RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C ARA2Q04212 335 aa3.31□□□□□ -1.88
ASM4YDL088C SLX4Q12098 748 aa3.31□□□□□ -1.88
ASM4YDL088C PTC6P25646 442 aa3.3□□□□□ -1.88
ASM4YDL088C YJL107CP42947 387 aa3.3□□□□□ -1.88
ASM4YDL088C POL31P46957 487 aa3.3□□□□□ -1.88
ASM4YDL088C COG6P53959 839 aa3.3□□□□□ -1.88
ASM4YDL088C YMR034CQ05131 434 aaPredicted RBP3.3□□□□□ -1.88
ASM4YDL088C GRS2Q06817 618 aa3.3□□□□□ -1.88
ASM4YDL088C PDE1P22434 369 aa3.29□□□□□ -1.88
ASM4YDL088C YCR043CP25361 127 aa3.29□□□□□ -1.88
ASM4YDL088C GSH1P32477 678 aa3.29□□□□□ -1.88
ASM4YDL088C THI3Q07471 609 aa3.29□□□□□ -1.88
ASM4YDL088C YOR111WQ99210 232 aa3.29□□□□□ -1.88
ASM4YDL088C YPT1P01123 206 aaKnown RBP3.29□□□□□ -1.88
ASM4YDL088C NIC96P34077 839 aa3.29□□□□□ -1.88
ASM4YDL088C ARC40P38328 384 aaKnown RBP3.29□□□□□ -1.88
ASM4YDL088C ARN1P38731 627 aa3.29□□□□□ -1.88
ASM4YDL088C YIL152WP40455 235 aa3.29□□□□□ -1.88
ASM4YDL088C PEX14P53112 341 aa3.29□□□□□ -1.88
ASM4YDL088C DOS2P54858 310 aa3.29□□□□□ -1.88
ASM4YDL088C CRD1Q07560 283 aa3.29□□□□□ -1.88
ASM4YDL088C LEA1Q08963 238 aaPredicted RBP3.29□□□□□ -1.88
ASM4YDL088C GRX4P32642 244 aa3.28□□□□□ -1.88
ASM4YDL088C ERC1P38767 581 aa3.28□□□□□ -1.88
ASM4YDL088C MET30P39014 640 aa3.28□□□□□ -1.88
ASM4YDL088C YIL169CP40442 995 aa3.28□□□□□ -1.88
ASM4YDL088C TES1P41903 349 aaKnown RBP3.28□□□□□ -1.88
ASM4YDL088C MLH2Q07980 695 aa3.28□□□□□ -1.88
ASM4YDL088C GSH2Q08220 491 aa3.28□□□□□ -1.88
ASM4YDL088C NDD1Q08887 554 aa3.28□□□□□ -1.88
ASM4YDL088C ADH4P10127 382 aa3.27□□□□□ -1.89
ASM4YDL088C YLF2P38746 405 aa3.27□□□□□ -1.89
ASM4YDL088C FUN12P39730 1002 aaKnown RBP3.27□□□□□ -1.89
ASM4YDL088C SAD1P43589 448 aa3.27□□□□□ -1.89
ASM4YDL088C UBX6P47049 396 aa3.27□□□□□ -1.89
ASM4YDL088C NPA3P47122 385 aa3.27□□□□□ -1.89
ASM4YDL088C VPS25P47142 202 aa3.27□□□□□ -1.89
ASM4YDL088C ESF2P53743 316 aaKnown RBP3.27□□□□□ -1.89
ASM4YDL088C PDR8Q06149 701 aa3.27□□□□□ -1.89
ASM4YDL088C NRT1Q08485 598 aa3.27□□□□□ -1.89
ASM4YDL088C LAC1P28496 418 aa3.26□□□□□ -1.89
ASM4YDL088C UBP7P40453 1071 aa3.26□□□□□ -1.89
ASM4YDL088C AAD4Q07747 329 aa3.26□□□□□ -1.89
ASM4YDL088C RPL42AP0CX27 106 aaKnown RBP3.25□□□□□ -1.89
ASM4YDL088C RPL42BP0CX28 106 aaKnown RBP3.25□□□□□ -1.89
ASM4YDL088C ENP1P38333 483 aaKnown RBP3.25□□□□□ -1.89
ASM4YDL088C SWD1P39706 426 aa3.25□□□□□ -1.89
ASM4YDL088C IMA5P40884 581 aa3.25□□□□□ -1.89
ASM4YDL088C ASK10P48361 1146 aa3.25□□□□□ -1.89
ASM4YDL088C AIM6Q07716 390 aa3.25□□□□□ -1.89
ASM4YDL088C YBR255C-AQ3E776 120 aa3.25□□□□□ -1.89
ASM4YDL088C COX1P00401 534 aa3.25□□□□□ -1.89
ASM4YDL088C YGL260WP53056 76 aa3.25□□□□□ -1.89
ASM4YDL088C YPR003CP53394 754 aa3.25□□□□□ -1.89
ASM4YDL088C GIS2P53849 153 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
ASM4YDL088C VRG4P40107 337 aa3.24□□□□□ -1.89
ASM4YDL088C UBP8P50102 471 aa3.24□□□□□ -1.89
ASM4YDL088C CNM67P53865 581 aaKnown RBP3.24□□□□□ -1.89
ASM4YDL088C DIG1Q03063 452 aaKnown RBP3.24□□□□□ -1.89
ASM4YDL088C MCH4Q08268 501 aa3.24□□□□□ -1.89
ASM4YDL088C OCT1P35999 772 aa3.23□□□□□ -1.89
ASM4YDL088C RTT107P38850 1070 aa3.23□□□□□ -1.89
ASM4YDL088C PUS4P48567 403 aaKnown RBP3.23□□□□□ -1.89
ASM4YDL088C YGL036WP53185 909 aaPredicted RBP3.23□□□□□ -1.89
ASM4YDL088C YPL108WQ02872 168 aaPredicted RBP3.23□□□□□ -1.89
ASM4YDL088C YDR109CQ04585 715 aa3.23□□□□□ -1.89
ASM4YDL088C SUI3P09064 285 aaKnown RBP3.22□□□□□ -1.89
ASM4YDL088C YCR006CP25350 157 aa3.22□□□□□ -1.89
ASM4YDL088C TPA1P40032 644 aaKnown RBP3.22□□□□□ -1.89
ASM4YDL088C YRB30P53107 440 aaPredicted RBP3.22□□□□□ -1.89
ASM4YDL088C YGR079WP53249 370 aa3.22□□□□□ -1.89
ASM4YDL088C IZH1Q03419 316 aa3.22□□□□□ -1.89
ASM4YDL088C ICL2Q12031 575 aa3.22□□□□□ -1.89
ASM4YDL088C BET4Q00618 327 aa3.21□□□□□ -1.89
ASM4YDL088C YLR281CQ05863 155 aa3.21□□□□□ -1.89
ASM4YDL088C YLR112WQ12130 139 aa3.21□□□□□ -1.89
ASM4YDL088C RVB2Q12464 471 aaKnown RBP3.21□□□□□ -1.89
ASM4YDL088C YFL068WP0CX99 160 aa3.21□□□□□ -1.9
ASM4YDL088C YLL066W-AP0CY00 160 aa3.21□□□□□ -1.9
ASM4YDL088C YLL067W-AP0CY01 160 aa3.21□□□□□ -1.9
ASM4YDL088C HES1P35843 434 aa3.21□□□□□ -1.9
ASM4YDL088C CAB2P40506 365 aa3.21□□□□□ -1.9
ASM4YDL088C QRI7P43122 407 aa3.21□□□□□ -1.9
ASM4YDL088C FOL1P53848 824 aa3.21□□□□□ -1.9
ASM4YDL088C POS5Q06892 414 aa3.21□□□□□ -1.9
ASM4YDL088C ARP7Q12406 477 aa3.21□□□□□ -1.9
ASM4YDL088C PHO2P07269 559 aa3.2□□□□□ -1.9
ASM4YDL088C RKM3P38222 552 aa3.2□□□□□ -1.9
ASM4YDL088C PAF1P38351 445 aa3.2□□□□□ -1.9
ASM4YDL088C CDC1P40986 491 aa3.2□□□□□ -1.9
ASM4YDL088C SKP2P42843 763 aa3.2□□□□□ -1.9
ASM4YDL088C FMP42Q04991 504 aa3.2□□□□□ -1.9
ASM4YDL088C YTH1Q06102 208 aaPredicted RBP3.2□□□□□ -1.9
ASM4YDL088C GPN2Q08726 347 aaPredicted RBP3.2□□□□□ -1.9
ASM4YDL088C MNN2P38069 597 aa3.19□□□□□ -1.9
ASM4YDL088C VPS41P38959 992 aa3.19□□□□□ -1.9
ASM4YDL088C PCL6P40038 420 aa3.19□□□□□ -1.9
ASM4YDL088C ATG21Q02887 496 aa3.19□□□□□ -1.9
ASM4YDL088C ECM16Q04217 1267 aaKnown RBP3.19□□□□□ -1.9
ASM4YDL088C SWF1Q04629 336 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms