RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 POLLQ9UGP5 575 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 RTL9Q8NET4 1388 aa11.14□□□□□ -0.63
CACNA1A-248ENST00000637774 SALL1Q9NSC2 1324 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 PLCH1Q4KWH8 1693 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 BBOX1O75936 387 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 CLCN1P35523 988 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 AFMP43652 599 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 PLCD1P51178 756 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 BRIP1Q9BX63 1249 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 TRIM34Q9BYJ4 488 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 NAT10Q9H0A0 1025 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 ARPP21Q9UBL0 812 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 TUBGCP6Q96RT7 1819 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 CTAGE5O15320 804 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 WDHD1O75717 1129 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 ADRA2BP18089 450 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 CACNB3P54284 484 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 EVCP57679 992 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 NTRK3Q16288 839 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 PIK3AP1Q6ZUJ8 805 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 NLGN1Q8N2Q7 840 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 PNMA1Q8ND90 353 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 TBC1D16Q8TBP0 767 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 RASGRP4Q8TDF6 673 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 STAMQ92783 540 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 TAF1P21675 1872 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 YEATS4O95619 227 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 MCM7P33993 719 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 KLHL10Q6JEL2 608 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 CCDC186Q7Z3E2 898 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 PCDHB6Q9Y5E3 794 aa11.13□□□□□ -0.63
CACNA1A-248ENST00000637774 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 ZKSCAN5Q9Y2L8 839 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 POLR2DO15514 142 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 PTGS1P23219 599 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 KIF5BP33176 963 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 PNOCQ13519 176 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 SLC39A14Q15043 492 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 CLIP2Q9UDT6 1046 aa11.12□□□□□ -0.63
CACNA1A-248ENST00000637774 TRIM75PA6NK02 468 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 MMP1P03956 469 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 RXRBP28702 533 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 CHRNA5P30532 468 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 KRT2P35908 639 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 TPM4P67936 248 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 RBM6P78332 1123 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 IKQ13123 557 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 PROM2Q8N271 834 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 TDRD7Q8NHU6 1098 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 DHX58Q96C10 678 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 EYA3Q99504 573 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 NOL7Q9UMY1 257 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 VWA3AA6NCI4 1184 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 EN1Q05925 392 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 RASGRP2Q7LDG7 609 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 KCNH3Q9ULD8 1083 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 WDR19Q8NEZ3 1342 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 C2CD5Q86YS7 1000 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 PLIN2Q99541 437 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
CACNA1A-248ENST00000637774 PAPPAQ13219 1627 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 GRIN1Q05586 938 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 DHX8Q14562 1220 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 PTPN21Q16825 1174 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 DPCR1Q3MIW9 517 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 SLF2Q8IX21 1173 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 GRAMD1CQ8IYS0 662 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 ZNF592Q92610 1267 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 ZNF287Q9HBT7 754 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 USP40Q9NVE5 1235 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 COL1A1P02452 1464 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 POLRMTO00411 1230 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 AP5Z1O43299 807 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 CALM1P0DP23 149 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 CALM2P0DP24 149 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 CALM3P0DP25 149 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 VEGFAP15692 232 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 CDC25AP30304 524 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 SNW1Q13573 536 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 RILPL1Q5EBL4 403 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 LRRC47Q8N1G4 583 aaKnown RBP11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 MARCH6O60337 910 aa11.1□□□□□ -0.63
CACNA1A-248ENST00000637774 SERPINC1P01008 464 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms