RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W PCD1Q12524 340 aa5.38□□□□□ -1.55
CKS1YBR135W YBR255C-AQ3E776 120 aa5.38□□□□□ -1.55
CKS1YBR135W TY1B-JR2P47100 1755 aaKnown RBP5.37□□□□□ -1.55
CKS1YBR135W TY1B-ER2Q03619 1755 aa5.37□□□□□ -1.55
CKS1YBR135W TY1B-MR1Q04214 1755 aa5.37□□□□□ -1.55
CKS1YBR135W TY1B-MR2Q04670 1755 aaKnown RBP5.37□□□□□ -1.55
CKS1YBR135W TY1B-LR1Q12088 1755 aaKnown RBP5.37□□□□□ -1.55
CKS1YBR135W TY1B-NL1Q12112 1755 aa5.37□□□□□ -1.55
CKS1YBR135W TY1B-GR1Q12141 1755 aa5.37□□□□□ -1.55
CKS1YBR135W TY1B-BLQ12490 1755 aa5.37□□□□□ -1.55
CKS1YBR135W AAC1P04710 309 aa5.37□□□□□ -1.55
CKS1YBR135W TPK2P06245 380 aa5.37□□□□□ -1.55
CKS1YBR135W YPK1P12688 680 aaKnown RBP5.37□□□□□ -1.55
CKS1YBR135W DMC1P25453 334 aa5.37□□□□□ -1.55
CKS1YBR135W SWC3P31376 625 aa5.37□□□□□ -1.55
CKS1YBR135W TEF4P36008 412 aaKnown RBP5.37□□□□□ -1.55
CKS1YBR135W UME6P39001 836 aa5.37□□□□□ -1.55
CKS1YBR135W ZAP1P47043 880 aa5.37□□□□□ -1.55
CKS1YBR135W COQ6P53318 479 aa5.37□□□□□ -1.55
CKS1YBR135W CSL4P53859 292 aaPredicted RBP5.37□□□□□ -1.55
CKS1YBR135W MRH1Q12117 320 aaPredicted RBP5.37□□□□□ -1.55
CKS1YBR135W ZPS1Q12512 249 aa5.37□□□□□ -1.55
CKS1YBR135W YER175W-AQ8TGU4 54 aa5.37□□□□□ -1.55
CKS1YBR135W DRS2P39524 1355 aa5.37□□□□□ -1.55
CKS1YBR135W MYO4P32492 1471 aa5.37□□□□□ -1.55
CKS1YBR135W RPO21P04050 1733 aaKnown RBP5.37□□□□□ -1.55
CKS1YBR135W CPA2P03965 1118 aaKnown RBP5.36□□□□□ -1.55
CKS1YBR135W TPK1P06244 397 aa5.36□□□□□ -1.55
CKS1YBR135W WHI2P12611 486 aa5.36□□□□□ -1.55
CKS1YBR135W CDC43P18898 376 aa5.36□□□□□ -1.55
CKS1YBR135W URK1P27515 501 aa5.36□□□□□ -1.55
CKS1YBR135W GCD7P32502 381 aaPredicted RBP5.36□□□□□ -1.55
CKS1YBR135W MTH1P35198 433 aa5.36□□□□□ -1.55
CKS1YBR135W BUD16P39988 312 aa5.36□□□□□ -1.55
CKS1YBR135W YER010CP40011 234 aa5.36□□□□□ -1.55
CKS1YBR135W YGL117WP53133 265 aa5.36□□□□□ -1.55
CKS1YBR135W CPR8P53728 308 aa5.36□□□□□ -1.55
CKS1YBR135W CRT10Q08226 957 aa5.36□□□□□ -1.55
CKS1YBR135W PNS1Q12412 539 aa5.36□□□□□ -1.55
CKS1YBR135W YOL087CQ99247 1116 aa5.36□□□□□ -1.55
CKS1YBR135W YRF1-1P0CX20 1796 aa5.36□□□□□ -1.55
CKS1YBR135W YRF1-5P0CX21 1796 aa5.36□□□□□ -1.55
CKS1YBR135W YRF1-8P0CX22 1796 aa5.36□□□□□ -1.55
CKS1YBR135W BNI1P41832 1953 aa5.36□□□□□ -1.55
CKS1YBR135W PFK2P16862 959 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
CKS1YBR135W KGD2P19262 463 aaPredicted RBP5.35□□□□□ -1.55
CKS1YBR135W PDE1P22434 369 aa5.35□□□□□ -1.55
CKS1YBR135W CHS3P29465 1165 aa5.35□□□□□ -1.55
CKS1YBR135W CBF2P32504 956 aa5.35□□□□□ -1.55
CKS1YBR135W MUP3P38734 546 aa5.35□□□□□ -1.55
CKS1YBR135W LNP1P38878 278 aa5.35□□□□□ -1.55
CKS1YBR135W MNT3P40549 630 aa5.35□□□□□ -1.55
CKS1YBR135W YDR056CQ12025 205 aa5.35□□□□□ -1.55
CKS1YBR135W RRI2Q12348 645 aa5.35□□□□□ -1.55
CKS1YBR135W PNO1Q99216 274 aaKnown RBP5.35□□□□□ -1.55
CKS1YBR135W CHO2P05374 869 aaKnown RBP5.34□□□□□ -1.55
CKS1YBR135W TY2A-LR1P0C2J4 438 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-FP0CX61 438 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-GR2P0CX62 438 aa5.34□□□□□ -1.55
CKS1YBR135W RNR3P21672 869 aaKnown RBP5.34□□□□□ -1.55
CKS1YBR135W AMD2P22580 549 aa5.34□□□□□ -1.55
CKS1YBR135W GFD2P25370 566 aaKnown RBP5.34□□□□□ -1.55
CKS1YBR135W TY2A-CP25383 438 aa5.34□□□□□ -1.55
CKS1YBR135W CNS1P33313 385 aa5.34□□□□□ -1.55
CKS1YBR135W NUP120P35729 1037 aa5.34□□□□□ -1.55
CKS1YBR135W VPS8P39702 1274 aa5.34□□□□□ -1.55
CKS1YBR135W MAM1P40065 302 aa5.34□□□□□ -1.55
CKS1YBR135W DPH1P40487 425 aaKnown RBP5.34□□□□□ -1.55
CKS1YBR135W SKP2P42843 763 aa5.34□□□□□ -1.55
CKS1YBR135W ASN1P49089 572 aaKnown RBP5.34□□□□□ -1.55
CKS1YBR135W COG1P53079 417 aa5.34□□□□□ -1.55
CKS1YBR135W MTG1Q03151 367 aaPredicted RBP5.34□□□□□ -1.55
CKS1YBR135W YML119WQ03208 357 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-DR2Q03483 438 aa5.34□□□□□ -1.55
CKS1YBR135W GTB1Q04924 702 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-BQ12260 438 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-OR2Q12293 438 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-DR1Q12392 438 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-OR1Q12439 438 aa5.34□□□□□ -1.55
CKS1YBR135W TY2A-DR3Q99303 438 aa5.34□□□□□ -1.55
CKS1YBR135W MMS1Q06211 1407 aa5.33□□□□□ -1.56
CKS1YBR135W EMP70P32802 667 aa5.33□□□□□ -1.56
CKS1YBR135W GEX2P36173 615 aa5.33□□□□□ -1.56
CKS1YBR135W VPS73P53142 486 aaKnown RBP5.33□□□□□ -1.56
CKS1YBR135W IMO32P53219 342 aa5.33□□□□□ -1.56
CKS1YBR135W GFD1Q04839 188 aaKnown RBP5.33□□□□□ -1.56
CKS1YBR135W SNO4Q04902 237 aa5.33□□□□□ -1.56
CKS1YBR135W COG4Q06096 861 aa5.33□□□□□ -1.56
CKS1YBR135W HSP33Q08914 237 aaKnown RBP5.33□□□□□ -1.56
CKS1YBR135W PCL8Q08966 492 aa5.33□□□□□ -1.56
CKS1YBR135W HSP32Q08992 237 aa5.33□□□□□ -1.56
CKS1YBR135W ATP2P00830 511 aaKnown RBP5.32□□□□□ -1.56
CKS1YBR135W STE12P13574 688 aa5.32□□□□□ -1.56
CKS1YBR135W GDA1P32621 518 aa5.32□□□□□ -1.56
CKS1YBR135W RIC1P40395 1056 aa5.32□□□□□ -1.56
CKS1YBR135W IST3P40565 148 aaPredicted RBP5.32□□□□□ -1.56
CKS1YBR135W CBK1P53894 756 aa5.32□□□□□ -1.56
CKS1YBR135W STP3Q05937 343 aa5.32□□□□□ -1.56
CKS1YBR135W MRI1Q06489 411 aaKnown RBP5.32□□□□□ -1.56
CKS1YBR135W YDL242WQ07746 117 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms