RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W KAR1P11927 433 aa2.64□□□□□ -1.99
CDC50YCR094W PGI1P12709 554 aaKnown RBP2.64□□□□□ -1.99
CDC50YCR094W CBP3P21560 335 aa2.64□□□□□ -1.99
CDC50YCR094W TRX2P22803 104 aaKnown RBP2.64□□□□□ -1.99
CDC50YCR094W RKM3P38222 552 aa2.64□□□□□ -1.99
CDC50YCR094W VPS8P39702 1274 aa2.64□□□□□ -1.99
CDC50YCR094W SQS1P53866 767 aaKnown RBP2.64□□□□□ -1.99
CDC50YCR094W IMP4P53941 290 aaKnown RBP2.64□□□□□ -1.99
CDC50YCR094W UBX4P54730 416 aa2.64□□□□□ -1.99
CDC50YCR094W UBP16Q02863 499 aa2.64□□□□□ -1.99
CDC50YCR094W VPS72Q03388 795 aa2.64□□□□□ -1.99
CDC50YCR094W ATG16Q03818 150 aa2.64□□□□□ -1.99
CDC50YCR094W YLR281CQ05863 155 aa2.64□□□□□ -1.99
CDC50YCR094W YDL121CQ07541 149 aa2.64□□□□□ -1.99
CDC50YCR094W APM4Q99186 491 aa2.64□□□□□ -1.99
CDC50YCR094W PRP16P15938 1071 aaPredicted RBP2.63□□□□□ -1.99
CDC50YCR094W YEF3P16521 1044 aaKnown RBP2.63□□□□□ -1.99
CDC50YCR094W DGR2P32330 852 aa2.63□□□□□ -1.99
CDC50YCR094W DID4P36108 232 aa2.63□□□□□ -1.99
CDC50YCR094W MAM1P40065 302 aa2.63□□□□□ -1.99
CDC50YCR094W SPC105P53148 917 aa2.63□□□□□ -1.99
CDC50YCR094W YGR021WP53212 290 aa2.63□□□□□ -1.99
CDC50YCR094W PEF1P53238 335 aa2.63□□□□□ -1.99
CDC50YCR094W FMP42Q04991 504 aa2.63□□□□□ -1.99
CDC50YCR094W PHM6Q05637 104 aa2.63□□□□□ -1.99
CDC50YCR094W GPN2Q08726 347 aaPredicted RBP2.63□□□□□ -1.99
CDC50YCR094W TIP41Q12199 356 aa2.63□□□□□ -1.99
CDC50YCR094W NYV1Q12255 253 aa2.63□□□□□ -1.99
CDC50YCR094W CDC23P16522 626 aa2.62□□□□□ -1.99
CDC50YCR094W APA1P16550 321 aaKnown RBP2.62□□□□□ -1.99
CDC50YCR094W NIC96P34077 839 aa2.62□□□□□ -1.99
CDC50YCR094W EXO84P38261 753 aa2.62□□□□□ -1.99
CDC50YCR094W QRI7P43122 407 aa2.62□□□□□ -1.99
CDC50YCR094W ORC5P50874 479 aa2.62□□□□□ -1.99
CDC50YCR094W ECM38Q05902 660 aaPredicted RBP2.62□□□□□ -1.99
CDC50YCR094W RSA1Q08932 381 aa2.62□□□□□ -1.99
CDC50YCR094W RMP1Q12530 201 aa2.62□□□□□ -1.99
CDC50YCR094W COX11P19516 300 aaKnown RBP2.61□□□□□ -1.99
CDC50YCR094W ATP12P22135 325 aa2.61□□□□□ -1.99
CDC50YCR094W PTP2P29461 750 aa2.61□□□□□ -1.99
CDC50YCR094W HXT4P32467 576 aa2.61□□□□□ -1.99
CDC50YCR094W ARN1P38731 627 aa2.61□□□□□ -1.99
CDC50YCR094W PCL6P40038 420 aa2.61□□□□□ -1.99
CDC50YCR094W FCP1Q03254 732 aa2.61□□□□□ -1.99
CDC50YCR094W SKY1Q03656 742 aa2.61□□□□□ -1.99
CDC50YCR094W YML053CQ04978 212 aa2.61□□□□□ -1.99
CDC50YCR094W YLR352WQ06479 807 aa2.61□□□□□ -1.99
CDC50YCR094W MLC2Q06580 163 aa2.61□□□□□ -1.99
CDC50YCR094W YPR027CQ12079 277 aa2.61□□□□□ -1.99
CDC50YCR094W RRP6Q12149 733 aaKnown RBP2.61□□□□□ -1.99
CDC50YCR094W NKP1Q12493 238 aa2.61□□□□□ -1.99
CDC50YCR094W SES1P07284 462 aaKnown RBP2.6□□□□□ -1.99
CDC50YCR094W MSS18P08593 268 aa2.6□□□□□ -1.99
CDC50YCR094W GSH1P32477 678 aa2.6□□□□□ -1.99
CDC50YCR094W YHL041WP38730 149 aa2.6□□□□□ -1.99
CDC50YCR094W BZZ1P38822 633 aa2.6□□□□□ -1.99
CDC50YCR094W NAB3P38996 802 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
CDC50YCR094W UBP7P40453 1071 aa2.6□□□□□ -1.99
CDC50YCR094W AZF1P41696 914 aa2.6□□□□□ -1.99
CDC50YCR094W CEG1Q01159 459 aaPredicted RBP2.6□□□□□ -1.99
CDC50YCR094W PTA1Q01329 785 aaPredicted RBP2.6□□□□□ -1.99
CDC50YCR094W VMS1Q04311 632 aaKnown RBP2.6□□□□□ -1.99
CDC50YCR094W SAN1P22470 610 aa2.59□□□□□ -1.99
CDC50YCR094W MNN2P38069 597 aa2.59□□□□□ -1.99
CDC50YCR094W FAA2P39518 744 aa2.59□□□□□ -1.99
CDC50YCR094W RPT2P40327 437 aaKnown RBP2.59□□□□□ -1.99
CDC50YCR094W ROK1P45818 564 aaPredicted RBP2.59□□□□□ -1.99
CDC50YCR094W COS12P53053 380 aa2.59□□□□□ -1.99
CDC50YCR094W CNM67P53865 581 aaKnown RBP2.59□□□□□ -1.99
CDC50YCR094W YAT1P80235 687 aa2.59□□□□□ -1.99
CDC50YCR094W CIA1Q05583 330 aa2.59□□□□□ -1.99
CDC50YCR094W BRE1Q07457 700 aaKnown RBP2.59□□□□□ -1.99
CDC50YCR094W YDL242WQ07746 117 aa2.59□□□□□ -1.99
CDC50YCR094W PEX15Q08215 383 aa2.59□□□□□ -1.99
CDC50YCR094W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
CDC50YCR094W SEC1P30619 724 aaKnown RBP2.58□□□□□ -2
CDC50YCR094W YKL133CP36066 463 aa2.58□□□□□ -2
CDC50YCR094W EMP65P40085 556 aa2.58□□□□□ -2
CDC50YCR094W HIS6P40545 261 aa2.58□□□□□ -2
CDC50YCR094W PUS4P48567 403 aaKnown RBP2.58□□□□□ -2
CDC50YCR094W SLD3P53135 668 aa2.58□□□□□ -2
CDC50YCR094W CRZ1P53968 678 aa2.58□□□□□ -2
CDC50YCR094W TMA64Q04600 565 aaKnown RBP2.58□□□□□ -2
CDC50YCR094W NGL1Q08213 363 aaKnown RBP2.58□□□□□ -2
CDC50YCR094W DPB3P27344 201 aa2.57□□□□□ -2
CDC50YCR094W DBF20P32328 564 aa2.57□□□□□ -2
CDC50YCR094W MRS6P32864 603 aaKnown RBP2.57□□□□□ -2
CDC50YCR094W ACA1P39970 489 aa2.57□□□□□ -2
CDC50YCR094W EAF5P39995 279 aa2.57□□□□□ -2
CDC50YCR094W VID27P40157 782 aa2.57□□□□□ -2
CDC50YCR094W ERR3P42222 437 aa2.57□□□□□ -2
CDC50YCR094W RNR4P49723 345 aaKnown RBP2.57□□□□□ -2
CDC50YCR094W MOT3P54785 490 aaKnown RBP2.57□□□□□ -2
CDC50YCR094W IZH1Q03419 316 aa2.57□□□□□ -2
CDC50YCR094W APL5Q08951 932 aaKnown RBP2.57□□□□□ -2
CDC50YCR094W YLR112WQ12130 139 aa2.57□□□□□ -2
CDC50YCR094W CWH43P25618 953 aa2.56□□□□□ -2
CDC50YCR094W VPS41P38959 992 aa2.56□□□□□ -2
CDC50YCR094W ASG1P40467 964 aa2.56□□□□□ -2
CDC50YCR094W SAP185P40856 1058 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 118.2 ms