RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ARMT1Q9H993 441 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 LRP6O75581 1613 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 CASP1P29466 404 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 TXLNAP40222 546 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 RBL2Q08999 1139 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 ALX1Q15699 326 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 HLFQ16534 295 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 LONRF2Q1L5Z9 754 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 APTXQ7Z2E3 356 aaKnown RBP12.45□□□□□ -0.42
SNIP1-204ENST00000638725 HELBQ8NG08 1087 aaPredicted RBP12.45□□□□□ -0.42
SNIP1-204ENST00000638725 PUF60Q9UHX1 559 aaKnown RBP12.45□□□□□ -0.42
SNIP1-204ENST00000638725 SRPRBQ9Y5M8 271 aaKnown RBP12.45□□□□□ -0.42
SNIP1-204ENST00000638725 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
SNIP1-204ENST00000638725 A0A087X0B3 334 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
SNIP1-204ENST00000638725 PDE8BO95263 885 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 CAPN2P17655 700 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
SNIP1-204ENST00000638725 CTSWP56202 376 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 CHMP4BP1P59074 171 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 AKNAD1Q5T1N1 836 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 DNAJC10Q8IXB1 793 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 MAGEB6Q8N7X4 407 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 CABP5Q9NP86 173 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 H3BQF6 201 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 TULP2O00295 520 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 PRKAB2O43741 272 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
SNIP1-204ENST00000638725 AFMP43652 599 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 TXLNBQ8N3L3 684 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
SNIP1-204ENST00000638725 SPATA20Q8TB22 786 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 ZBTB9Q96C00 473 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 PANX2Q96RD6 677 aa12.44□□□□□ -0.42
SNIP1-204ENST00000638725 DEXIO95424 95 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 ERCC5P28715 1186 aaPredicted RBP12.43□□□□□ -0.42
SNIP1-204ENST00000638725 WTAPQ15007 396 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 MFSD6Q6ZSS7 791 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 SRGAP1Q7Z6B7 1085 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 NUP133Q8WUM0 1156 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 CCDC151A5D8V7 595 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 NKX1-1Q15270 411 aaPredicted RBP12.43□□□□□ -0.42
SNIP1-204ENST00000638725 KANK3Q6NY19 840 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 GIGYF2Q6Y7W6 1299 aaKnown RBP12.43□□□□□ -0.42
SNIP1-204ENST00000638725 NLRP10Q86W26 655 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 PPFIBP1Q86W92 1011 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 SMYD4Q8IYR2 804 aaPredicted RBP12.43□□□□□ -0.42
SNIP1-204ENST00000638725 CRACR2BQ8N4Y2 399 aaPredicted RBP12.43□□□□□ -0.42
SNIP1-204ENST00000638725 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
SNIP1-204ENST00000638725 EPSTI1Q96J88 318 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 ANKZF1Q9H8Y5 726 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 WDR17Q8IZU2 1322 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 CDHR2Q9BYE9 1310 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 SYNRGQ9UMZ2 1314 aa12.43□□□□□ -0.42
SNIP1-204ENST00000638725 GSG1L2A8MUP6 293 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 SNAP23O00161 211 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 TFRCP02786 760 aaKnown RBP12.42□□□□□ -0.42
SNIP1-204ENST00000638725 UQCRFS1P1P0C7P4 283 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
SNIP1-204ENST00000638725 SPATA1Q5VX52 437 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 KRT23Q9C075 422 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 NID2Q14112 1375 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 CHD4Q14839 1912 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
SNIP1-204ENST00000638725 PBX1P40424 430 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 RAD51AP2Q09MP3 1159 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 ZNF569Q5MCW4 686 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 SHISA4Q96DD7 197 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 ADD3Q9UEY8 706 aaKnown RBP12.42□□□□□ -0.42
SNIP1-204ENST00000638725 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
SNIP1-204ENST00000638725 MAP2K7O14733 419 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 KIF5CO60282 957 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 MFAP3LO75121 409 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 CASP14P31944 242 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 TDO2P48775 406 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 GPS2Q13227 327 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 CUL4BQ13620 913 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 BRD3Q15059 726 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 SPATA5Q8NB90 893 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 PRDM11Q9NQV5 511 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 CDC23Q9UJX2 597 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 COBLO75128 1261 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 RASGRF1Q13972 1273 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
SNIP1-204ENST00000638725 EARS2Q5JPH6 523 aaKnown RBP12.41□□□□□ -0.42
SNIP1-204ENST00000638725 ZNF654Q8IZM8 581 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 ACRBPQ8NEB7 543 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 PNKPQ96T60 521 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 ADAM21Q9UKJ8 722 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
SNIP1-204ENST00000638725 ERICH2A1L162 156 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms