -1.63
RRI1	YDL216C	COX1	P00401	534 aa		4.84	□□□□□ -1.63
RRI1	YDL216C	ILS1	P09436	1072 aa	Known RBP	4.84	□□□□□ -1.63
RRI1	YDL216C	APA1	P16550	321 aa	Known RBP	4.84	□□□□□ -1.63
RRI1	YDL216C	NUP120	P35729	1037 aa		4.84	□□□□□ -1.63
RRI1	YDL216C	PSF2	P40359	213 aa		4.84	□□□□□ -1.63
RRI1	YDL216C	IRC7	P43623	340 aa		4.84	□□□□□ -1.63
RRI1	YDL216C	NET1	P47035	1189 aa		4.84	□□□□□ -1.63
RRI1	YDL216C	YRB30	P53107	440 aa	Predicted RBP	4.84	□□□□□ -1.63
RRI1	YDL216C	RSC9	Q03124	581 aa		4.84	□□□□□ -1.63
RRI1	YDL216C	MTF2	P10849	440 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	NCP1	P16603	691 aa	Known RBP	4.83	□□□□□ -1.64
RRI1	YDL216C	PTC6	P25646	442 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	DBF20	P32328	564 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	BUD16	P39988	312 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	DJP1	P40564	432 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	MRPL13	Q02204	264 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	SNU56	Q03782	492 aa	Known RBP	4.83	□□□□□ -1.64
RRI1	YDL216C	CIA1	Q05583	330 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	PSR2	Q07949	397 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	YAP7	Q08182	245 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	LEA1	Q08963	238 aa	Predicted RBP	4.83	□□□□□ -1.64
RRI1	YDL216C	BAG7	Q12128	409 aa		4.83	□□□□□ -1.64
RRI1	YDL216C	NUC1	P08466	329 aa		4.82	□□□□□ -1.64
RRI1	YDL216C	LRE1	P25579	583 aa	Known RBP	4.82	□□□□□ -1.64
RRI1	YDL216C	PWP2	P25635	923 aa	Known RBP	4.82	□□□□□ -1.64
RRI1	YDL216C	MRS6	P32864	603 aa	Known RBP	4.82	□□□□□ -1.64
RRI1	YDL216C	XRS2	P33301	854 aa		4.82	□□□□□ -1.64
RRI1	YDL216C	IMD2	P38697	523 aa	Known RBP	4.82	□□□□□ -1.64
RRI1	YDL216C	SAP185	P40856	1058 aa		4.82	□□□□□ -1.64
RRI1	YDL216C	CIN1	P40987	1014 aa		4.82	□□□□□ -1.64
RRI1	YDL216C	ERR3	P42222	437 aa		4.82	□□□□□ -1.64
RRI1	YDL216C	IMD3	P50095	523 aa	Known RBP	4.82	□□□□□ -1.64
RRI1	YDL216C	ATG16	Q03818	150 aa		4.82	□□□□□ -1.64
RRI1	YDL216C	VAM6	Q07468	1049 aa		4.82	□□□□□ -1.64
RRI1	YDL216C	PRS5	Q12265	496 aa	Known RBP	4.82	□□□□□ -1.64
RRI1	YDL216C	SPO16	P17122	198 aa		4.81	□□□□□ -1.64
RRI1	YDL216C	GSH1	P32477	678 aa		4.81	□□□□□ -1.64
RRI1	YDL216C	TMT1	P32643	299 aa		4.81	□□□□□ -1.64
RRI1	YDL216C	VPS24	P36095	224 aa	Known RBP	4.81	□□□□□ -1.64
RRI1	YDL216C	PHM8	P40025	321 aa		4.81	□□□□□ -1.64
RRI1	YDL216C	YIL161W	P40449	235 aa	Known RBP	4.81	□□□□□ -1.64
RRI1	YDL216C	ARC35	P53731	342 aa	Known RBP	4.81	□□□□□ -1.64
RRI1	YDL216C	STP1	Q00947	519 aa		4.81	□□□□□ -1.64
RRI1	YDL216C	YDR109C	Q04585	715 aa		4.81	□□□□□ -1.64
RRI1	YDL216C	UBC1	P21734	215 aa	Known RBP	4.8	□□□□□ -1.64
RRI1	YDL216C	COQ3	P27680	312 aa		4.8	□□□□□ -1.64
RRI1	YDL216C	IES5	P40060	125 aa		4.8	□□□□□ -1.64
RRI1	YDL216C	SMK1	P41808	388 aa		4.8	□□□□□ -1.64
RRI1	YDL216C	MSY1	P48527	492 aa		4.8	□□□□□ -1.64
RRI1	YDL216C	GLO1	P50107	326 aa		4.8	□□□□□ -1.64
RRI1	YDL216C	SWT1	Q12104	458 aa		4.8	□□□□□ -1.64
RRI1	YDL216C	CRC1	Q12289	327 aa		4.8	□□□□□ -1.64
RRI1	YDL216C	RAD16	P31244	790 aa		4.79	□□□□□ -1.64
RRI1	YDL216C	MSS51	P32335	436 aa		4.79	□□□□□ -1.64
RRI1	YDL216C	ORC5	P50874	479 aa		4.79	□□□□□ -1.64
RRI1	YDL216C	CSR1	Q06705	408 aa	Known RBP	4.79	□□□□□ -1.64
RRI1	YDL216C	THI3	Q07471	609 aa		4.79	□□□□□ -1.64
RRI1	YDL216C	GET3	Q12154	354 aa	Known RBP	4.79	□□□□□ -1.64
RRI1	YDL216C	ATP2	P00830	511 aa	Known RBP	4.78	□□□□□ -1.64
RRI1	YDL216C	TPK1	P06244	397 aa		4.78	□□□□□ -1.64
RRI1	YDL216C	YML003W	P0CF16	290 aa		4.78	□□□□□ -1.64
RRI1	YDL216C	YMR085W	P0CF18	432 aa		4.78	□□□□□ -1.64
RRI1	YDL216C	ERV46	P39727	415 aa		4.78	□□□□□ -1.64
RRI1	YDL216C	CFD1	P40558	293 aa		4.78	□□□□□ -1.64
RRI1	YDL216C	DCP2	P53550	970 aa	Known RBP	4.78	□□□□□ -1.64
RRI1	YDL216C	CSL4	P53859	292 aa	Predicted RBP	4.78	□□□□□ -1.64
RRI1	YDL216C	YAP1	P19880	650 aa	Known RBP	4.77	□□□□□ -1.65
RRI1	YDL216C	RFA2	P26754	273 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms