RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLN5-213ENST00000636681 TM6SF1Q9BZW5 370 aa12.6□□□□□ -0.39
CLN5-213ENST00000636681 DHX36Q9H2U1 1008 aaKnown RBP12.6□□□□□ -0.39
CLN5-213ENST00000636681 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLN5-213ENST00000636681 PAPPA2Q9BXP8 1791 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 ORC4O43929 436 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 LARGE1O95461 756 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 PDE4BQ07343 736 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 TNFAIP1Q13829 316 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 EHD4Q9H223 541 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 CYP46A1Q9Y6A2 500 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 PITPNM2Q9BZ72 1349 aa12.59□□□□□ -0.39
CLN5-213ENST00000636681 KRT32Q14532 448 aa12.58□□□□□ -0.39
CLN5-213ENST00000636681 RABEP1Q15276 862 aa12.58□□□□□ -0.39
CLN5-213ENST00000636681 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.39
CLN5-213ENST00000636681 RASGRP2Q7LDG7 609 aa12.58□□□□□ -0.39
CLN5-213ENST00000636681 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.39
CLN5-213ENST00000636681 DOCK1Q14185 1865 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
CLN5-213ENST00000636681 PHIPQ8WWQ0 1821 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 INPP5BP32019 993 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 GUCY1A2P33402 732 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 TRDNQ13061 729 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 TATDN1Q6P1N9 297 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
CLN5-213ENST00000636681 FOXP4Q8IVH2 680 aaPredicted RBP12.58□□□□□ -0.4
CLN5-213ENST00000636681 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 IGDCC4Q8TDY8 1250 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 BRF1Q92994 677 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 KRT23Q9C075 422 aa12.58□□□□□ -0.4
CLN5-213ENST00000636681 RNF41Q9H4P4 317 aaPredicted RBP12.58□□□□□ -0.4
CLN5-213ENST00000636681 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 PHF20L1A8MW92 1017 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 MPHOSPH10O00566 681 aaKnown RBP12.57□□□□□ -0.4
CLN5-213ENST00000636681 SLC3A2P08195 630 aaKnown RBP12.57□□□□□ -0.4
CLN5-213ENST00000636681 PSMA5P28066 241 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 MCM5P33992 734 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 RCSD1Q6JBY9 416 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 ZNF444Q8N0Y2 327 aaPredicted RBP12.57□□□□□ -0.4
CLN5-213ENST00000636681 ENAHQ8N8S7 591 aaPredicted RBP12.57□□□□□ -0.4
CLN5-213ENST00000636681 ESR2Q92731 530 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 MYL10Q9BUA6 226 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 BRPF3Q9ULD4 1205 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 TRPM7Q96QT4 1865 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 TNKSO95271 1327 aa12.57□□□□□ -0.4
CLN5-213ENST00000636681 SH2B2O14492 632 aaPredicted RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 GH2P01242 217 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 RXRAP19793 462 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 SEPT2Q15019 361 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 SEC23AQ15436 765 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 CERKLQ49MI3 558 aaPredicted RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 ZC3H15Q8WU90 426 aaKnown RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 CNNM2Q9H8M5 875 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 ZNF408Q9H9D4 720 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 LY9Q9HBG7 655 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 TPCN1Q9ULQ1 816 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 KIF3CO14782 793 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 MAP3K10Q02779 954 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 STK3Q13188 491 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 SIAH1Q8IUQ4 282 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 GPBP1L1Q9HC44 474 aaPredicted RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 SWAP70Q9UH65 585 aa12.56□□□□□ -0.4
CLN5-213ENST00000636681 HERC5Q9UII4 1024 aaKnown RBP12.56□□□□□ -0.4
CLN5-213ENST00000636681 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
CLN5-213ENST00000636681 ST3GAL1Q11201 340 aa12.55□□□□□ -0.4
CLN5-213ENST00000636681 CDC37L1Q7L3B6 337 aa12.55□□□□□ -0.4
CLN5-213ENST00000636681 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
CLN5-213ENST00000636681 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
CLN5-213ENST00000636681 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
CLN5-213ENST00000636681 ZSCAN10Q96SZ4 725 aaPredicted RBP12.55□□□□□ -0.4
CLN5-213ENST00000636681 MTMR7Q9Y216 660 aa12.55□□□□□ -0.4
CLN5-213ENST00000636681 IGKV6D-41A0A0C4DH26 115 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 TBC1D12O60347 775 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 DGKZQ13574 1117 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 RAB3GAP1Q15042 981 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 ME3Q16798 604 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 ABCB5Q2M3G0 1257 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 WRNIP1Q96S55 665 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
CLN5-213ENST00000636681 NAP1L2Q9ULW6 460 aaPredicted RBP12.54□□□□□ -0.4
CLN5-213ENST00000636681 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
CLN5-213ENST00000636681 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
CLN5-213ENST00000636681 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
CLN5-213ENST00000636681 CAP2P40123 477 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 FGD1P98174 961 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms